RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 SCN4AP35499 1836 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 ERVV-1B6SEH8 477 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 SRGNP10124 158 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 MYL6BP14649 208 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 VIPR1P32241 457 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 TEKQ02763 1124 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 LMOD3Q0VAK6 560 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 SEPT6Q14141 434 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 PUM1Q14671 1186 aaKnown RBP eCLIP6.95□□□□□ -1.3
CD46-211ENST00000464082 SLC6A19Q695T7 634 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 NLRX1Q86UT6 975 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 ZNF34Q8IZ26 560 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 ANKS4BQ8N8V4 417 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 CNBD1Q8NA66 436 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 G6PC3Q9BUM1 346 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 NIP7Q9Y221 180 aaKnown RBP eCLIP6.95□□□□□ -1.3
CD46-211ENST00000464082 PCDHB5Q9Y5E4 795 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 COL4A5P29400 1685 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 A0A1B0GUL6 1792 aa6.95□□□□□ -1.3
CD46-211ENST00000464082 ZNF646O15015 1829 aaPredicted RBP6.94□□□□□ -1.3
CD46-211ENST00000464082 PSME4Q14997 1843 aa6.94□□□□□ -1.3
CD46-211ENST00000464082 N4BP3O15049 544 aa6.94□□□□□ -1.3
CD46-211ENST00000464082 TREHO43280 583 aa6.94□□□□□ -1.3
CD46-211ENST00000464082 NTSR2O95665 410 aa6.94□□□□□ -1.3
CD46-211ENST00000464082 EIF2S2P20042 333 aaKnown RBP6.94□□□□□ -1.3
CD46-211ENST00000464082 SDHBP21912 280 aa6.94□□□□□ -1.3
CD46-211ENST00000464082 C1QTNF8P60827 252 aa6.94□□□□□ -1.3
CD46-211ENST00000464082 C9orf131Q5VYM1 1079 aa6.94□□□□□ -1.3
CD46-211ENST00000464082 TTBK2Q6IQ55 1244 aa6.94□□□□□ -1.3
CD46-211ENST00000464082 TMEFF1Q8IYR6 380 aa6.94□□□□□ -1.3
CD46-211ENST00000464082 NGEFQ8N5V2 710 aa6.94□□□□□ -1.3
CD46-211ENST00000464082 TTLL6Q8N841 843 aa6.94□□□□□ -1.3
CD46-211ENST00000464082 TEPSINQ96N21 525 aa6.94□□□□□ -1.3
CD46-211ENST00000464082 POLR2AP24928 1970 aaKnown RBP6.93□□□□□ -1.3
CD46-211ENST00000464082 ADAMTSL1Q8N6G6 1762 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 SHISA3A0PJX4 238 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 H0YIN7 160 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 IRS4O14654 1257 aaPredicted RBP6.93□□□□□ -1.3
CD46-211ENST00000464082 GPTP24298 496 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 PLP2Q04941 152 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 DUSP4Q13115 394 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 SPATS1Q496A3 300 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 CRY2Q49AN0 593 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 SUSD4Q5VX71 490 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 STYK1Q6J9G0 422 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 NBPF5PQ86XG9 351 aaPredicted RBP6.93□□□□□ -1.3
CD46-211ENST00000464082 MCATQ8IVS2 390 aaKnown RBP6.93□□□□□ -1.3
CD46-211ENST00000464082 ACSF2Q96CM8 615 aaPredicted RBP6.93□□□□□ -1.3
CD46-211ENST00000464082 BDH2Q9BUT1 245 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 DDX21Q9NR30 783 aaKnown RBP eCLIP6.93□□□□□ -1.3
CD46-211ENST00000464082 IFT57Q9NWB7 429 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 CHPF2Q9P2E5 772 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 USTQ9Y2C2 406 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 ZNF652Q9Y2D9 606 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 DUOX1Q9NRD9 1551 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 SCN9AQ15858 1988 aa6.93□□□□□ -1.3
CD46-211ENST00000464082 HOXB7P09629 217 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 ST5P78524 1137 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 CCDC27Q2M243 656 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 OLFM4Q6UX06 510 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 COPS6Q7L5N1 327 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 SP8Q8IXZ3 490 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 C8orf58Q8NAV2 365 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 ZNF526Q8TF50 670 aaPredicted RBP6.92□□□□□ -1.3
CD46-211ENST00000464082 ZNF622Q969S3 477 aaKnown RBP eCLIP6.92□□□□□ -1.3
CD46-211ENST00000464082 MASTLQ96GX5 879 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 NMRK2Q9NPI5 230 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 RNF181Q9P0P0 153 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 KCNH3Q9ULD8 1083 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 ZNF281Q9Y2X9 895 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 LAS1LQ9Y4W2 734 aaKnown RBP6.92□□□□□ -1.3
CD46-211ENST00000464082 TACC3Q9Y6A5 838 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 LTBP3Q9NS15 1303 aa6.92□□□□□ -1.3
CD46-211ENST00000464082 HRKO00198 91 aa6.91□□□□□ -1.3
CD46-211ENST00000464082 USP2O75604 605 aaPredicted RBP6.91□□□□□ -1.3
CD46-211ENST00000464082 NPR1P16066 1061 aa6.91□□□□□ -1.3
CD46-211ENST00000464082 LMNB1P20700 586 aa6.91□□□□□ -1.3
CD46-211ENST00000464082 CDR1P51861 262 aa6.91□□□□□ -1.3
CD46-211ENST00000464082 CNKSR3Q6P9H4 555 aa6.91□□□□□ -1.3
CD46-211ENST00000464082 KIF6Q6ZMV9 814 aa6.91□□□□□ -1.3
CD46-211ENST00000464082 SV2BQ7L1I2 683 aa6.91□□□□□ -1.3
CD46-211ENST00000464082 NPM2Q86SE8 214 aaKnown RBP6.91□□□□□ -1.3
CD46-211ENST00000464082 FAM129CQ86XR2 697 aa6.91□□□□□ -1.3
CD46-211ENST00000464082 SYNE4Q8N205 404 aa6.91□□□□□ -1.3
CD46-211ENST00000464082 TSPYL6Q8N831 410 aa6.91□□□□□ -1.3
CD46-211ENST00000464082 LUC7LQ9NQ29 371 aaKnown RBP6.91□□□□□ -1.3
CD46-211ENST00000464082 TRPM7Q96QT4 1865 aa6.9□□□□□ -1.3
CD46-211ENST00000464082 ZC3H12DA2A288 527 aaKnown RBP6.9□□□□□ -1.3
CD46-211ENST00000464082 UPK3BL1B0FP48 263 aa6.9□□□□□ -1.3
CD46-211ENST00000464082 UPK3BL2E5RIL1 263 aa6.9□□□□□ -1.3
CD46-211ENST00000464082 PRICKLE3O43900 615 aaPredicted RBP6.9□□□□□ -1.3
CD46-211ENST00000464082 USP17L7P0C7H9 530 aa6.9□□□□□ -1.3
CD46-211ENST00000464082 SLC10A5Q5PT55 438 aa6.9□□□□□ -1.3
CD46-211ENST00000464082 FRMD5Q7Z6J6 570 aa6.9□□□□□ -1.3
CD46-211ENST00000464082 NLRP10Q86W26 655 aa6.9□□□□□ -1.3
CD46-211ENST00000464082 TP53I13Q8NBR0 393 aaPredicted RBP6.9□□□□□ -1.3
CD46-211ENST00000464082 MZB1Q8WU39 189 aa6.9□□□□□ -1.3
CD46-211ENST00000464082 TSR2Q969E8 191 aaKnown RBP6.9□□□□□ -1.3
CD46-211ENST00000464082 ISCA1Q9BUE6 129 aa6.9□□□□□ -1.3
CD46-211ENST00000464082 MRS2Q9HD23 443 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms