RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SYN1P17600 705 aa20.18■□□□□ 0.82
VPS52-214ENST00000463486 CIITAP33076 1130 aa20.18■□□□□ 0.82
VPS52-214ENST00000463486 DGKDQ16760 1214 aa20.18■□□□□ 0.82
VPS52-214ENST00000463486 NIPA1Q7RTP0 329 aa20.18■□□□□ 0.82
VPS52-214ENST00000463486 OXER1Q8TDS5 423 aa20.18■□□□□ 0.82
VPS52-214ENST00000463486 VTI1AQ96AJ9 217 aa20.18■□□□□ 0.82
VPS52-214ENST00000463486 LENG9Q96B70 501 aa20.18■□□□□ 0.82
VPS52-214ENST00000463486 GPR20Q99678 358 aa20.18■□□□□ 0.82
VPS52-214ENST00000463486 C16orf70Q9BSU1 422 aa20.18■□□□□ 0.82
VPS52-214ENST00000463486 HAS3O00219 553 aa20.17■□□□□ 0.82
VPS52-214ENST00000463486 PQBP1O60828 265 aaKnown RBP20.17■□□□□ 0.82
VPS52-214ENST00000463486 ITGB8P26012 769 aa20.17■□□□□ 0.82
VPS52-214ENST00000463486 ITGB3BPQ13352 177 aaPredicted RBP20.17■□□□□ 0.82
VPS52-214ENST00000463486 NBPF20Q3BBV1 942 aa20.17■□□□□ 0.82
VPS52-214ENST00000463486 WASF1Q92558 559 aa20.17■□□□□ 0.82
VPS52-214ENST00000463486 SEZ6LQ9BYH1 1024 aa20.17■□□□□ 0.82
VPS52-214ENST00000463486 MLXIPQ9HAP2 919 aa20.17■□□□□ 0.82
VPS52-214ENST00000463486 AGO4Q9HCK5 861 aaKnown RBP20.17■□□□□ 0.82
VPS52-214ENST00000463486 DOCK5Q9H7D0 1870 aa20.17■□□□□ 0.82
VPS52-214ENST00000463486 KIAA0355O15063 1070 aa20.16■□□□□ 0.82
VPS52-214ENST00000463486 DHX15O43143 795 aaKnown RBP20.16■□□□□ 0.82
VPS52-214ENST00000463486 ST18O60284 1047 aa20.16■□□□□ 0.82
VPS52-214ENST00000463486 F2P00734 622 aa20.16■□□□□ 0.82
VPS52-214ENST00000463486 TBCKQ8TEA7 893 aa20.16■□□□□ 0.82
VPS52-214ENST00000463486 PPP1R13LQ8WUF5 828 aa20.16■□□□□ 0.82
VPS52-214ENST00000463486 TNFRSF25Q93038 417 aa20.16■□□□□ 0.82
VPS52-214ENST00000463486 TMX3Q96JJ7 454 aa20.16■□□□□ 0.82
VPS52-214ENST00000463486 TBX21Q9UL17 535 aa20.16■□□□□ 0.82
VPS52-214ENST00000463486 GSTTP1A0A1W2PQM5 241 aa20.15■□□□□ 0.82
VPS52-214ENST00000463486 CLTBP09497 229 aa20.15■□□□□ 0.82
VPS52-214ENST00000463486 ZNF286BP0CG31 522 aa20.15■□□□□ 0.82
VPS52-214ENST00000463486 USP11P51784 963 aa20.15■□□□□ 0.82
VPS52-214ENST00000463486 EARS2Q5JPH6 523 aaKnown RBP20.15■□□□□ 0.82
VPS52-214ENST00000463486 GIMAP8Q8ND71 665 aaPredicted RBP20.15■□□□□ 0.82
VPS52-214ENST00000463486 CTAGE1Q96RT6 745 aa20.15■□□□□ 0.82
VPS52-214ENST00000463486 GDF15Q99988 308 aa20.15■□□□□ 0.82
VPS52-214ENST00000463486 TRPV6Q9H1D0 765 aa20.15■□□□□ 0.82
VPS52-214ENST00000463486 PKD2L1Q9P0L9 805 aa20.15■□□□□ 0.82
VPS52-214ENST00000463486 NFASCO94856 1347 aa20.14■□□□□ 0.81
VPS52-214ENST00000463486 MROH7Q68CQ1 1323 aa20.14■□□□□ 0.81
VPS52-214ENST00000463486 CYP3A7-CYP3A51PA0A087WV96 503 aa20.14■□□□□ 0.81
VPS52-214ENST00000463486 DCDC2CA8MYV0 355 aa20.14■□□□□ 0.81
VPS52-214ENST00000463486 CYP3A7P24462 503 aa20.14■□□□□ 0.81
VPS52-214ENST00000463486 NFRKBQ6P4R8 1299 aa20.14■□□□□ 0.81
VPS52-214ENST00000463486 PLA2G4DQ86XP0 818 aa20.14■□□□□ 0.81
VPS52-214ENST00000463486 MBOAT7Q96N66 472 aa20.14■□□□□ 0.81
VPS52-214ENST00000463486 LAMA3Q16787 3333 aa20.14■□□□□ 0.81
VPS52-214ENST00000463486 TRIOBPQ9H2D6 2365 aa20.14■□□□□ 0.81
VPS52-214ENST00000463486 B4GALT4O60513 344 aa20.13■□□□□ 0.81
VPS52-214ENST00000463486 LGALS2P05162 132 aa20.13■□□□□ 0.81
VPS52-214ENST00000463486 XBP1P17861 261 aa20.13■□□□□ 0.81
VPS52-214ENST00000463486 ZNF76P36508 570 aa20.13■□□□□ 0.81
VPS52-214ENST00000463486 MAGEA10P43363 369 aaPredicted RBP20.13■□□□□ 0.81
VPS52-214ENST00000463486 PSEN2P49810 448 aa20.13■□□□□ 0.81
VPS52-214ENST00000463486 NR5A1Q13285 461 aa20.13■□□□□ 0.81
VPS52-214ENST00000463486 HIC1Q14526 733 aa20.13■□□□□ 0.81
VPS52-214ENST00000463486 KRT40Q6A162 431 aa20.13■□□□□ 0.81
VPS52-214ENST00000463486 SESTD1Q86VW0 696 aa20.13■□□□□ 0.81
VPS52-214ENST00000463486 LTBP2Q14767 1821 aa20.12■□□□□ 0.81
VPS52-214ENST00000463486 FAM205CA6NFA0 338 aa20.12■□□□□ 0.81
VPS52-214ENST00000463486 CCNE2O96020 404 aa20.12■□□□□ 0.81
VPS52-214ENST00000463486 MMP1P03956 469 aa20.12■□□□□ 0.81
VPS52-214ENST00000463486 PTPN11Q06124 597 aaPredicted RBP20.12■□□□□ 0.81
VPS52-214ENST00000463486 KRT25Q7Z3Z0 450 aa20.12■□□□□ 0.81
VPS52-214ENST00000463486 TRMT13Q9NUP7 481 aaKnown RBP20.12■□□□□ 0.81
VPS52-214ENST00000463486 TMEM39AQ9NV64 488 aa20.12■□□□□ 0.81
VPS52-214ENST00000463486 COLQQ9Y215 455 aaPredicted RBP20.12■□□□□ 0.81
VPS52-214ENST00000463486 ATG7O95352 703 aa20.11■□□□□ 0.81
VPS52-214ENST00000463486 MCM2P49736 904 aa20.11■□□□□ 0.81
VPS52-214ENST00000463486 SP4Q02446 784 aa20.11■□□□□ 0.81
VPS52-214ENST00000463486 MFSD10Q14728 455 aa20.11■□□□□ 0.81
VPS52-214ENST00000463486 NONOQ15233 471 aaKnown RBP eCLIP20.11■□□□□ 0.81
VPS52-214ENST00000463486 INF2Q27J81 1249 aa20.11■□□□□ 0.81
VPS52-214ENST00000463486 KIAA0753Q2KHM9 967 aa20.11■□□□□ 0.81
VPS52-214ENST00000463486 Q4G0T1 1027 aa20.11■□□□□ 0.81
VPS52-214ENST00000463486 PRR16Q569H4 304 aa20.11■□□□□ 0.81
VPS52-214ENST00000463486 TRIM50Q86XT4 487 aa20.11■□□□□ 0.81
VPS52-214ENST00000463486 SEPT1Q8WYJ6 367 aa20.11■□□□□ 0.81
VPS52-214ENST00000463486 PCYT2Q99447 389 aa20.11■□□□□ 0.81
VPS52-214ENST00000463486 JPH1Q9HDC5 661 aaPredicted RBP20.11■□□□□ 0.81
VPS52-214ENST00000463486 PRDM5Q9NQX1 630 aaPredicted RBP20.11■□□□□ 0.81
VPS52-214ENST00000463486 BTBD18B2RXH4 712 aa20.1■□□□□ 0.81
VPS52-214ENST00000463486 H3BRB1 525 aa20.1■□□□□ 0.81
VPS52-214ENST00000463486 IPO5O00410 1097 aaKnown RBP20.1■□□□□ 0.81
VPS52-214ENST00000463486 NOP56O00567 594 aaKnown RBP20.1■□□□□ 0.81
VPS52-214ENST00000463486 MSH4O15457 936 aa20.1■□□□□ 0.81
VPS52-214ENST00000463486 TDP2O95551 362 aa20.1■□□□□ 0.81
VPS52-214ENST00000463486 HOXC8P31273 242 aa20.1■□□□□ 0.81
VPS52-214ENST00000463486 BMP8BP34820 402 aa20.1■□□□□ 0.81
VPS52-214ENST00000463486 TCF7P36402 384 aaPredicted RBP20.1■□□□□ 0.81
VPS52-214ENST00000463486 HMGN5P82970 282 aaKnown RBP20.1■□□□□ 0.81
VPS52-214ENST00000463486 CHRDL2Q6WN34 429 aa20.1■□□□□ 0.81
VPS52-214ENST00000463486 UIMC1Q96RL1 719 aa20.1■□□□□ 0.81
VPS52-214ENST00000463486 TUT1Q9H6E5 874 aaKnown RBP20.1■□□□□ 0.81
VPS52-214ENST00000463486 HDAC6Q9UBN7 1215 aa20.1■□□□□ 0.81
VPS52-214ENST00000463486 SLC9A2Q9UBY0 812 aa20.1■□□□□ 0.81
VPS52-214ENST00000463486 LGR5O75473 907 aa20.09■□□□□ 0.81
VPS52-214ENST00000463486 KRT2P35908 639 aa20.09■□□□□ 0.81
VPS52-214ENST00000463486 FOSBP53539 338 aa20.09■□□□□ 0.81
VPS52-214ENST00000463486 ACTR2P61160 394 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms