RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 CLIC6Q96NY7 704 aa4.16□□□□□ -1.74
NDUFA4-202ENST00000463308 GNRHR2Q96P88 292 aa4.16□□□□□ -1.74
NDUFA4-202ENST00000463308 APBA2Q99767 749 aa4.16□□□□□ -1.74
NDUFA4-202ENST00000463308 BTG4Q9NY30 223 aa4.16□□□□□ -1.74
NDUFA4-202ENST00000463308 FOXN1O15353 648 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 VAMP4O75379 141 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 CNOT4O95628 575 aaKnown RBP4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 SLC6A11P48066 632 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 MFAP1P55081 439 aaKnown RBP4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 FANCCQ00597 558 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 ADAM9Q13443 819 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 NCAPHQ15003 741 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 ZNF394Q53GI3 561 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 VHLLQ6RSH7 139 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 RUFY4Q6ZNE9 571 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 ARHGEF39Q8N4T4 335 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 LMF1Q96S06 567 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 MMP19Q99542 508 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 SLC2A4RGQ9NR83 387 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 STRIP2Q9ULQ0 834 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 PCDHGB7Q9Y5F8 929 aa4.15□□□□□ -1.75
NDUFA4-202ENST00000463308 C7orf72A4D263 438 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 TMEM191CA6NGB0 347 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 C22orf46C9J442 243 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 SCAMP3O14828 347 aaKnown RBP4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 KCNH1O95259 989 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 THBDP07204 575 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 KCNAB2Q13303 367 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 E4F1Q66K89 784 aaPredicted RBP4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 MILR1Q7Z6M3 343 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 PRIMA1Q86XR5 153 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 IL17DQ8TAD2 202 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 GPRASP2Q96D09 838 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 TRMT2BQ96GJ1 504 aaKnown RBP4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 MTA3Q9BTC8 594 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 TTPALQ9BTX7 342 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 CLEC1BQ9P126 229 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 LRP2BPQ9P2M1 347 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 FBLN5Q9UBX5 448 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 ADAM29Q9UKF5 820 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 EFR3BQ9Y2G0 817 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 ZDHHC9Q9Y397 364 aa4.14□□□□□ -1.75
NDUFA4-202ENST00000463308 PLS3P13797 630 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 ACO1P21399 889 aaKnown RBP4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 ACRV1P26436 265 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 RACK1P63244 317 aaKnown RBP4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 SCRN1Q12765 414 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 PAK2Q13177 524 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 ZNF568Q3ZCX4 644 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 KIAA1211LQ6NV74 962 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 MICALCLQ6ZW33 695 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 RIOX2Q8IUF8 465 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 FAM126BQ8IXS8 530 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 BVESQ8NE79 360 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 FAM89AQ96GI7 184 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 TMEM169Q96HH4 297 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 DDX41Q9UJV9 622 aaKnown RBP4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 NUB1Q9Y5A7 615 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 TIMM13Q9Y5L4 95 aaPredicted RBP4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 SLC4A7Q9Y6M7 1214 aa4.13□□□□□ -1.75
NDUFA4-202ENST00000463308 A0A1W2PQH9 124 aa4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 MEFVO15553 781 aaPredicted RBP4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 KRT4P19013 534 aa4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 DNAJA1P31689 397 aaKnown RBP4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 SOX9P48436 509 aa4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 GIPRP48546 466 aa4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 MLLT6P55198 1093 aaPredicted RBP4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 RALYLQ86SE5 291 aaKnown RBP4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 TEX2Q8IWB9 1127 aa4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 CHAMP1Q96JM3 812 aa4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 TMEM209Q96SK2 561 aa4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 ZNF703Q9H7S9 590 aaPredicted RBP4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 GINM1Q9NU53 330 aa4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 AURKAIP1Q9NWT8 199 aaPredicted RBP4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 PCDHB10Q9UN67 800 aa4.12□□□□□ -1.75
NDUFA4-202ENST00000463308 AGRPO00253 132 aa4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 KRIT1O00522 736 aa4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 COLEC12Q5KU26 742 aa4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 IFNL2Q8IZJ0 200 aa4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 ZCCHC14Q8WYQ9 949 aaKnown RBP4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 DIO2Q92813 273 aa4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 TOE1Q96GM8 510 aaKnown RBP4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 CCDC140Q96MF4 163 aa4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 MCMBPQ9BTE3 642 aa4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 KRTAP1-5Q9BYS1 174 aa4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 CYP26B1Q9NR63 512 aa4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 TMEFF2Q9UIK5 374 aaPredicted RBP4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 EMC9Q9Y3B6 208 aa4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 SIT1Q9Y3P8 196 aa4.11□□□□□ -1.75
NDUFA4-202ENST00000463308 HGSO14964 777 aaPredicted RBP4.1□□□□□ -1.75
NDUFA4-202ENST00000463308 DGKIO75912 1065 aa4.1□□□□□ -1.75
NDUFA4-202ENST00000463308 NUDT3O95989 172 aa4.1□□□□□ -1.75
NDUFA4-202ENST00000463308 CPP00450 1065 aa4.1□□□□□ -1.75
NDUFA4-202ENST00000463308 Q6ZPA2 131 aa4.1□□□□□ -1.75
NDUFA4-202ENST00000463308 Q6ZSN1 163 aa4.1□□□□□ -1.75
NDUFA4-202ENST00000463308 CEP68Q76N32 757 aa4.1□□□□□ -1.75
NDUFA4-202ENST00000463308 POLNQ7Z5Q5 900 aa4.1□□□□□ -1.75
NDUFA4-202ENST00000463308 TAX1BP1Q86VP1 789 aa4.1□□□□□ -1.75
NDUFA4-202ENST00000463308 TRIM48Q8IWZ4 208 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms