RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 H3BRB1 525 aa14.98□□□□□ -0.01
HDAC1-203ENST00000463172 STXBP3O00186 592 aa14.98□□□□□ -0.01
HDAC1-203ENST00000463172 CPLX1O14810 134 aa14.98□□□□□ -0.01
HDAC1-203ENST00000463172 PRPF3O43395 683 aaKnown RBP14.98□□□□□ -0.01
HDAC1-203ENST00000463172 ACRP10323 421 aa14.98□□□□□ -0.01
HDAC1-203ENST00000463172 GDF6Q6KF10 455 aaPredicted RBP14.98□□□□□ -0.01
HDAC1-203ENST00000463172 BICD2Q8TD16 824 aa14.98□□□□□ -0.01
HDAC1-203ENST00000463172 RNF26Q9BY78 433 aaPredicted RBP14.98□□□□□ -0.01
HDAC1-203ENST00000463172 WNT8AQ9H1J5 351 aa14.98□□□□□ -0.01
HDAC1-203ENST00000463172 TUT1Q9H6E5 874 aaKnown RBP14.98□□□□□ -0.01
HDAC1-203ENST00000463172 HDAC6Q9UBN7 1215 aa14.98□□□□□ -0.01
HDAC1-203ENST00000463172 UMODL1Q5DID0 1318 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 C17orf102A2RUQ5 167 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 HAS3O00219 553 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 LGALS2P05162 132 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 ZNF76P36508 570 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 EVCP57679 992 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 PTK7Q13308 1070 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 RAB30Q15771 203 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 Q7L0L9 218 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 TNPO1Q92973 898 aaKnown RBP14.97□□□□□ -0.01
HDAC1-203ENST00000463172 SCLYQ96I15 445 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 GPR20Q99678 358 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 SDF4Q9BRK5 362 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 ANO3Q9BYT9 981 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 FTOQ9C0B1 505 aaKnown RBP eCLIP14.97□□□□□ -0.01
HDAC1-203ENST00000463172 JADE2Q9NQC1 790 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 FAM217BQ9NTX9 383 aaPredicted RBP14.97□□□□□ -0.01
HDAC1-203ENST00000463172 MTMR10Q9NXD2 777 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 MSRAQ9UJ68 235 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 UBIAD1Q9Y5Z9 338 aa14.97□□□□□ -0.01
HDAC1-203ENST00000463172 ESYT2A0FGR8 921 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 ZBBXA8MT70 800 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 IQCF3P0C7M6 154 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 SELPP16109 830 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 IFNAR1P17181 557 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 PDIA3P30101 505 aaKnown RBP14.96□□□□□ -0.01
HDAC1-203ENST00000463172 ANAPC15P60006 121 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 SP4Q02446 784 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 SEMA3FQ13275 785 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 C16orf59Q7L2K0 433 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 OTOP2Q7RTS6 562 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 DEFB128Q7Z7B8 93 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 ZNF274Q96GC6 653 aaPredicted RBP14.96□□□□□ -0.01
HDAC1-203ENST00000463172 MXRA8Q9BRK3 442 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 C16orf70Q9BSU1 422 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 SLC26A6Q9BXS9 759 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 PDRG1Q9NUG6 133 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 STXBP5LQ9Y2K9 1186 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 SLC4A7Q9Y6M7 1214 aa14.96□□□□□ -0.01
HDAC1-203ENST00000463172 CDKL5O76039 1030 aa14.95□□□□□ -0.02
HDAC1-203ENST00000463172 ITGB5P18084 799 aa14.95□□□□□ -0.02
HDAC1-203ENST00000463172 DNAJB2P25686 324 aa14.95□□□□□ -0.02
HDAC1-203ENST00000463172 ANKRD1Q15327 319 aa14.95□□□□□ -0.02
HDAC1-203ENST00000463172 UTP14CQ5TAP6 766 aaKnown RBP14.95□□□□□ -0.02
HDAC1-203ENST00000463172 RASIP1Q5U651 963 aa14.95□□□□□ -0.02
HDAC1-203ENST00000463172 LRRC8DQ7L1W4 858 aa14.95□□□□□ -0.02
HDAC1-203ENST00000463172 REXO1Q8N1G1 1221 aaKnown RBP14.95□□□□□ -0.02
HDAC1-203ENST00000463172 PPP1R13LQ8WUF5 828 aa14.95□□□□□ -0.02
HDAC1-203ENST00000463172 SEPT1Q8WYJ6 367 aa14.95□□□□□ -0.02
HDAC1-203ENST00000463172 ZMYND12Q9H0C1 365 aa14.95□□□□□ -0.02
HDAC1-203ENST00000463172 TCEAL9Q9UHQ7 104 aa14.95□□□□□ -0.02
HDAC1-203ENST00000463172 SCN5AQ14524 2016 aa14.95□□□□□ -0.02
HDAC1-203ENST00000463172 BAIAP3O94812 1187 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 KCNA2P16389 499 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 TCF7P36402 384 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-203ENST00000463172 SREBF1P36956 1147 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 CCT2P78371 535 aaKnown RBP14.94□□□□□ -0.02
HDAC1-203ENST00000463172 SSRP1Q08945 709 aaKnown RBP14.94□□□□□ -0.02
HDAC1-203ENST00000463172 RBL2Q08999 1139 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 CEP55Q53EZ4 464 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 TYW1BQ6NUM6 668 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 NIPA1Q7RTP0 329 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 FAM177A1Q8N128 213 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-203ENST00000463172 ATP6V0A1Q93050 837 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 PHKBQ93100 1093 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 TIFAQ96CG3 184 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 FAM161BQ96MY7 647 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 SEMA6BQ9H3T3 888 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 AZI2Q9H6S1 392 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 JPH1Q9HDC5 661 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-203ENST00000463172 SH3GLB2Q9NR46 395 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 ERAP1Q9NZ08 941 aa14.94□□□□□ -0.02
HDAC1-203ENST00000463172 EMSYQ7Z589 1322 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 CAND2O75155 1236 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 SMIM10L2AP0DMW4 78 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 SMIM10L2BP0DMW5 78 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 CKBP12277 381 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 KCNJ6P48051 423 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 CLK2P49760 499 aaKnown RBP14.93□□□□□ -0.02
HDAC1-203ENST00000463172 ARHGAP4P98171 946 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 SETQ01105 290 aaPredicted RBP14.93□□□□□ -0.02
HDAC1-203ENST00000463172 TOB2Q14106 344 aaPredicted RBP14.93□□□□□ -0.02
HDAC1-203ENST00000463172 JAKMIP3Q5VZ66 844 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 GLG1Q92896 1179 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 SLC9A7Q96T83 725 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 C22orf23Q9BZE7 217 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 UPF3BQ9BZI7 483 aaKnown RBP14.93□□□□□ -0.02
HDAC1-203ENST00000463172 SMARCAD1Q9H4L7 1026 aa14.93□□□□□ -0.02
HDAC1-203ENST00000463172 KCNH7Q9NS40 1196 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms