RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 PNMA2Q9UL42 364 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 PRR12Q9ULL5 1215 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 ISY1Q9ULR0 285 aaKnown RBP9.4□□□□□ -0.9
GARNL3-212ENST00000463005 PTPRSQ13332 1948 aa9.4□□□□□ -0.9
GARNL3-212ENST00000463005 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-212ENST00000463005 EPOPA6NHQ4 379 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 B4DLN1 442 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 GPAA1O43292 621 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 LPXNO60711 386 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 ICAM1P05362 532 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 ALADP13716 330 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 ALDH5A1P51649 535 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-212ENST00000463005 MRPL12P52815 198 aaKnown RBP9.39□□□□□ -0.91
GARNL3-212ENST00000463005 PTK2Q05397 1052 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 MUM1L1Q5H9M0 696 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 FAM47CQ5HY64 1035 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 TMEM63BQ5T3F8 832 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 KRT40Q6A162 431 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 NSMFQ6X4W1 530 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 SPNS2Q8IVW8 549 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 CCDC155Q8N6L0 562 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 OR6J1Q8NGC5 347 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 CAGE1Q8TC20 777 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 PBXIP1Q96AQ6 731 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 LRRCC1Q9C099 1032 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 C11orf16Q9NQ32 467 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 CCPG1Q9ULG6 757 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 TRANK1O15050 2925 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 BRWD1Q9NSI6 2320 aa9.39□□□□□ -0.91
GARNL3-212ENST00000463005 SIP14410 1827 aa9.38□□□□□ -0.91
GARNL3-212ENST00000463005 EFCAB14O75071 495 aa9.38□□□□□ -0.91
GARNL3-212ENST00000463005 PTGS1P23219 599 aa9.38□□□□□ -0.91
GARNL3-212ENST00000463005 BAATQ14032 418 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-212ENST00000463005 TSGA10IPQ3SY00 556 aa9.38□□□□□ -0.91
GARNL3-212ENST00000463005 KCTD1Q719H9 257 aa9.38□□□□□ -0.91
GARNL3-212ENST00000463005 CENPQQ7L2Z9 268 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-212ENST00000463005 AFAP1L1Q8TED9 768 aa9.38□□□□□ -0.91
GARNL3-212ENST00000463005 SCFD2Q8WU76 684 aa9.38□□□□□ -0.91
GARNL3-212ENST00000463005 KCNH6Q9H252 994 aa9.38□□□□□ -0.91
GARNL3-212ENST00000463005 EPB41L4AQ9HCS5 686 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-212ENST00000463005 STX8Q9UNK0 236 aa9.38□□□□□ -0.91
GARNL3-212ENST00000463005 NOD1Q9Y239 953 aa9.38□□□□□ -0.91
GARNL3-212ENST00000463005 REV3LO60673 3130 aa9.38□□□□□ -0.91
GARNL3-212ENST00000463005 MYH7BA7E2Y1 1941 aa9.38□□□□□ -0.91
GARNL3-212ENST00000463005 ABHD14A-ACY1A0A1B0GW23 586 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 ATP9BO43861 1147 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 SKIP12755 728 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 ERVK-21P61565 698 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 PPARAQ07869 468 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 HDAC1Q13547 482 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-212ENST00000463005 PPP2R5BQ15173 497 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 LEXMQ3ZCV2 418 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 BTNL9Q6UXG8 535 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 ALYREFQ86V81 257 aaKnown RBP9.37□□□□□ -0.91
GARNL3-212ENST00000463005 SESTD1Q86VW0 696 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 FAM178BQ8IXR5 827 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 GJD3Q8N144 294 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 ARMC2Q8NEN0 867 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 DNERQ8NFT8 737 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 DCAF4Q8WV16 495 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 GPATCH3Q96I76 525 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 PURBQ96QR8 312 aaKnown RBP9.37□□□□□ -0.91
GARNL3-212ENST00000463005 TGS1Q96RS0 853 aaKnown RBP9.37□□□□□ -0.91
GARNL3-212ENST00000463005 RAD9AQ99638 391 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 MAF1Q9H063 256 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 NAPBQ9H115 298 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 RANBP17Q9H2T7 1088 aaKnown RBP9.37□□□□□ -0.91
GARNL3-212ENST00000463005 SUGCTQ9HAC7 445 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 CTNNA3Q9UI47 895 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 DDX49Q9Y6V7 483 aaKnown RBP9.37□□□□□ -0.91
GARNL3-212ENST00000463005 KIAA1217Q5T5P2 1943 aa9.37□□□□□ -0.91
GARNL3-212ENST00000463005 MUC6Q6W4X9 2439 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 COL4A4P53420 1690 aaPredicted RBP9.36□□□□□ -0.91
GARNL3-212ENST00000463005 PTPDC1A2A3K4 754 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 TSPY2A6NKD2 308 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 RNF223E7ERA6 249 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 ARHGEF15O94989 841 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 SELPP16109 830 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 NOVP48745 357 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 SNAP25P60880 206 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 WDR5P61964 334 aaKnown RBP9.36□□□□□ -0.91
GARNL3-212ENST00000463005 AGERQ15109 404 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 PTGISQ16647 500 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 CNKSR3Q6P9H4 555 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 RNF207Q6ZRF8 634 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 ZBTB33Q86T24 672 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 UBE2ZQ9H832 354 aaPredicted RBP9.36□□□□□ -0.91
GARNL3-212ENST00000463005 CD320Q9NPF0 282 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 IL17RBQ9NRM6 502 aa9.36□□□□□ -0.91
GARNL3-212ENST00000463005 FAM86C2PA6NEL3 165 aa9.35□□□□□ -0.91
GARNL3-212ENST00000463005 M0R2C6 588 aa9.35□□□□□ -0.91
GARNL3-212ENST00000463005 GJB5O95377 273 aa9.35□□□□□ -0.91
GARNL3-212ENST00000463005 CXCL10P02778 98 aa9.35□□□□□ -0.91
GARNL3-212ENST00000463005 TXNP10599 105 aaKnown RBP9.35□□□□□ -0.91
GARNL3-212ENST00000463005 CASTP20810 708 aaKnown RBP9.35□□□□□ -0.91
GARNL3-212ENST00000463005 EDNRBP24530 442 aa9.35□□□□□ -0.91
GARNL3-212ENST00000463005 KCNC4Q03721 635 aa9.35□□□□□ -0.91
GARNL3-212ENST00000463005 RBL2Q08999 1139 aa9.35□□□□□ -0.91
GARNL3-212ENST00000463005 IKBKEQ14164 716 aa9.35□□□□□ -0.91
GARNL3-212ENST00000463005 LRRC8DQ7L1W4 858 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms