RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 MMGT1Q8N4V1 131 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 ETNK1Q9HBU6 452 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 SNX24Q9Y343 169 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 MYO5CQ9NQX4 1742 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 FAM187AA6NFU0 413 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 CASP1P29466 404 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 RFC4P35249 363 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 EIF6P56537 245 aaKnown RBP17.12■□□□□ 0.33
SMC4-204ENST00000462787 ESRRGP62508 458 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.333e-7■□□□□ 10
SMC4-204ENST00000462787 FAM178BQ8IXR5 827 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 KCNV2Q8TDN2 545 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 PNKPQ96T60 521 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 FBXL5Q9UKA1 691 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 KIAA1024Q9UPX6 916 aa17.12■□□□□ 0.33
SMC4-204ENST00000462787 H0Y3Z8 333 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 ATF7P17544 494 aaPredicted RBP17.11■□□□□ 0.33
SMC4-204ENST00000462787 SLC1A4P43007 532 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 HDLBPQ00341 1268 aaKnown RBP17.11■□□□□ 0.33
SMC4-204ENST00000462787 BYSLQ13895 437 aaKnown RBP17.11■□□□□ 0.33
SMC4-204ENST00000462787 AGBL2Q5U5Z8 902 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 SUGP1Q8IWZ8 645 aaKnown RBP17.11■□□□□ 0.33
SMC4-204ENST00000462787 RASGRP4Q8TDF6 673 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 PSTPIP2Q9H939 334 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 SYNGAP1Q96PV0 1343 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 CA4P22748 312 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 RAD23BP54727 409 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 RSRC2Q7L4I2 434 aaKnown RBP17.11■□□□□ 0.33
SMC4-204ENST00000462787 TPH2Q8IWU9 490 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 TACC3Q9Y6A5 838 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 ERVV-2B6SEH9 535 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 GFPT2O94808 682 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 CCND1P24385 295 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 HADHQ16836 314 aaKnown RBP17.11■□□□□ 0.33
SMC4-204ENST00000462787 SYT2Q8N9I0 419 aaPredicted RBP17.11■□□□□ 0.33
SMC4-204ENST00000462787 SGSM3Q96HU1 749 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 SEC16BQ96JE7 1060 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 SSX2IPQ9Y2D8 614 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 ADCY10Q96PN6 1610 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 GFPT1Q06210 699 aaPredicted RBP17.11■□□□□ 0.33
SMC4-204ENST00000462787 CCDC93Q567U6 631 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 GJA10Q969M2 543 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 CYFIP2Q96F07 1278 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 FGD4Q96M96 766 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 OLFM3Q96PB7 478 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 LRRC37BQ96QE4 947 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 SUGCTQ9HAC7 445 aa17.11■□□□□ 0.33
SMC4-204ENST00000462787 GYG2O15488 501 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 SNX16P57768 344 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 TMED1Q13445 227 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 PTGISQ16647 500 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 CASC4Q6P4E1 433 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 FAM186BQ8IYM0 893 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 DONSONQ9NYP3 566 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.1■□□□□ 0.33
SMC4-204ENST00000462787 H3BQF6 201 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 GAP43P17677 238 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 MFAP3P55082 362 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 UNC13DQ70J99 1090 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 GABPB2Q8TAK5 448 aaPredicted RBP17.1■□□□□ 0.33
SMC4-204ENST00000462787 GCNT4Q9P109 453 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 ABCA8O94911 1581 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 ACSL3O95573 720 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 FXR1P51114 621 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMC4-204ENST00000462787 PPM1KQ8N3J5 372 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 ZNF653Q96CK0 615 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 SH3GLB2Q9NR46 395 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 hCG_1984214I3L0E3 225 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 NSFP46459 744 aaKnown RBP17.1■□□□□ 0.33
SMC4-204ENST00000462787 ZNF713Q8N859 430 aaPredicted RBP17.1■□□□□ 0.33
SMC4-204ENST00000462787 HOOK2Q96ED9 719 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 CHP1Q99653 195 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 EMILIN3Q9NT22 766 aa17.1■□□□□ 0.33
SMC4-204ENST00000462787 FBXO2Q9UK22 296 aaPredicted RBP17.1■□□□□ 0.33
SMC4-204ENST00000462787 DIAPH2O60879 1101 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 SPAG7O75391 227 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 BCAMP50895 628 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 AOC3Q16853 763 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 MAPKAPK5Q8IW41 473 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 TGFBRAP1Q8WUH2 860 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 MPHOSPH6Q99547 160 aaKnown RBP17.09■□□□□ 0.33
SMC4-204ENST00000462787 KCNG1Q9UIX4 513 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 ZNF185O15231 689 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 MT-ND3P03897 115 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 BPIFB4P59827 614 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 CAV1Q03135 178 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 SNX1Q13596 522 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 MAEAQ7L5Y9 396 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 C1orf112Q9NSG2 853 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 MADDQ8WXG6 1647 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 FAM170AA1A519 330 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 PABPN1LA6NDY0 278 aaKnown RBP17.09■□□□□ 0.33
SMC4-204ENST00000462787 MAPK4P31152 587 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 DNAJC10Q8IXB1 793 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 TRIM55Q9BYV6 548 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 GEN1Q17RS7 908 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 KSR1Q8IVT5 923 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 UIMC1Q96RL1 719 aa17.09■□□□□ 0.33
SMC4-204ENST00000462787 NUDCD1Q96RS6 583 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms