RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 CEP55Q53EZ4 464 aa21.51■■□□□ 1.03
COL9A3-203ENST00000462700 SESTD1Q86VW0 696 aa21.51■■□□□ 1.03
COL9A3-203ENST00000462700 CYP2W1Q8TAV3 490 aa21.51■■□□□ 1.03
COL9A3-203ENST00000462700 RASGRP4Q8TDF6 673 aa21.51■■□□□ 1.03
COL9A3-203ENST00000462700 GPR20Q99678 358 aa21.51■■□□□ 1.03
COL9A3-203ENST00000462700 C22orf23Q9BZE7 217 aa21.51■■□□□ 1.03
COL9A3-203ENST00000462700 STK36Q9NRP7 1315 aa21.51■■□□□ 1.03
COL9A3-203ENST00000462700 CTDNEP1O95476 244 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 FXR1P51114 621 aaKnown RBP eCLIP21.5■■□□□ 1.03
COL9A3-203ENST00000462700 FPGSQ05932 587 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 MFSD5Q6N075 450 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 NECAB1Q8N987 351 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 CRYGNQ8WXF5 182 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 GTF3C6Q969F1 213 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 AIFM3Q96NN9 605 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 KIF2CQ99661 725 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 C16orf70Q9BSU1 422 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 HIPK3Q9H422 1215 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 KCNH7Q9NS40 1196 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 PKD2L1Q9P0L9 805 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 TELO2Q9Y4R8 837 aa21.5■■□□□ 1.03
COL9A3-203ENST00000462700 LGALS2P05162 132 aa21.49■■□□□ 1.03
COL9A3-203ENST00000462700 CYP3A4P08684 503 aa21.49■■□□□ 1.03
COL9A3-203ENST00000462700 RBM25P49756 843 aaKnown RBP21.49■■□□□ 1.03
COL9A3-203ENST00000462700 SP4Q02446 784 aa21.49■■□□□ 1.03
COL9A3-203ENST00000462700 KIAA0753Q2KHM9 967 aa21.49■■□□□ 1.03
COL9A3-203ENST00000462700 FAM177A1Q8N128 213 aaPredicted RBP21.49■■□□□ 1.03
COL9A3-203ENST00000462700 ALG1Q9BT22 464 aa21.49■■□□□ 1.03
COL9A3-203ENST00000462700 NOC4LQ9BVI4 516 aaKnown RBP21.49■■□□□ 1.03
COL9A3-203ENST00000462700 UMODL1Q5DID0 1318 aa21.49■■□□□ 1.03
COL9A3-203ENST00000462700 MEIS1O00470 390 aa21.48■■□□□ 1.03
COL9A3-203ENST00000462700 ARP10275 920 aa21.48■■□□□ 1.03
COL9A3-203ENST00000462700 CYP2C9P11712 490 aa21.48■■□□□ 1.03
COL9A3-203ENST00000462700 CYP2C18P33260 490 aa21.48■■□□□ 1.03
COL9A3-203ENST00000462700 ZNF76P36508 570 aa21.48■■□□□ 1.03
COL9A3-203ENST00000462700 EPHB4P54760 987 aa21.48■■□□□ 1.03
COL9A3-203ENST00000462700 GDF6Q6KF10 455 aaPredicted RBP21.48■■□□□ 1.03
COL9A3-203ENST00000462700 NIPA1Q7RTP0 329 aa21.48■■□□□ 1.03
COL9A3-203ENST00000462700 C7orf31Q8N865 590 aa21.48■■□□□ 1.03
COL9A3-203ENST00000462700 GTF2IRD1Q9UHL9 959 aa21.48■■□□□ 1.03
COL9A3-203ENST00000462700 PCDHA4Q9UN74 947 aa21.48■■□□□ 1.03
COL9A3-203ENST00000462700 FAM86B1E9PN63 330 aa21.47■■□□□ 1.03
COL9A3-203ENST00000462700 DTNBO60941 627 aa21.47■■□□□ 1.03
COL9A3-203ENST00000462700 FAM86B2P0C5J1 330 aa21.47■■□□□ 1.03
COL9A3-203ENST00000462700 TMEM199Q8N511 208 aa21.47■■□□□ 1.03
COL9A3-203ENST00000462700 DAGLBQ8NCG7 672 aa21.47■■□□□ 1.03
COL9A3-203ENST00000462700 AGO4Q9HCK5 861 aaKnown RBP21.47■■□□□ 1.03
COL9A3-203ENST00000462700 HDAC6Q9UBN7 1215 aa21.47■■□□□ 1.03
COL9A3-203ENST00000462700 MYH7BA7E2Y1 1941 aa21.47■■□□□ 1.03
COL9A3-203ENST00000462700 H3BRB1 525 aa21.46■■□□□ 1.03
COL9A3-203ENST00000462700 SHHQ15465 462 aa21.46■■□□□ 1.03
COL9A3-203ENST00000462700 NPY5RQ15761 445 aa21.46■■□□□ 1.03
COL9A3-203ENST00000462700 PTGISQ16647 500 aa21.46■■□□□ 1.03
COL9A3-203ENST00000462700 LRIT3Q3SXY7 679 aa21.46■■□□□ 1.03
COL9A3-203ENST00000462700 C9orf50Q5SZB4 431 aa21.46■■□□□ 1.03
COL9A3-203ENST00000462700 GALNT17Q6IS24 598 aa21.46■■□□□ 1.03
COL9A3-203ENST00000462700 BLIDQ8IZY5 108 aa21.46■■□□□ 1.03
COL9A3-203ENST00000462700 WNT8AQ9H1J5 351 aa21.46■■□□□ 1.03
COL9A3-203ENST00000462700 TUT1Q9H6E5 874 aaKnown RBP21.46■■□□□ 1.03
COL9A3-203ENST00000462700 ORC3Q9UBD5 711 aaPredicted RBP21.46■■□□□ 1.03
COL9A3-203ENST00000462700 NOD1Q9Y239 953 aa21.46■■□□□ 1.03
COL9A3-203ENST00000462700 NFASCO94856 1347 aa21.46■■□□□ 1.03
COL9A3-203ENST00000462700 IGLV3-22A0A075B6J6 115 aa21.45■■□□□ 1.02
COL9A3-203ENST00000462700 M0R2N6 131 aa21.45■■□□□ 1.02
COL9A3-203ENST00000462700 CSF2RAP15509 400 aa21.45■■□□□ 1.02
COL9A3-203ENST00000462700 TCF7P36402 384 aaPredicted RBP21.45■■□□□ 1.02
COL9A3-203ENST00000462700 CCL23P55773 120 aa21.45■■□□□ 1.02
COL9A3-203ENST00000462700 ITGB3BPQ13352 177 aaPredicted RBP21.45■■□□□ 1.02
COL9A3-203ENST00000462700 PPIGQ13427 754 aaKnown RBP eCLIP21.45■■□□□ 1.025e-25■■□□□ 14.3
COL9A3-203ENST00000462700 UTP14CQ5TAP6 766 aaKnown RBP21.45■■□□□ 1.02
COL9A3-203ENST00000462700 PLA2G4DQ86XP0 818 aa21.45■■□□□ 1.02
COL9A3-203ENST00000462700 TRIM50Q86XT4 487 aa21.45■■□□□ 1.02
COL9A3-203ENST00000462700 NSUN7Q8NE18 718 aaKnown RBP21.45■■□□□ 1.02
COL9A3-203ENST00000462700 SEPT1Q8WYJ6 367 aa21.45■■□□□ 1.02
COL9A3-203ENST00000462700 CTAGE1Q96RT6 745 aa21.45■■□□□ 1.02
COL9A3-203ENST00000462700 SDF4Q9BRK5 362 aa21.45■■□□□ 1.02
COL9A3-203ENST00000462700 JPH1Q9HDC5 661 aaPredicted RBP21.45■■□□□ 1.02
COL9A3-203ENST00000462700 KCNJ14Q9UNX9 436 aa21.45■■□□□ 1.02
COL9A3-203ENST00000462700 LIMCH1Q9UPQ0 1083 aa21.45■■□□□ 1.02
COL9A3-203ENST00000462700 DOCK5Q9H7D0 1870 aa21.44■■□□□ 1.02
COL9A3-203ENST00000462700 GSTTP1A0A1W2PQM5 241 aa21.44■■□□□ 1.02
COL9A3-203ENST00000462700 SOX1O00570 391 aaPredicted RBP21.44■■□□□ 1.02
COL9A3-203ENST00000462700 FDPSP14324 419 aaKnown RBP21.44■■□□□ 1.02
COL9A3-203ENST00000462700 XBP1P17861 261 aa21.44■■□□□ 1.02
COL9A3-203ENST00000462700 CIITAP33076 1130 aa21.44■■□□□ 1.02
COL9A3-203ENST00000462700 ST3GAL1Q11201 340 aa21.44■■□□□ 1.02
COL9A3-203ENST00000462700 WASF1Q92558 559 aa21.44■■□□□ 1.02
COL9A3-203ENST00000462700 PHF20Q9BVI0 1012 aa21.44■■□□□ 1.02
COL9A3-203ENST00000462700 UPF2Q9HAU5 1272 aaKnown RBP21.44■■□□□ 1.02
COL9A3-203ENST00000462700 SLC9A2Q9UBY0 812 aa21.44■■□□□ 1.02
COL9A3-203ENST00000462700 ZNF215Q9UL58 517 aaPredicted RBP21.44■■□□□ 1.02
COL9A3-203ENST00000462700 SETQ01105 290 aaPredicted RBP21.43■■□□□ 1.02
COL9A3-203ENST00000462700 GJB4Q9NTQ9 266 aa21.43■■□□□ 1.02
COL9A3-203ENST00000462700 TRIOBPQ9H2D6 2365 aa21.43■■□□□ 1.02
COL9A3-203ENST00000462700 LAMA3Q16787 3333 aa21.42■■□□□ 1.02
COL9A3-203ENST00000462700 PITPNM1O00562 1244 aa21.42■■□□□ 1.02
COL9A3-203ENST00000462700 EDIL3O43854 480 aa21.42■■□□□ 1.02
COL9A3-203ENST00000462700 SMIM10L2AP0DMW4 78 aa21.42■■□□□ 1.02
COL9A3-203ENST00000462700 SMIM10L2BP0DMW5 78 aa21.42■■□□□ 1.02
COL9A3-203ENST00000462700 HOXC8P31273 242 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms