RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 KCNMB3Q9NPA1 279 aa7.59□□□□□ -1.19
MSH2-204ENST00000461394 SAMSN1Q9NSI8 373 aaKnown RBP7.59□□□□□ -1.19
MSH2-204ENST00000461394 RNF146Q9NTX7 359 aa7.59□□□□□ -1.19
MSH2-204ENST00000461394 IMPACTQ9P2X3 320 aa7.59□□□□□ -1.19
MSH2-204ENST00000461394 RWDD2AQ9UIY3 292 aa7.59□□□□□ -1.19
MSH2-204ENST00000461394 LOXHD1Q8IVV2 1947 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 ZNF536O15090 1300 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 SCN4AP35499 1836 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 POTEFA5A3E0 1075 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 MYMKA6NI61 221 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 E9PMD0 336 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 MEIS1O00470 390 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 VWA5AO00534 786 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 KLRC4O43908 158 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 MED24O75448 989 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 RHOBTB3O94955 611 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 TPM1P09493 284 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 POTEIP0CG38 1075 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 EIF2AK2P19525 551 aaKnown RBP7.58□□□□□ -1.2
MSH2-204ENST00000461394 CIITAP33076 1130 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 CLCN1P35523 988 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 HSD17B4P51659 736 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 CYP4A11Q02928 519 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 SPAG1Q07617 926 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 SEMA3FQ13275 785 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 VGLL4Q14135 290 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 COG2Q14746 738 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 CCDC144BQ3MJ40 725 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 CEP55Q53EZ4 464 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 MUM1L1Q5H9M0 696 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 POTEGQ6S5H5 508 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 POTEEQ6S8J3 1075 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 DLK2Q6UY11 383 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 UNC13DQ70J99 1090 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 ARMC9Q7Z3E5 817 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 CCDC150Q8NCX0 1101 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.58□□□□□ -1.2
MSH2-204ENST00000461394 CYP2W1Q8TAV3 490 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 ETNPPLQ8TBG4 499 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 DDX12PQ92771 950 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 CDCA5Q96FF9 252 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 OTUD5Q96G74 571 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 DHTKD1Q96HY7 919 aaPredicted RBP7.58□□□□□ -1.2
MSH2-204ENST00000461394 C12orf42Q96LP6 360 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 CCDC43Q96MW1 224 aaKnown RBP7.58□□□□□ -1.2
MSH2-204ENST00000461394 CTAGE1Q96RT6 745 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 TSG101Q99816 390 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 ZNF408Q9H9D4 720 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 SLC39A2Q9NP94 309 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 BLOC1S4Q9NUP1 217 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 PANK4Q9NVE7 773 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 DNM3Q9UQ16 869 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 SNCAIPQ9Y6H5 919 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 PTPRFP10586 1907 aa7.58□□□□□ -1.2
MSH2-204ENST00000461394 PVALEFA0A1B0GWK0 134 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 IQCA1LA6NCM1 817 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 TRIM49BA6NDI0 452 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 KCNJ18B7U540 433 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 GRIN3BO60391 1043 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 TBCAO75347 108 aaKnown RBP7.57□□□□□ -1.2
MSH2-204ENST00000461394 ARP10275 920 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 FCER1AP12319 257 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 OSBPP22059 807 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 SFPQP23246 707 aaKnown RBP eCLIP7.57□□□□□ -1.2
MSH2-204ENST00000461394 CCND2P30279 289 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 IRX3P78415 501 aaPredicted RBP7.57□□□□□ -1.2
MSH2-204ENST00000461394 RAD51AP2Q09MP3 1159 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 LRMPQ12912 555 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 PABPC4Q13310 644 aaKnown RBP eCLIP7.57□□□□□ -1.23e-13■□□□□ 10.3
MSH2-204ENST00000461394 KCNJ12Q14500 433 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 ECM1Q16610 540 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 SLC30A10Q6XR72 485 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 CATSPERGQ6ZRH7 1159 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 MIER3Q7Z3K6 550 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 KCNK18Q7Z418 384 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 PPFIBP1Q86W92 1011 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 FAM114A1Q8IWE2 563 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 TPH2Q8IWU9 490 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 ADSSL1Q8N142 457 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 SAMD3Q8N6K7 520 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 GIMAP8Q8ND71 665 aaPredicted RBP7.57□□□□□ -1.2
MSH2-204ENST00000461394 RBM46Q8TBY0 533 aaKnown RBP7.57□□□□□ -1.2
MSH2-204ENST00000461394 SYTL5Q8TDW5 730 aaPredicted RBP7.57□□□□□ -1.2
MSH2-204ENST00000461394 LRRC15Q8TF66 581 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 NOC3LQ8WTT2 800 aaKnown RBP7.57□□□□□ -1.2
MSH2-204ENST00000461394 CRYGNQ8WXF5 182 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 CLEC4DQ8WXI8 215 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 SLC5A5Q92911 643 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 P2RX5Q93086 422 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 LENG9Q96B70 501 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 DYDC2Q96IM9 177 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 NAP1L5Q96NT1 182 aaPredicted RBP7.57□□□□□ -1.2
MSH2-204ENST00000461394 TAAR1Q96RJ0 339 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 EIF2AK1Q9BQI3 630 aaKnown RBP7.57□□□□□ -1.2
MSH2-204ENST00000461394 MXRA8Q9BRK3 442 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 WDR11Q9BZH6 1224 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 KCNF1Q9H3M0 494 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 HOXC10Q9NYD6 342 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 TAB2Q9NYJ8 693 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 MAP3K20Q9NYL2 800 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms