RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 FAM178BQ8IXR5 827 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 PALM2Q8IXS6 379 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 KLHL36Q8N4N3 616 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 ARRDC4Q8NCT1 418 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 RCBTB1Q8NDN9 531 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 PHOSPHO1Q8TCT1 267 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 YTHDC1Q96MU7 727 aaKnown RBP5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 PUS7Q96PZ0 661 aaKnown RBP5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 GMLQ99445 158 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 KRTAP3-1Q9BYR8 98 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 TANGO6Q9C0B7 1094 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 KLC2Q9H0B6 622 aa5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 TMEFF2Q9UIK5 374 aaPredicted RBP5.4□□□□□ -1.54
SPTLC1-203ENST00000461132 TCRBV5S2A0A599 114 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 FZD7O75084 574 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 STK10O94804 968 aaKnown RBP5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 ATP2B1P20020 1258 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 HS1BP3Q53T59 392 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 SLFN13Q68D06 897 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 VASNQ6EMK4 673 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 TMC5Q6UXY8 1006 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 ANKS3Q6ZW76 656 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 SPRED1Q7Z699 444 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 ZNF227Q86WZ6 799 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 CCDC103Q8IW40 242 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 SORCS2Q96PQ0 1159 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 VPS11Q9H270 941 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 SEMA4AQ9H3S1 761 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 PPP4R1LQ9P1A2 415 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 NUB1Q9Y5A7 615 aa5.39□□□□□ -1.55
SPTLC1-203ENST00000461132 CYR61O00622 381 aa5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 SUSD5O60279 629 aa5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 FBXO21O94952 628 aa5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 SCG5P05408 212 aa5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 ICAM4Q14773 271 aa5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 PRSS53Q2L4Q9 553 aa5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 IFNL2Q8IZJ0 200 aa5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 IGDCC4Q8TDY8 1250 aa5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 HNRNPLLQ8WVV9 542 aaKnown RBP5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 C8orf37Q96NL8 207 aa5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 SSBP3Q9BWW4 388 aaPredicted RBP5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 TRIM55Q9BYV6 548 aa5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 SMOC1Q9H4F8 434 aa5.38□□□□□ -1.55
SPTLC1-203ENST00000461132 MUSKO15146 869 aa5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 TBX1O43435 398 aa5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 SELENOPP49908 381 aa5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 MLLT6P55198 1093 aaPredicted RBP5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 NFATC3Q12968 1075 aa5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 ZNF568Q3ZCX4 644 aa5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 EMC4Q5J8M3 183 aa5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 EEPD1Q7L9B9 569 aa5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 RALYLQ86SE5 291 aaKnown RBP5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 CKAP2LQ8IYA6 745 aa5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 KCTD13Q8WZ19 329 aa5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 MRIQ9BWK5 157 aa5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 ST7Q9NRC1 585 aa5.37□□□□□ -1.55
SPTLC1-203ENST00000461132 B2RBV5 119 aa5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 U2SURPO15042 1029 aaKnown RBP5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 TADA3O75528 432 aa5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 LRG1P02750 347 aa5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 LCP1P13796 627 aa5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 GTF2F1P35269 517 aaKnown RBP eCLIP5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 EPHB4P54760 987 aa5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 GFRA1P56159 465 aa5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 CYP4F22Q6NT55 531 aa5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 PKN3Q6P5Z2 889 aa5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 ZFPM1Q8IX07 1006 aa5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 TMEM145Q8NBT3 493 aa5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 DLL4Q9NR61 685 aa5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 FBXL7Q9UJT9 491 aa5.36□□□□□ -1.55
SPTLC1-203ENST00000461132 GPR42O15529 346 aa5.35□□□□□ -1.55
SPTLC1-203ENST00000461132 CANXP27824 592 aaKnown RBP5.35□□□□□ -1.55
SPTLC1-203ENST00000461132 CYP4F3Q08477 520 aa5.35□□□□□ -1.55
SPTLC1-203ENST00000461132 TESK1Q15569 626 aa5.35□□□□□ -1.55
SPTLC1-203ENST00000461132 SF1Q15637 639 aaKnown RBP5.35□□□□□ -1.55
SPTLC1-203ENST00000461132 KREMEN2Q8NCW0 462 aa5.35□□□□□ -1.55
SPTLC1-203ENST00000461132 MICAL1Q8TDZ2 1067 aa5.35□□□□□ -1.55
SPTLC1-203ENST00000461132 ZCCHC14Q8WYQ9 949 aaKnown RBP5.35□□□□□ -1.55
SPTLC1-203ENST00000461132 SCAND2PQ9GZW5 306 aaPredicted RBP5.35□□□□□ -1.55
SPTLC1-203ENST00000461132 EPN3Q9H201 632 aa5.35□□□□□ -1.55
SPTLC1-203ENST00000461132 GJB6O95452 261 aa5.34□□□□□ -1.55
SPTLC1-203ENST00000461132 AMHP03971 560 aa5.34□□□□□ -1.55
SPTLC1-203ENST00000461132 SF3A1Q15459 793 aaKnown RBP5.34□□□□□ -1.55
SPTLC1-203ENST00000461132 SMAD2Q15796 467 aaKnown RBP5.34□□□□□ -1.55
SPTLC1-203ENST00000461132 CRIP3Q6Q6R5 217 aa5.34□□□□□ -1.55
SPTLC1-203ENST00000461132 GIMAP8Q8ND71 665 aaPredicted RBP5.34□□□□□ -1.55
SPTLC1-203ENST00000461132 MBD6Q96DN6 1003 aa5.34□□□□□ -1.55
SPTLC1-203ENST00000461132 ZNF341Q9BYN7 854 aa5.34□□□□□ -1.55
SPTLC1-203ENST00000461132 SLC6A20Q9NP91 592 aa5.34□□□□□ -1.55
SPTLC1-203ENST00000461132 ASH2LQ9UBL3 628 aa5.34□□□□□ -1.55
SPTLC1-203ENST00000461132 SLC27A2O14975 620 aa5.33□□□□□ -1.56
SPTLC1-203ENST00000461132 ZNF623O75123 536 aa5.33□□□□□ -1.56
SPTLC1-203ENST00000461132 GRIN1Q05586 938 aa5.33□□□□□ -1.56
SPTLC1-203ENST00000461132 SPIRE1Q08AE8 756 aa5.33□□□□□ -1.56
SPTLC1-203ENST00000461132 RAB33AQ14088 237 aa5.33□□□□□ -1.56
SPTLC1-203ENST00000461132 DDR2Q16832 855 aa5.33□□□□□ -1.56
SPTLC1-203ENST00000461132 USP53Q70EK8 1073 aa5.33□□□□□ -1.56
SPTLC1-203ENST00000461132 CELF2-AS1Q8N7Q2 184 aa5.33□□□□□ -1.56
SPTLC1-203ENST00000461132 TTLL11Q8NHH1 800 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms