RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 FAM26DQ5JW98 314 aa13.19□□□□□ -0.3
LSG1-204ENST00000460584 PCNX4Q63HM2 1172 aa13.19□□□□□ -0.3
LSG1-204ENST00000460584 SPRED2Q7Z698 418 aa13.19□□□□□ -0.3
LSG1-204ENST00000460584 CATIPQ7Z7H3 387 aa13.19□□□□□ -0.3
LSG1-204ENST00000460584 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
LSG1-204ENST00000460584 TEX2Q8IWB9 1127 aa13.19□□□□□ -0.3
LSG1-204ENST00000460584 GPKOWQ92917 476 aaPredicted RBP eCLIP13.19□□□□□ -0.3
LSG1-204ENST00000460584 HLA-CQ95604 372 aa13.19□□□□□ -0.3
LSG1-204ENST00000460584 GPR20Q99678 358 aa13.19□□□□□ -0.3
LSG1-204ENST00000460584 LZTS2Q9BRK4 669 aa13.19□□□□□ -0.3
LSG1-204ENST00000460584 CERS4Q9HA82 394 aa13.19□□□□□ -0.3
LSG1-204ENST00000460584 SUGCTQ9HAC7 445 aa13.19□□□□□ -0.3
LSG1-204ENST00000460584 INSL6Q9Y581 213 aa13.19□□□□□ -0.3
LSG1-204ENST00000460584 XIRP2A4UGR9 3374 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 C17orf102A2RUQ5 167 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 MEIS2O14770 477 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 SMIM10L2AP0DMW4 78 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 SMIM10L2BP0DMW5 78 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 KCNQ1P51787 676 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 CHMP4BP1P59074 171 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 KRT40Q6A162 431 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 RALYLQ86SE5 291 aaKnown RBP13.18□□□□□ -0.3
LSG1-204ENST00000460584 TMTC2Q8N394 836 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 DBF4BQ8NFT6 615 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 SAMD11Q96NU1 681 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 ZBED2Q9BTP6 218 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 C1QTNF1Q9BXJ1 281 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 RNPEPQ9H4A4 650 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 MLXIPQ9HAP2 919 aa13.18□□□□□ -0.3
LSG1-204ENST00000460584 ARIH1Q9Y4X5 557 aaPredicted RBP13.18□□□□□ -0.3
LSG1-204ENST00000460584 BRWD1Q9NSI6 2320 aa13.17□□□□□ -0.3
LSG1-204ENST00000460584 GNAT1P11488 350 aa13.17□□□□□ -0.3
LSG1-204ENST00000460584 COL9A1P20849 921 aa13.17□□□□□ -0.3
LSG1-204ENST00000460584 COL19A1Q14993 1142 aa13.17□□□□□ -0.3
LSG1-204ENST00000460584 TMCO2Q7Z6W1 182 aaPredicted RBP13.17□□□□□ -0.3
LSG1-204ENST00000460584 FCHSD1Q86WN1 690 aa13.17□□□□□ -0.3
LSG1-204ENST00000460584 MICALL1Q8N3F8 863 aa13.17□□□□□ -0.3
LSG1-204ENST00000460584 ATP6V0A1Q93050 837 aa13.17□□□□□ -0.3
LSG1-204ENST00000460584 TOP1MTQ969P6 601 aa13.17□□□□□ -0.3
LSG1-204ENST00000460584 BCAS3Q9H6U6 928 aa13.17□□□□□ -0.3
LSG1-204ENST00000460584 LY9Q9HBG7 655 aa13.17□□□□□ -0.3
LSG1-204ENST00000460584 MYH7BA7E2Y1 1941 aa13.16□□□□□ -0.3
LSG1-204ENST00000460584 BAZ2BQ9UIF8 2168 aaKnown RBP13.16□□□□□ -0.3
LSG1-204ENST00000460584 TREHO43280 583 aa13.16□□□□□ -0.3
LSG1-204ENST00000460584 AMHP03971 560 aa13.16□□□□□ -0.3
LSG1-204ENST00000460584 KIF5BP33176 963 aa13.16□□□□□ -0.3
LSG1-204ENST00000460584 THPOP40225 353 aa13.16□□□□□ -0.3
LSG1-204ENST00000460584 LIFRP42702 1097 aa13.16□□□□□ -0.3
LSG1-204ENST00000460584 GNAQP50148 359 aa13.16□□□□□ -0.3
LSG1-204ENST00000460584 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
LSG1-204ENST00000460584 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
LSG1-204ENST00000460584 ZNF654Q8IZM8 581 aa13.16□□□□□ -0.3
LSG1-204ENST00000460584 GIMAP8Q8ND71 665 aaPredicted RBP13.16□□□□□ -0.3
LSG1-204ENST00000460584 SEPT8Q92599 483 aa13.16□□□□□ -0.3
LSG1-204ENST00000460584 APBB2Q92870 758 aa13.16□□□□□ -0.3
LSG1-204ENST00000460584 GPRASP2Q96D09 838 aa13.16□□□□□ -0.3
LSG1-204ENST00000460584 NECAB3Q96P71 396 aaPredicted RBP13.16□□□□□ -0.3
LSG1-204ENST00000460584 NRCAMQ92823 1304 aa13.15□□□□□ -0.3
LSG1-204ENST00000460584 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.15□□□□□ -0.3
LSG1-204ENST00000460584 NOP56O00567 594 aaKnown RBP13.15□□□□□ -0.3
LSG1-204ENST00000460584 MAFGO15525 162 aa13.15□□□□□ -0.3
LSG1-204ENST00000460584 FAM43BQ6ZT52 329 aaPredicted RBP13.15□□□□□ -0.3
LSG1-204ENST00000460584 CYFIP1Q7L576 1253 aa13.15□□□□□ -0.3
LSG1-204ENST00000460584 CTCFLQ8NI51 663 aaPredicted RBP13.15□□□□□ -0.3
LSG1-204ENST00000460584 GDPD5Q8WTR4 605 aa13.15□□□□□ -0.3
LSG1-204ENST00000460584 RRP36Q96EU6 259 aaKnown RBP13.15□□□□□ -0.3
LSG1-204ENST00000460584 CDHR1Q96JP9 859 aa13.15□□□□□ -0.3
LSG1-204ENST00000460584 TMEM87BQ96K49 555 aa13.15□□□□□ -0.3
LSG1-204ENST00000460584 EHMT1Q9H9B1 1298 aa13.15□□□□□ -0.3
LSG1-204ENST00000460584 ZNF215Q9UL58 517 aaPredicted RBP13.15□□□□□ -0.3
LSG1-204ENST00000460584 COL4A4P53420 1690 aaPredicted RBP13.15□□□□□ -0.31
LSG1-204ENST00000460584 REV3LO60673 3130 aa13.14□□□□□ -0.31
LSG1-204ENST00000460584 MBLAC1A4D2B0 266 aaPredicted RBP13.14□□□□□ -0.31
LSG1-204ENST00000460584 SH2B2O14492 632 aaPredicted RBP13.14□□□□□ -0.31
LSG1-204ENST00000460584 KCNA2P16389 499 aa13.14□□□□□ -0.31
LSG1-204ENST00000460584 LEXMQ3ZCV2 418 aa13.14□□□□□ -0.31
LSG1-204ENST00000460584 TAF2Q6P1X5 1199 aa13.14□□□□□ -0.31
LSG1-204ENST00000460584 USP17L6PQ6QN14 398 aa13.14□□□□□ -0.31
LSG1-204ENST00000460584 NLRX1Q86UT6 975 aa13.14□□□□□ -0.31
LSG1-204ENST00000460584 SRBD1Q8N5C6 995 aaKnown RBP13.14□□□□□ -0.31
LSG1-204ENST00000460584 MRPL38Q96DV4 380 aaKnown RBP13.14□□□□□ -0.31
LSG1-204ENST00000460584 SETD4Q9NVD3 440 aa13.14□□□□□ -0.31
LSG1-204ENST00000460584 RBM8AQ9Y5S9 174 aaKnown RBP13.14□□□□□ -0.31
LSG1-204ENST00000460584 SIP14410 1827 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 MICAL3Q7RTP6 2002 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 H3BNC9 293 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 RPLP2P05387 115 aaKnown RBP13.13□□□□□ -0.31
LSG1-204ENST00000460584 CALM1P0DP23 149 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 CALM2P0DP24 149 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 CALM3P0DP25 149 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 MCM5P33992 734 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 MGAT3Q09327 533 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 SGMS1Q86VZ5 419 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 SMARCC2Q8TAQ2 1214 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 LMBR1Q8WVP7 490 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 CUL5Q93034 780 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 ZFP91Q96JP5 570 aaPredicted RBP13.13□□□□□ -0.31
LSG1-204ENST00000460584 C17orf80Q9BSJ5 609 aa13.13□□□□□ -0.31
LSG1-204ENST00000460584 OSBPL7Q9BZF2 842 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms