RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 NIM1KQ8IY84 436 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 CARFQ8N187 725 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 NAT16Q8N8M0 369 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 SCLYQ96I15 445 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 ZFYVE21Q9BQ24 234 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 GPR27Q9NS67 375 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 SMPD4Q9NXE4 827 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 FAN1Q9Y2M0 1017 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 PRKAB1Q9Y478 270 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 TRAF6Q9Y4K3 522 aa4.94□□□□□ -1.62
RFC4-211ENST00000460408 TRBV23OR9-2A0A075B6M9 112 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 A0A087X0B3 334 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 NPHP3-ACAD11A0A0J9YXS1 232 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 MSCO60682 206 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 EFCAB14O75071 495 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 DNAJC8O75937 253 aaPredicted RBP4.93□□□□□ -1.62
RFC4-211ENST00000460408 LCP1P13796 627 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 SDSP20132 328 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 CNR2P34972 360 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 MASP1P48740 699 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 IQCEQ6IPM2 695 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 FGD2Q7Z6J4 655 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 B3GNT8Q7Z7M8 397 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 CPNE8Q86YQ8 564 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 RCBTB1Q8NDN9 531 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 NLGN2Q8NFZ4 835 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 MFSD3Q96ES6 412 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 PHF20Q9BVI0 1012 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 SLKQ9H2G2 1235 aaPredicted RBP4.93□□□□□ -1.62
RFC4-211ENST00000460408 INTS7Q9NVH2 962 aaKnown RBP4.93□□□□□ -1.62
RFC4-211ENST00000460408 NDOR1Q9UHB4 597 aa4.93□□□□□ -1.62
RFC4-211ENST00000460408 A0A1W2PQJ5 194 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 C7orf72A4D263 438 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 F8W031 263 aaPredicted RBP4.92□□□□□ -1.62
RFC4-211ENST00000460408 SUV39H1O43463 412 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 TBC1D8O95759 1140 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 ASGR2P07307 311 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 VIL1P09327 827 aaKnown RBP4.92□□□□□ -1.62
RFC4-211ENST00000460408 MC3RP41968 323 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 GJA9P57773 515 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 GPR85P60893 370 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 CPZQ66K79 652 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 BICRALQ6AI39 1079 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 LBX2Q6XYB7 198 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 DHX37Q8IY37 1157 aaKnown RBP4.92□□□□□ -1.62
RFC4-211ENST00000460408 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.92□□□□□ -1.62
RFC4-211ENST00000460408 DDX1Q92499 740 aaKnown RBP4.92□□□□□ -1.62
RFC4-211ENST00000460408 DIO2Q92813 273 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 GPATCH3Q96I76 525 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 C1QTNF3Q9BXJ4 246 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 CDIP1Q9H305 208 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 TMX1Q9H3N1 280 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 FBXL7Q9UJT9 491 aa4.92□□□□□ -1.62
RFC4-211ENST00000460408 TCRBV16S1A1N1A0A5B0 115 aa4.91□□□□□ -1.62
RFC4-211ENST00000460408 ARVCFO00192 962 aa4.91□□□□□ -1.62
RFC4-211ENST00000460408 AQP7O14520 342 aa4.91□□□□□ -1.62
RFC4-211ENST00000460408 RASGRP1O95267 797 aa4.91□□□□□ -1.62
RFC4-211ENST00000460408 CRTAMO95727 393 aa4.91□□□□□ -1.62
RFC4-211ENST00000460408 TAF7LQ5H9L4 462 aa4.91□□□□□ -1.62
RFC4-211ENST00000460408 THNSL2Q86YJ6 484 aa4.91□□□□□ -1.62
RFC4-211ENST00000460408 IFNL3Q8IZI9 196 aa4.91□□□□□ -1.62
RFC4-211ENST00000460408 Q8N1Y9 231 aa4.91□□□□□ -1.62
RFC4-211ENST00000460408 TTC9BQ8N6N2 239 aa4.91□□□□□ -1.62
RFC4-211ENST00000460408 DPF3Q92784 378 aa4.91□□□□□ -1.62
RFC4-211ENST00000460408 IFT57Q9NWB7 429 aa4.91□□□□□ -1.62
RFC4-211ENST00000460408 MAGEC2Q9UBF1 373 aaPredicted RBP4.91□□□□□ -1.62
RFC4-211ENST00000460408 GSG1L2A8MUP6 293 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 WNT9AO14904 365 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 PPP1R11O60927 126 aaPredicted RBP4.9□□□□□ -1.63
RFC4-211ENST00000460408 GLI4P10075 376 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 KCNA6P17658 529 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 POU3F2P20265 443 aaPredicted RBP4.9□□□□□ -1.63
RFC4-211ENST00000460408 RNF187Q5TA31 235 aaPredicted RBP4.9□□□□□ -1.63
RFC4-211ENST00000460408 FILIP1Q7Z7B0 1213 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 LRRTM3Q86VH5 581 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 NLRP10Q86W26 655 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 ALG3Q92685 438 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 TSPAN17Q96FV3 270 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 SAMD11Q96NU1 681 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 TARS2Q9BW92 718 aaKnown RBP4.9□□□□□ -1.63
RFC4-211ENST00000460408 SPC25Q9HBM1 224 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 SRRDQ9UH36 339 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 DBR1Q9UK59 544 aaKnown RBP4.9□□□□□ -1.63
RFC4-211ENST00000460408 PCDHA9Q9Y5H5 950 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 PCDHA8Q9Y5H6 950 aa4.9□□□□□ -1.63
RFC4-211ENST00000460408 PDE8AO60658 829 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 DNAJC6O75061 913 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 ASLP04424 464 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 ZNF20P17024 532 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 TACR1P25103 407 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 IGFALSP35858 605 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 STAT3P40763 770 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 SARSP49591 514 aaKnown RBP4.89□□□□□ -1.63
RFC4-211ENST00000460408 GUCY1A3Q02108 690 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 ZNF460Q14592 562 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 ABHD17CQ6PCB6 329 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 KRT26Q7Z3Y9 468 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 RNF180Q86T96 592 aa4.89□□□□□ -1.63
RFC4-211ENST00000460408 ZNF761Q86XN6 746 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms