RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 KCNV1Q6PIU1 500 aa11.61□□□□□ -0.55
GARNL3-211ENST00000460176 C4orf32Q8N8J7 132 aa11.61□□□□□ -0.55
GARNL3-211ENST00000460176 LENG1Q96BZ8 264 aaPredicted RBP11.61□□□□□ -0.55
GARNL3-211ENST00000460176 ZNF333Q96JL9 665 aa11.61□□□□□ -0.55
GARNL3-211ENST00000460176 FTOQ9C0B1 505 aaKnown RBP eCLIP11.61□□□□□ -0.55
GARNL3-211ENST00000460176 UNC93B1Q9H1C4 597 aa11.61□□□□□ -0.55
GARNL3-211ENST00000460176 TMEM60Q9H2L4 133 aa11.61□□□□□ -0.55
GARNL3-211ENST00000460176 BCAS3Q9H6U6 928 aa11.61□□□□□ -0.55
GARNL3-211ENST00000460176 HMX1Q9NP08 348 aaPredicted RBP11.61□□□□□ -0.55
GARNL3-211ENST00000460176 KCNMB3Q9NPA1 279 aa11.61□□□□□ -0.55
GARNL3-211ENST00000460176 CHMP5Q9NZZ3 219 aa11.61□□□□□ -0.55
GARNL3-211ENST00000460176 FAM184BQ9ULE4 1060 aa11.61□□□□□ -0.55
GARNL3-211ENST00000460176 GNEQ9Y223 722 aaKnown RBP11.61□□□□□ -0.55
GARNL3-211ENST00000460176 PCDHB13Q9Y5F0 798 aa11.61□□□□□ -0.55
GARNL3-211ENST00000460176 TCHHQ07283 1943 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 WDR81Q562E7 1941 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 POTEFA5A3E0 1075 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 IPO5O00410 1097 aaKnown RBP11.6□□□□□ -0.55
GARNL3-211ENST00000460176 TBX3O15119 743 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 CCL5P13501 91 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 TNFAIP2Q03169 654 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 ARHGAP1Q07960 439 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 MTFR1Q15390 333 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 HAS1Q92839 578 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 COPS5Q92905 334 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 SLC5A5Q92911 643 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 MTMR9Q96QG7 549 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 UIMC1Q96RL1 719 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 ZNF577Q9BSK1 485 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.6□□□□□ -0.55
GARNL3-211ENST00000460176 PAK6Q9NQU5 681 aaPredicted RBP11.6□□□□□ -0.55
GARNL3-211ENST00000460176 PKD2L1Q9P0L9 805 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 PCDHB8Q9UN66 801 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 CLIC4Q9Y696 253 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 NFASCO94856 1347 aa11.6□□□□□ -0.55
GARNL3-211ENST00000460176 HAX1O00165 279 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 NKRFO15226 690 aaKnown RBP eCLIP11.59□□□□□ -0.55
GARNL3-211ENST00000460176 DHX15O43143 795 aaKnown RBP11.59□□□□□ -0.55
GARNL3-211ENST00000460176 DUSP11O75319 330 aaKnown RBP11.59□□□□□ -0.55
GARNL3-211ENST00000460176 GGPS1O95749 300 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 ATP2C1P98194 919 aaPredicted RBP11.59□□□□□ -0.55
GARNL3-211ENST00000460176 DNM1Q05193 864 aaKnown RBP11.59□□□□□ -0.55
GARNL3-211ENST00000460176 PTGDRQ13258 359 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 PTPAQ15257 358 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 SF3A1Q15459 793 aaKnown RBP11.59□□□□□ -0.55
GARNL3-211ENST00000460176 CALCRLQ16602 461 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 FOXD4L6Q3SYB3 417 aaPredicted RBP11.59□□□□□ -0.55
GARNL3-211ENST00000460176 CELF3Q5SZQ8 465 aaKnown RBP11.59□□□□□ -0.55
GARNL3-211ENST00000460176 ANO1Q5XXA6 986 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 LHX8Q68G74 356 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 FOXD4L3Q6VB84 417 aaPredicted RBP11.59□□□□□ -0.55
GARNL3-211ENST00000460176 GIMAP8Q8ND71 665 aaPredicted RBP11.59□□□□□ -0.55
GARNL3-211ENST00000460176 GJA10Q969M2 543 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 CHAMP1Q96JM3 812 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 FAM20AQ96MK3 541 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 USP28Q96RU2 1077 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 RIT2Q99578 217 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 SENP7Q9BQF6 1050 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 DDX20Q9UHI6 824 aaKnown RBP11.59□□□□□ -0.55
GARNL3-211ENST00000460176 Q9Y3F1 56 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 SYNRGQ9UMZ2 1314 aa11.59□□□□□ -0.55
GARNL3-211ENST00000460176 CTAGE5O15320 804 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 PSMD10O75832 226 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 FARP2O94887 1054 aaPredicted RBP11.58□□□□□ -0.56
GARNL3-211ENST00000460176 MYCP01106 439 aaPredicted RBP11.58□□□□□ -0.56
GARNL3-211ENST00000460176 GH1P01241 217 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 OR52Z1P0C646 297 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 NASPP49321 788 aaPredicted RBP11.58□□□□□ -0.56
GARNL3-211ENST00000460176 NEDD9Q14511 834 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 LRCH2Q5VUJ6 765 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 ATL3Q6DD88 541 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 METTL7BQ6UX53 244 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 B3GNT9Q6UX72 402 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 TLK2Q86UE8 772 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 DHX37Q8IY37 1157 aaKnown RBP11.58□□□□□ -0.56
GARNL3-211ENST00000460176 OR6J1Q8NGC5 347 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 EMID1Q96A84 441 aaPredicted RBP11.58□□□□□ -0.56
GARNL3-211ENST00000460176 ZNF396Q96N95 335 aaPredicted RBP11.58□□□□□ -0.56
GARNL3-211ENST00000460176 UPF3AQ9H1J1 476 aaKnown RBP11.58□□□□□ -0.56
GARNL3-211ENST00000460176 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 TFIP11Q9UBB9 837 aaKnown RBP11.58□□□□□ -0.56
GARNL3-211ENST00000460176 VAV3Q9UKW4 847 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 TELO2Q9Y4R8 837 aa11.58□□□□□ -0.56
GARNL3-211ENST00000460176 MYADML2A6NDP7 307 aa11.57□□□□□ -0.56
GARNL3-211ENST00000460176 DDX39AO00148 427 aaKnown RBP11.57□□□□□ -0.56
GARNL3-211ENST00000460176 LAD1O00515 517 aa11.57□□□□□ -0.56
GARNL3-211ENST00000460176 SORBS3O60504 671 aa11.57□□□□□ -0.56
GARNL3-211ENST00000460176 MSCO60682 206 aa11.57□□□□□ -0.56
GARNL3-211ENST00000460176 GAS7O60861 476 aa11.57□□□□□ -0.56
GARNL3-211ENST00000460176 ADAMTS4O75173 837 aa11.57□□□□□ -0.56
GARNL3-211ENST00000460176 BAG4O95429 457 aaKnown RBP11.57□□□□□ -0.56
GARNL3-211ENST00000460176 BMP15O95972 392 aa11.57□□□□□ -0.56
GARNL3-211ENST00000460176 CCNE2O96020 404 aa11.57□□□□□ -0.56
GARNL3-211ENST00000460176 RARBP10826 455 aa11.57□□□□□ -0.56
GARNL3-211ENST00000460176 TXKP42681 527 aa11.57□□□□□ -0.56
GARNL3-211ENST00000460176 GJA9P57773 515 aa11.57□□□□□ -0.56
GARNL3-211ENST00000460176 NKX3-2P78367 333 aa11.57□□□□□ -0.56
GARNL3-211ENST00000460176 IRX5P78411 483 aaPredicted RBP11.57□□□□□ -0.56
GARNL3-211ENST00000460176 CEBPZQ03701 1054 aaKnown RBP11.57□□□□□ -0.56
GARNL3-211ENST00000460176 SPIRE1Q08AE8 756 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms