RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 POLR2MP0CAP2 368 aa11.36□□□□□ -0.59
SYN3-205ENST00000459990 SMIM10L2AP0DMW4 78 aa11.36□□□□□ -0.59
SYN3-205ENST00000459990 SMIM10L2BP0DMW5 78 aa11.36□□□□□ -0.59
SYN3-205ENST00000459990 ERVK-21P61565 698 aa11.36□□□□□ -0.59
SYN3-205ENST00000459990 WTAPQ15007 396 aa11.36□□□□□ -0.59
SYN3-205ENST00000459990 SAMD3Q8N6K7 520 aa11.36□□□□□ -0.59
SYN3-205ENST00000459990 DBF4BQ8NFT6 615 aa11.36□□□□□ -0.59
SYN3-205ENST00000459990 GPR20Q99678 358 aa11.36□□□□□ -0.59
SYN3-205ENST00000459990 C17orf80Q9BSJ5 609 aa11.36□□□□□ -0.59
SYN3-205ENST00000459990 TUT1Q9H6E5 874 aaKnown RBP11.36□□□□□ -0.59
SYN3-205ENST00000459990 LY9Q9HBG7 655 aa11.36□□□□□ -0.59
SYN3-205ENST00000459990 RTEL1Q9NZ71 1219 aa11.36□□□□□ -0.59
SYN3-205ENST00000459990 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.35□□□□□ -0.59
SYN3-205ENST00000459990 MEIS2O14770 477 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 PLEKHA8P1O95397 391 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 CTSHP09668 335 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 ICAM3P32942 547 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 THPOP40225 353 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 IRX6P78412 446 aaPredicted RBP11.35□□□□□ -0.59
SYN3-205ENST00000459990 ADAM17P78536 824 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 HTRA4P83105 476 aaPredicted RBP11.35□□□□□ -0.59
SYN3-205ENST00000459990 TRDNQ13061 729 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 PLEKHG4Q58EX7 1191 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 KCNV1Q6PIU1 500 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 USP17L6PQ6QN14 398 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 MYOCDQ8IZQ8 938 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 CMTR1Q8N1G2 835 aaKnown RBP11.35□□□□□ -0.59
SYN3-205ENST00000459990 IL27Q8NEV9 243 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 NCOA7Q8NI08 942 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 SP7Q8TDD2 431 aaPredicted RBP11.35□□□□□ -0.59
SYN3-205ENST00000459990 ATP6V0A1Q93050 837 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 RAD9AQ99638 391 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
SYN3-205ENST00000459990 RNPEPQ9H4A4 650 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 MLXIPQ9HAP2 919 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 CD320Q9NPF0 282 aa11.35□□□□□ -0.59
SYN3-205ENST00000459990 RBM8AQ9Y5S9 174 aaKnown RBP11.35□□□□□ -0.59
SYN3-205ENST00000459990 U3KPZ7 1027 aaPredicted RBP11.35□□□□□ -0.59
SYN3-205ENST00000459990 C17orf102A2RUQ5 167 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 RSPH10B2B2RC85 870 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 SPATA31C2B4DYI2 1134 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 RSPH10BP0C881 870 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 TGFB3P10600 412 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 RXRAP19793 462 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 IKBKEQ14164 716 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 METTL7BQ6UX53 244 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 CYFIP1Q7L576 1253 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 RALYLQ86SE5 291 aaKnown RBP11.34□□□□□ -0.59
SYN3-205ENST00000459990 ZNF654Q8IZM8 581 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 MAP4K1Q92918 833 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 HLA-CQ95604 372 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 TGS1Q96RS0 853 aaKnown RBP11.34□□□□□ -0.59
SYN3-205ENST00000459990 ZBED2Q9BTP6 218 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 SPZ1Q9BXG8 430 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 C11orf16Q9NQ32 467 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 SETD4Q9NVD3 440 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 COG5Q9UP83 839 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 EMSYQ7Z589 1322 aa11.34□□□□□ -0.59
SYN3-205ENST00000459990 FIBPO43427 364 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 ATP9AO75110 1047 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 LINC00271P0C7V0 271 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 SP4Q02446 784 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 AAK1Q2M2I8 961 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 PCNX4Q63HM2 1172 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 RUFY4Q6ZNE9 571 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 RAB11FIP4Q86YS3 637 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 SRBD1Q8N5C6 995 aaKnown RBP11.33□□□□□ -0.6
SYN3-205ENST00000459990 LMBR1Q8WVP7 490 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 EPHX3Q9H6B9 360 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 MYO7AQ13402 2215 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 PLXNA4Q9HCM2 1894 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 WDR81Q562E7 1941 aa11.33□□□□□ -0.6
SYN3-205ENST00000459990 TTC3P53804 2025 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 hCG_1642624A0A1W2PR95 340 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 ERICH2A1L162 156 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 PIK3CDO00329 1044 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 NOP56O00567 594 aaKnown RBP11.32□□□□□ -0.6
SYN3-205ENST00000459990 SH2B2O14492 632 aaPredicted RBP11.32□□□□□ -0.6
SYN3-205ENST00000459990 EFCAB14O75071 495 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 DDAH1O94760 285 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 KCNA2P16389 499 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 MGAT3Q09327 533 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 UBE2SQ16763 222 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 GNPTABQ3T906 1256 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 CATIPQ7Z7H3 387 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 SKAP1Q86WV1 359 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 RUFY2Q8WXA3 655 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 ZBTB10Q96DT7 871 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 LSG1Q9H089 658 aaKnown RBP11.32□□□□□ -0.6
SYN3-205ENST00000459990 UBE2ZQ9H832 354 aaPredicted RBP11.32□□□□□ -0.6
SYN3-205ENST00000459990 LMCD1Q9NZU5 365 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 INSL6Q9Y581 213 aa11.32□□□□□ -0.6
SYN3-205ENST00000459990 TRIOO75962 3097 aa11.31□□□□□ -0.6
SYN3-205ENST00000459990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
SYN3-205ENST00000459990 PRC1O43663 620 aa11.31□□□□□ -0.6
SYN3-205ENST00000459990 STAM2O75886 525 aa11.31□□□□□ -0.6
SYN3-205ENST00000459990 AMHP03971 560 aa11.31□□□□□ -0.6
SYN3-205ENST00000459990 ITGB5P18084 799 aa11.31□□□□□ -0.6
SYN3-205ENST00000459990 ARHGAP4P98171 946 aa11.31□□□□□ -0.6
SYN3-205ENST00000459990 NEDD9Q14511 834 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms