RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 RXRGP48443 463 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 AMPHP49418 695 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 ATP11AP98196 1134 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 HYAL2Q12891 473 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 GRB10Q13322 594 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 SEPT7Q16181 437 aaKnown RBP5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 PDCD2Q16342 344 aaPredicted RBP5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 TMEM240Q5SV17 173 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 GDF6Q6KF10 455 aaPredicted RBP5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 IGF2-ASQ6U949 168 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 LDHAL6AQ6ZMR3 332 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 MYLK4Q86YV6 388 aaPredicted RBP5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 SCUBE1Q8IWY4 988 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 OR8H2Q8N162 312 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 CHCHD4Q8N4Q1 142 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 CPA6Q8N4T0 437 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 IL22RA1Q8N6P7 574 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 SPATA5Q8NB90 893 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 CCT6BQ92526 530 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 EIF2AK1Q9BQI3 630 aaKnown RBP5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 SUCOQ9UBS9 1254 aaKnown RBP5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 PCDHB14Q9Y5E9 798 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 PCDHGB3Q9Y5G1 929 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 TOPAZ1Q8N9V7 1692 aa5.68□□□□□ -1.5
SPARCL1-204ENST00000458304 PLEKHH1Q9ULM0 1364 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 MAP2P11137 1827 aaKnown RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 USP6P35125 1406 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 BLMP54132 1417 aaPredicted RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 CPSF1Q10570 1443 aaKnown RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 TRAV20A0A0B4J274 112 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 K7ENM7 598 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 TM4SF5O14894 197 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 FYB1O15117 783 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 KPNA6O60684 536 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 ATE1O95260 518 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 LTFP02788 710 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 FAM200BP0CF97 657 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 MYBL2P10244 700 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 TGFB3P10600 412 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 HSD3B1P14060 373 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 ZKSCAN1P17029 563 aaPredicted RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 BPIP17213 487 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 MAPK9P45984 424 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 RBM10P98175 930 aaKnown RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 LRRFIP1Q32MZ4 808 aaKnown RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 PEAR1Q5VY43 1037 aaPredicted RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 C1orf122Q6ZSJ8 110 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 SKAP1Q86WV1 359 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 CBARPQ8N350 705 aaPredicted RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 CEP120Q8N960 986 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 NAXEQ8NCW5 288 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 WFDC12Q8WWY7 111 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 RSPH1Q8WYR4 309 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 FUBP3Q96I24 572 aaKnown RBP eCLIP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 PAWRQ96IZ0 340 aaKnown RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 LRGUKQ96M69 825 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 PPM1MQ96MI6 270 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 NECAB3Q96P71 396 aaPredicted RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 NAA15Q9BXJ9 866 aaKnown RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 RASSF4Q9H2L5 321 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 PHAXQ9H814 394 aaKnown RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 LIN7BQ9HAP6 207 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 KIAA1586Q9HCI6 787 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 ARHGEF4Q9NR80 690 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 TRMT13Q9NUP7 481 aaKnown RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 USP21Q9UK80 565 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 ISY1Q9ULR0 285 aaKnown RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 NPHP3Q7Z494 1330 aa5.67□□□□□ -1.5
SPARCL1-204ENST00000458304 FAM170AA1A519 330 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 TTC36A6NLP5 189 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 DDX3YO15523 660 aaKnown RBP5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 H2AFB1P0C5Y9 115 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 H2AFB2P0C5Z0 115 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 NOS3P29474 1203 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 ALDH5A1P51649 535 aaPredicted RBP5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 SUMO1P63165 101 aaKnown RBP5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 ZBED6P86452 979 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 TRIM14Q14142 442 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 TRIM61Q5EBN2 209 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 OTOP3Q7RTS5 596 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 SAPCD2Q86UD0 394 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 PNMA8AQ86V59 439 aaPredicted RBP5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 TAB3Q8N5C8 712 aaPredicted RBP5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 OR2W6PQ8NHA6 318 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 TRIM63Q969Q1 353 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 NUP88Q99567 741 aaPredicted RBP5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 MTFR1LQ9H019 292 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 CHMP4BQ9H444 224 aaKnown RBP5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 TRIM39Q9HCM9 518 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 CRTAC1Q9NQ79 661 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 C1orf112Q9NSG2 853 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 SALL4Q9UJQ4 1053 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 ACAD8Q9UKU7 415 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 PCDHB5Q9Y5E4 795 aa5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 TNPO3Q9Y5L0 923 aaKnown RBP5.66□□□□□ -1.5
SPARCL1-204ENST00000458304 PTPRUQ92729 1446 aa5.65□□□□□ -1.5
SPARCL1-204ENST00000458304 CDK12Q9NYV4 1490 aaPredicted RBP5.65□□□□□ -1.5
SPARCL1-204ENST00000458304 LRRC7Q96NW7 1537 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms