RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 HPS3Q969F9 1004 aa12.1□□□□□ -0.47
RFX3-211ENST00000458034 MKL1Q969V6 931 aa12.1□□□□□ -0.47
RFX3-211ENST00000458034 KANSL2Q9H9L4 492 aa12.1□□□□□ -0.47
RFX3-211ENST00000458034 CEP72Q9P209 647 aa12.1□□□□□ -0.47
RFX3-211ENST00000458034 HYOU1Q9Y4L1 999 aa12.1□□□□□ -0.47
RFX3-211ENST00000458034 COL11A2P13942 1736 aaPredicted RBP12.09□□□□□ -0.47
RFX3-211ENST00000458034 A0A0U1RQG5 324 aaPredicted RBP12.09□□□□□ -0.47
RFX3-211ENST00000458034 TRAF5O00463 557 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 ENC1O14682 589 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 FOSP01100 380 aaPredicted RBP12.09□□□□□ -0.47
RFX3-211ENST00000458034 SSBP05455 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
RFX3-211ENST00000458034 PLA2G4BP0C869 781 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 EIF4A3P38919 411 aaKnown RBP12.09□□□□□ -0.47
RFX3-211ENST00000458034 EPS15P42566 896 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 CRKP46108 304 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 MARSP56192 900 aaKnown RBP12.09□□□□□ -0.47
RFX3-211ENST00000458034 QRICH1Q2TAL8 776 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 SLC9C1Q4G0N8 1177 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 SLFN13Q68D06 897 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 TTBK2Q6IQ55 1244 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 RRAGAQ7L523 313 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 ZNF572Q7Z3I7 529 aaPredicted RBP12.09□□□□□ -0.47
RFX3-211ENST00000458034 GPBP1Q86WP2 473 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 NLGN1Q8N2Q7 840 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 RNF10Q8N5U6 811 aaKnown RBP12.09□□□□□ -0.47
RFX3-211ENST00000458034 KCTD17Q8N5Z5 321 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 GOLGA6L1Q8N7Z2 621 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 HAS1Q92839 578 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 DNAJC19Q96DA6 116 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 ZDHHC15Q96MV8 337 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 MBOAT7Q96N66 472 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 ANO3Q9BYT9 981 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 PDE11AQ9HCR9 933 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 JADE2Q9NQC1 790 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 FAM207AQ9NSI2 230 aaPredicted RBP12.09□□□□□ -0.47
RFX3-211ENST00000458034 CWC15Q9P013 229 aaKnown RBP12.09□□□□□ -0.47
RFX3-211ENST00000458034 SNX12Q9UMY4 172 aa12.09□□□□□ -0.47
RFX3-211ENST00000458034 LOXHD1Q8IVV2 1947 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 MACROD2A1Z1Q3 448 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 ERICH4A6NGS2 130 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 LRRC53A6NM62 1247 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 CETN3O15182 167 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 EDIL3O43854 480 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 PPP1R11O60927 126 aaPredicted RBP12.08□□□□□ -0.48
RFX3-211ENST00000458034 SERPING1P05155 500 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 SLC1A4P43007 532 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 PAFAH1B1P43034 410 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 TNNT3P45378 269 aaPredicted RBP12.08□□□□□ -0.48
RFX3-211ENST00000458034 CDC37Q16543 378 aaPredicted RBP12.08□□□□□ -0.48
RFX3-211ENST00000458034 EDRF1Q3B7T1 1238 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 CERKLQ49MI3 558 aaPredicted RBP12.08□□□□□ -0.48
RFX3-211ENST00000458034 ZCWPW2Q504Y3 356 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 CCDC181Q5TID7 509 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 SFMBT2Q5VUG0 894 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 KCTD1Q719H9 257 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 PODNQ7Z5L7 613 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 MMGT1Q8N4V1 131 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 BAP1Q92560 729 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 MASTLQ96GX5 879 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 CAPZA3Q96KX2 299 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 NOX5Q96PH1 765 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 MMS19Q96T76 1030 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 NUDT12Q9BQG2 462 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 LSM14BQ9BX40 385 aaKnown RBP12.08□□□□□ -0.48
RFX3-211ENST00000458034 LACRTQ9GZZ8 138 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 KCNMB3Q9NPA1 279 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 ARHGAP20Q9P2F6 1191 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 PI4KBQ9UBF8 816 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 HDAC6Q9UBN7 1215 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 RNF14Q9UBS8 474 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.08□□□□□ -0.48
RFX3-211ENST00000458034 MYH10P35580 1976 aa12.08□□□□□ -0.48
RFX3-211ENST00000458034 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 RCCD1A6NED2 376 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 CALUO43852 315 aaPredicted RBP12.07□□□□□ -0.48
RFX3-211ENST00000458034 SLC16A2P36021 539 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 SCNN1DP51172 638 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 CYP27A1Q02318 531 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 DOK7Q18PE1 504 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 Q4G0T1 1027 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 TDRD12Q587J7 1177 aaKnown RBP12.07□□□□□ -0.48
RFX3-211ENST00000458034 APOBEC3HQ6NTF7 200 aaKnown RBP12.07□□□□□ -0.48
RFX3-211ENST00000458034 KCNK18Q7Z418 384 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 CLEC10AQ8IUN9 316 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 ZC3H3Q8IXZ2 948 aaKnown RBP12.07□□□□□ -0.48
RFX3-211ENST00000458034 FLAD1Q8NFF5 587 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 CCDC102AQ96A19 550 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 AMNQ9BXJ7 453 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 VPS18Q9P253 973 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 SYNPO2Q9UMS6 1093 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 KIAA1024Q9UPX6 916 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 PCDHA1Q9Y5I3 950 aa12.07□□□□□ -0.48
RFX3-211ENST00000458034 COL2A1P02458 1487 aaPredicted RBP12.07□□□□□ -0.48
RFX3-211ENST00000458034 FRMD3A2A2Y4 597 aa12.06□□□□□ -0.48
RFX3-211ENST00000458034 SPDYE3A6NKU9 549 aa12.06□□□□□ -0.48
RFX3-211ENST00000458034 H3BQF6 201 aa12.06□□□□□ -0.48
RFX3-211ENST00000458034 RBAK-RBAKDNI3L0D1 243 aa12.06□□□□□ -0.48
RFX3-211ENST00000458034 EEF2P13639 858 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms