RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 TLK2Q86UE8 772 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 FERMT3Q86UX7 667 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 HAS1Q92839 578 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 SLC5A5Q92911 643 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 XPNPEP3Q9NQH7 507 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 TBC1D22BQ9NU19 505 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 ZDHHC9Q9Y397 364 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 BRCA2P51587 3418 aa13.34□□□□□ -0.27
TRAPPC12-212ENST00000457845 PSMD10O75832 226 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 HOXD8P13378 290 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 MNX1P50219 401 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 LRRC41Q15345 812 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 B3GNT9Q6UX72 402 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 DHX37Q8IY37 1157 aaKnown RBP13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 C4orf32Q8N8J7 132 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 ANKLE1Q8NAG6 615 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 ARRDC4Q8NCT1 418 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 OR6J1Q8NGC5 347 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 FAM20AQ96MK3 541 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 MTMR9Q96QG7 549 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 RIT2Q99578 217 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 ZNF577Q9BSK1 485 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 AP5M1Q9H0R1 490 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 PCDHB6Q9Y5E3 794 aa13.33□□□□□ -0.28
TRAPPC12-212ENST00000457845 MYADML2A6NDP7 307 aa13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 ATG7O95352 703 aa13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 F13A1P00488 732 aa13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 PGK1P00558 417 aa13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 IRX5P78411 483 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 HSDL1Q3SXM5 330 aa13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 CYFIP1Q7L576 1253 aa13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 PPTC7Q8NI37 304 aa13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 TSEN34Q9BSV6 310 aaKnown RBP13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 MLXIPQ9HAP2 919 aa13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 SPC25Q9HBM1 224 aa13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 TRIP12Q14669 1992 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC12-212ENST00000457845 DNM1LO00429 736 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 NEMFO60524 1076 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 PPFIA4O75335 1185 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 TFRCP02786 760 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 MMP3P08254 477 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 C6orf222P0C671 652 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 ATP2B1P20020 1258 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 MCM7P33993 719 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 CPT1AP50416 773 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 NBR1Q14596 966 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 ZNF174Q15697 407 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 FSCN1Q16658 493 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 RNF180Q86T96 592 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 SLFN12Q8IYM2 578 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 PCSK9Q8NBP7 692 aaKnown RBP13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 AFG1LQ8WV93 481 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 GPR20Q99678 358 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 SDF4Q9BRK5 362 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 TMEM60Q9H2L4 133 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 JPH1Q9HDC5 661 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 PKD2L1Q9P0L9 805 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 SLC9A2Q9UBY0 812 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 TELO2Q9Y4R8 837 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 ALPK3Q96L96 1907 aa13.31□□□□□ -0.28
TRAPPC12-212ENST00000457845 GSTTP1A0A1W2PQM5 241 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 LAD1O00515 517 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 CCNE2O96020 404 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 NUCB2P80303 420 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 BEX3Q00994 111 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 SPIRE1Q08AE8 756 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 GNASQ5JWF2 1037 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 LRCH2Q5VUJ6 765 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 ZNF746Q6NUN9 644 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 FAM173BQ6P4H8 233 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 UBE2Q1Q7Z7E8 422 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 GJA10Q969M2 543 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 SPATA33Q96N06 139 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 IPO9Q96P70 1041 aaKnown RBP13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 PHF24Q9UPV7 400 aa13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 MORC2Q9Y6X9 1032 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC12-212ENST00000457845 IGKV6D-21A0A0A0MT36 114 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 MOXD2PA6NHM9 499 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 KPNA6O60684 536 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 GAS7O60861 476 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 BAG4O95429 457 aaKnown RBP13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 ASGR1P07306 291 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 COL6A1P12109 1028 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 EN2P19622 333 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 PRPHP41219 470 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 ACTR2P61160 394 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 ATP2C1P98194 919 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 PURAQ00577 322 aaKnown RBP13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 KRT76Q01546 638 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 PTGDRQ13258 359 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 PPP2R5CQ13362 524 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 KCNA10Q16322 511 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 CALCRLQ16602 461 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 BRDTQ58F21 947 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 ABHD15Q6UXT9 468 aa13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 SMAP1Q8IYB5 467 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC12-212ENST00000457845 SEPT1Q8WYJ6 367 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms