RNA–Protein interactions for RNA: ENST00000456330.1

TSC22D4-204, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-204ENST00000456330 SP4Q02446 784 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 PTPN11Q06124 597 aaPredicted RBP16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 LAMC2Q13753 1193 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 HIC1Q14526 733 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 PTGISQ16647 500 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 KIAA0753Q2KHM9 967 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 PCNX4Q63HM2 1172 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 SYNE3Q6ZMZ3 975 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 DEFB128Q7Z7B8 93 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 TRIM50Q86XT4 487 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 PPM1EQ8WY54 764 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 BRF1Q92994 677 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 WNT8BQ93098 351 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 RBM28Q9NW13 759 aaKnown RBP16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 HDAC6Q9UBN7 1215 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 GTF2IRD1Q9UHL9 959 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 NOD1Q9Y239 953 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 NID2Q14112 1375 aa16.74■□□□□ 0.27
TSC22D4-204ENST00000456330 PPFIA3O75145 1194 aa16.73■□□□□ 0.27
TSC22D4-204ENST00000456330 POU3F3P20264 500 aaPredicted RBP16.73■□□□□ 0.27
TSC22D4-204ENST00000456330 MRPS5P82675 430 aaKnown RBP16.73■□□□□ 0.27
TSC22D4-204ENST00000456330 GNPTABQ3T906 1256 aa16.73■□□□□ 0.27
TSC22D4-204ENST00000456330 PSTPIP2Q9H939 334 aa16.73■□□□□ 0.27
TSC22D4-204ENST00000456330 PKD2L1Q9P0L9 805 aa16.73■□□□□ 0.27
TSC22D4-204ENST00000456330 NLRC5Q86WI3 1866 aa16.73■□□□□ 0.27
TSC22D4-204ENST00000456330 MYH9P35579 1960 aaKnown RBP16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 ZBBXA8MT70 800 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 STXBP3O00186 592 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 HAS3O00219 553 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 FIBPO43427 364 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 LGALS2P05162 132 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 IQCF3P0C7M6 154 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 IGFBP4P22692 258 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 RPS6KB1P23443 525 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 METAP2P50579 478 aaKnown RBP eCLIP16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 NAPAP54920 295 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 FGD1P98174 961 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 ZNF200P98182 395 aaPredicted RBP16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 KCNV1Q6PIU1 500 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 BLOC1S2Q6QNY1 142 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 CYFIP1Q7L576 1253 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 SESTD1Q86VW0 696 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 ADAMTS19Q8TE59 1207 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 SLC9A7Q96T83 725 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 C16orf70Q9BSU1 422 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 KATNAL1Q9BW62 490 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 MLXIPQ9HAP2 919 aa16.72■□□□□ 0.27
TSC22D4-204ENST00000456330 BRWD1Q9NSI6 2320 aa16.71■□□□□ 0.27
TSC22D4-204ENST00000456330 SPATA31C2B4DYI2 1134 aa16.71■□□□□ 0.27
TSC22D4-204ENST00000456330 ADAMTS3O15072 1205 aa16.71■□□□□ 0.27
TSC22D4-204ENST00000456330 REC8O95072 547 aa16.71■□□□□ 0.27
TSC22D4-204ENST00000456330 CA3P07451 260 aa16.71■□□□□ 0.27
TSC22D4-204ENST00000456330 HMGB1P09429 215 aaKnown RBP16.71■□□□□ 0.27
TSC22D4-204ENST00000456330 ICAM3P32942 547 aa16.71■□□□□ 0.27
TSC22D4-204ENST00000456330 CCDC85BQ15834 202 aaPredicted RBP16.71■□□□□ 0.27
TSC22D4-204ENST00000456330 METTL7BQ6UX53 244 aa16.71■□□□□ 0.27
TSC22D4-204ENST00000456330 C7orf31Q8N865 590 aa16.71■□□□□ 0.27
TSC22D4-204ENST00000456330 PHOSPHO2Q8TCD6 241 aa16.71■□□□□ 0.27
TSC22D4-204ENST00000456330 TMEM260Q9NX78 707 aa16.71■□□□□ 0.27
TSC22D4-204ENST00000456330 ATG2AQ2TAZ0 1938 aa16.7■□□□□ 0.26
TSC22D4-204ENST00000456330 SPDYE3A6NKU9 549 aa16.7■□□□□ 0.26
TSC22D4-204ENST00000456330 NOP56O00567 594 aaKnown RBP16.7■□□□□ 0.26
TSC22D4-204ENST00000456330 STAM2O75886 525 aa16.7■□□□□ 0.26
TSC22D4-204ENST00000456330 ACTN1P12814 892 aa16.7■□□□□ 0.26
TSC22D4-204ENST00000456330 ITGB5P18084 799 aa16.7■□□□□ 0.26
TSC22D4-204ENST00000456330 ADD1P35611 737 aaKnown RBP16.7■□□□□ 0.26
TSC22D4-204ENST00000456330 RBL2Q08999 1139 aa16.7■□□□□ 0.26
TSC22D4-204ENST00000456330 GPR20Q99678 358 aa16.7■□□□□ 0.26
TSC22D4-204ENST00000456330 PCDHA6Q9UN73 950 aa16.7■□□□□ 0.26
TSC22D4-204ENST00000456330 PCDHA8Q9Y5H6 950 aa16.7■□□□□ 0.26
TSC22D4-204ENST00000456330 V9GY48 417 aaPredicted RBP16.7■□□□□ 0.26
TSC22D4-204ENST00000456330 ATP9AO75110 1047 aa16.69■□□□□ 0.26
TSC22D4-204ENST00000456330 BAIAP3O94812 1187 aa16.69■□□□□ 0.26
TSC22D4-204ENST00000456330 TGFB3P10600 412 aa16.69■□□□□ 0.26
TSC22D4-204ENST00000456330 KCNA2P16389 499 aa16.69■□□□□ 0.26
TSC22D4-204ENST00000456330 ADCY7P51828 1080 aa16.69■□□□□ 0.26
TSC22D4-204ENST00000456330 BFSP2Q13515 415 aa16.69■□□□□ 0.26
TSC22D4-204ENST00000456330 PPP1R18Q6NYC8 613 aa16.69■□□□□ 0.26
TSC22D4-204ENST00000456330 CAGE1Q8TC20 777 aa16.69■□□□□ 0.26
TSC22D4-204ENST00000456330 UHRF1Q96T88 793 aaPredicted RBP16.69■□□□□ 0.26
TSC22D4-204ENST00000456330 ANO3Q9BYT9 981 aa16.69■□□□□ 0.26
TSC22D4-204ENST00000456330 NCOA5Q9HCD5 579 aaKnown RBP16.69■□□□□ 0.26
TSC22D4-204ENST00000456330 KIAA1671Q9BY89 1806 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 EPOPA6NHQ4 379 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 ARHGEF15O94989 841 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 RCAN1P53805 252 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 GPNMBQ14956 572 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 TCTN1Q2MV58 587 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 TRIM71Q2Q1W2 868 aaKnown RBP16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 UTP14CQ5TAP6 766 aaKnown RBP16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 LRRC8DQ7L1W4 858 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 HERC6Q8IVU3 1022 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 AFAP1L1Q8TED9 768 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 PHKBQ93100 1093 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 GPRASP2Q96D09 838 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 LARP6Q9BRS8 491 aaKnown RBP16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 AGXT2Q9BYV1 514 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 UPF3BQ9BZI7 483 aaKnown RBP16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 RIC8AQ9NPQ8 531 aa16.68■□□□□ 0.26
TSC22D4-204ENST00000456330 PPP4R2Q9NY27 417 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms