RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 RAD9BQ6WBX8 426 aa13.35□□□□□ -0.27
NEDD4L-208ENST00000456173 TTC17Q96AE7 1141 aa13.35□□□□□ -0.27
NEDD4L-208ENST00000456173 GPCPD1Q9NPB8 672 aa13.35□□□□□ -0.27
NEDD4L-208ENST00000456173 GPHNQ9NQX3 736 aaPredicted RBP13.35□□□□□ -0.27
NEDD4L-208ENST00000456173 PNMA2Q9UL42 364 aa13.35□□□□□ -0.27
NEDD4L-208ENST00000456173 DNM3Q9UQ16 869 aa13.35□□□□□ -0.27
NEDD4L-208ENST00000456173 ABCC2Q92887 1545 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 DAPK3O43293 454 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 TTC4O95801 387 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 SERPING1P05155 500 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 MED21Q13503 144 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 PPP2R5BQ15173 497 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 CYTH1Q15438 398 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 GPBP1Q86WP2 473 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 THAP11Q96EK4 314 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 SH2D4AQ9H788 454 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 USP15Q9Y4E8 981 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 MAD1L1Q9Y6D9 718 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 TRIM49BA6NDI0 452 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 KRT75O95678 551 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 RESP18Q5W5W9 173 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 ANO5Q75V66 913 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 REXO1L1PQ8IX06 675 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 PROCA1Q8NCQ7 364 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 ZKSCAN4Q969J2 545 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 MS4A14Q96JA4 679 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 CHP1Q99653 195 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 DDX28Q9NUL7 540 aaKnown RBP13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 PANK4Q9NVE7 773 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 FOXN1O15353 648 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 SESTD1Q86VW0 696 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 BLIDQ8IZY5 108 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 DDX17Q92841 729 aaKnown RBP13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 NDST4Q9H3R1 872 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 MRPL12P52815 198 aaKnown RBP13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 FAM26FQ5R3K3 315 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 JADE1Q6IE81 842 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 KRT26Q7Z3Y9 468 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 ARL8AQ96BM9 186 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 SDCCAG3Q96C92 435 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 NRBF2Q96F24 287 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 EFHD1Q9BUP0 239 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 THAP9Q9H5L6 903 aa13.34□□□□□ -0.27
NEDD4L-208ENST00000456173 NOP56O00567 594 aaKnown RBP13.33□□□□□ -0.27
NEDD4L-208ENST00000456173 LONP1P36776 959 aaKnown RBP13.33□□□□□ -0.27
NEDD4L-208ENST00000456173 TSPY1Q01534 308 aa13.33□□□□□ -0.27
NEDD4L-208ENST00000456173 RABGAP1LQ5R372 815 aa13.33□□□□□ -0.27
NEDD4L-208ENST00000456173 APOA5Q6Q788 366 aa13.33□□□□□ -0.27
NEDD4L-208ENST00000456173 ARL10Q8N8L6 244 aa13.33□□□□□ -0.27
NEDD4L-208ENST00000456173 JDP2Q8WYK2 163 aa13.33□□□□□ -0.27
NEDD4L-208ENST00000456173 GFM2Q969S9 779 aaKnown RBP13.33□□□□□ -0.27
NEDD4L-208ENST00000456173 CCDC124Q96CT7 223 aaKnown RBP13.33□□□□□ -0.27
NEDD4L-208ENST00000456173 FOXP1Q9H334 677 aaPredicted RBP13.33□□□□□ -0.27
NEDD4L-208ENST00000456173 ZCCHC18P0CG32 403 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 SAT1P21673 171 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 PMS1P54277 932 aaKnown RBP13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 SLF2Q8IX21 1173 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 ALKBH5Q6P6C2 394 aaKnown RBP13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 TRIM42Q8IWZ5 723 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 TC2NQ8N9U0 490 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 NFATC2IPQ8NCF5 419 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 SNX12Q9UMY4 172 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 ZFYVE9O95405 1425 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 SGK1O00141 431 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 PDE5AO76074 875 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 GFPT2O94808 682 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 LMNB1P20700 586 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 PGM1P36871 562 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 SUPT20HQ8NEM7 779 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 MDM1Q8TC05 714 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 CCDC87Q9NVE4 849 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 ZNF652Q9Y2D9 606 aa13.33□□□□□ -0.28
NEDD4L-208ENST00000456173 GPC4O75487 556 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 KITP10721 976 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 CARSP49589 748 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 MRPS15P82914 257 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 GPKOWQ92917 476 aaPredicted RBP eCLIP13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 MPHOSPH6Q99547 160 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 RMI1Q9H9A7 625 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 CYP4F11Q9HBI6 524 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 L3MBTL1Q9Y468 752 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 SRPRBQ9Y5M8 271 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 LGALS16A8MUM7 142 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 SEMA3EO15041 775 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 INPP1P49441 399 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 MDM2Q00987 491 aaPredicted RBP13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 ERP27Q96DN0 273 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 NAF1Q96HR8 494 aaKnown RBP13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 PLEKHF1Q96S99 279 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 HAUS7Q99871 368 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 SIKE1Q9BRV8 207 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 AMACRQ9UHK6 382 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 PZPP20742 1482 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 ZNF189O75820 626 aaPredicted RBP13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 CCNE1P24864 410 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 NEK2P51955 445 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 ARFIP2P53365 341 aa13.32□□□□□ -0.28
NEDD4L-208ENST00000456173 PDE1BQ01064 536 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms