RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 SNX17Q15036 470 aa16.72■□□□□ 0.27
CLCN1-203ENST00000455478 INF2Q27J81 1249 aa16.72■□□□□ 0.27
CLCN1-203ENST00000455478 BRDTQ58F21 947 aaPredicted RBP16.72■□□□□ 0.27
CLCN1-203ENST00000455478 C1orf53Q5VUE5 145 aa16.72■□□□□ 0.27
CLCN1-203ENST00000455478 METTL7BQ6UX53 244 aa16.72■□□□□ 0.27
CLCN1-203ENST00000455478 PIK3AP1Q6ZUJ8 805 aa16.72■□□□□ 0.27
CLCN1-203ENST00000455478 PLA2G4DQ86XP0 818 aa16.72■□□□□ 0.27
CLCN1-203ENST00000455478 GIMAP8Q8ND71 665 aaPredicted RBP16.72■□□□□ 0.27
CLCN1-203ENST00000455478 LENG9Q96B70 501 aa16.72■□□□□ 0.27
CLCN1-203ENST00000455478 GLT1D1Q96MS3 346 aa16.72■□□□□ 0.27
CLCN1-203ENST00000455478 BRMS1Q9HCU9 246 aa16.72■□□□□ 0.27
CLCN1-203ENST00000455478 STARD7Q9NQZ5 370 aa16.72■□□□□ 0.27
CLCN1-203ENST00000455478 PKD2L1Q9P0L9 805 aa16.72■□□□□ 0.27
CLCN1-203ENST00000455478 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.72■□□□□ 0.27
CLCN1-203ENST00000455478 GRIN2DO15399 1336 aa16.71■□□□□ 0.27
CLCN1-203ENST00000455478 K7ELQ4 463 aaPredicted RBP16.71■□□□□ 0.27
CLCN1-203ENST00000455478 PPFIA4O75335 1185 aa16.71■□□□□ 0.27
CLCN1-203ENST00000455478 CDK7P50613 346 aa16.71■□□□□ 0.27
CLCN1-203ENST00000455478 ITGB3BPQ13352 177 aaPredicted RBP16.71■□□□□ 0.27
CLCN1-203ENST00000455478 DGKDQ16760 1214 aa16.71■□□□□ 0.27
CLCN1-203ENST00000455478 PRR16Q569H4 304 aa16.71■□□□□ 0.27
CLCN1-203ENST00000455478 DPF3Q92784 378 aa16.71■□□□□ 0.27
CLCN1-203ENST00000455478 VTI1AQ96AJ9 217 aa16.71■□□□□ 0.27
CLCN1-203ENST00000455478 MBOAT7Q96N66 472 aa16.71■□□□□ 0.27
CLCN1-203ENST00000455478 GPR20Q99678 358 aa16.71■□□□□ 0.27
CLCN1-203ENST00000455478 SMC3Q9UQE7 1217 aa16.71■□□□□ 0.27
CLCN1-203ENST00000455478 NFASCO94856 1347 aa16.7■□□□□ 0.26
CLCN1-203ENST00000455478 SCN10AQ9Y5Y9 1956 aa16.7■□□□□ 0.26
CLCN1-203ENST00000455478 DHX15O43143 795 aaKnown RBP16.7■□□□□ 0.26
CLCN1-203ENST00000455478 TDP2O95551 362 aa16.7■□□□□ 0.26
CLCN1-203ENST00000455478 RTP1P59025 263 aa16.7■□□□□ 0.26
CLCN1-203ENST00000455478 PSMC6P62333 389 aa16.7■□□□□ 0.26
CLCN1-203ENST00000455478 MOXD1Q6UVY6 613 aa16.7■□□□□ 0.26
CLCN1-203ENST00000455478 SLC43A3Q8NBI5 491 aa16.7■□□□□ 0.26
CLCN1-203ENST00000455478 KAT2BQ92831 832 aa16.7■□□□□ 0.26
CLCN1-203ENST00000455478 UIMC1Q96RL1 719 aa16.7■□□□□ 0.26
CLCN1-203ENST00000455478 MTG1Q9BT17 334 aaPredicted RBP16.7■□□□□ 0.26
CLCN1-203ENST00000455478 A0A0U1RQG5 324 aaPredicted RBP16.69■□□□□ 0.26
CLCN1-203ENST00000455478 GSTTP1A0A1W2PQM5 241 aa16.69■□□□□ 0.26
CLCN1-203ENST00000455478 ARVCFO00192 962 aa16.69■□□□□ 0.26
CLCN1-203ENST00000455478 IPO5O00410 1097 aaKnown RBP16.69■□□□□ 0.26
CLCN1-203ENST00000455478 EVI5O60447 810 aa16.69■□□□□ 0.26
CLCN1-203ENST00000455478 SETQ01105 290 aaPredicted RBP16.69■□□□□ 0.26
CLCN1-203ENST00000455478 ITGA7Q13683 1181 aa16.69■□□□□ 0.26
CLCN1-203ENST00000455478 SAFBQ15424 915 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLCN1-203ENST00000455478 LETM2Q2VYF4 491 aa16.69■□□□□ 0.26
CLCN1-203ENST00000455478 TRIM60Q495X7 471 aa16.69■□□□□ 0.26
CLCN1-203ENST00000455478 Q4G0T1 1027 aa16.69■□□□□ 0.26
CLCN1-203ENST00000455478 NEK8Q86SG6 692 aa16.69■□□□□ 0.26
CLCN1-203ENST00000455478 KIF3AQ9Y496 699 aa16.69■□□□□ 0.26
CLCN1-203ENST00000455478 NOP56O00567 594 aaKnown RBP16.68■□□□□ 0.26
CLCN1-203ENST00000455478 MSH4O15457 936 aa16.68■□□□□ 0.26
CLCN1-203ENST00000455478 SP4Q02446 784 aa16.68■□□□□ 0.26
CLCN1-203ENST00000455478 TLE2Q04725 743 aa16.68■□□□□ 0.26
CLCN1-203ENST00000455478 NBPF20Q3BBV1 942 aa16.68■□□□□ 0.26
CLCN1-203ENST00000455478 PPP4R3AQ6IN85 833 aa16.68■□□□□ 0.26
CLCN1-203ENST00000455478 INTS4Q96HW7 963 aaKnown RBP16.68■□□□□ 0.26
CLCN1-203ENST00000455478 SDF4Q9BRK5 362 aa16.68■□□□□ 0.26
CLCN1-203ENST00000455478 ZNF577Q9BSK1 485 aa16.68■□□□□ 0.26
CLCN1-203ENST00000455478 C16orf70Q9BSU1 422 aa16.68■□□□□ 0.26
CLCN1-203ENST00000455478 FOXP1Q9H334 677 aaPredicted RBP16.68■□□□□ 0.26
CLCN1-203ENST00000455478 JPH1Q9HDC5 661 aaPredicted RBP16.68■□□□□ 0.26
CLCN1-203ENST00000455478 SLC9A2Q9UBY0 812 aa16.68■□□□□ 0.26
CLCN1-203ENST00000455478 ATP11BQ9Y2G3 1177 aa16.68■□□□□ 0.26
CLCN1-203ENST00000455478 KIF28PB7ZC32 967 aa16.67■□□□□ 0.26
CLCN1-203ENST00000455478 ZNF286BP0CG31 522 aa16.67■□□□□ 0.26
CLCN1-203ENST00000455478 U2AF2P26368 475 aaKnown RBP eCLIP16.67■□□□□ 0.26
CLCN1-203ENST00000455478 ANKRD33Q7Z3H0 272 aa16.67■□□□□ 0.26
CLCN1-203ENST00000455478 C7orf61Q8IZ16 206 aa16.67■□□□□ 0.26
CLCN1-203ENST00000455478 PPP1R13LQ8WUF5 828 aa16.67■□□□□ 0.26
CLCN1-203ENST00000455478 SEPT1Q8WYJ6 367 aa16.67■□□□□ 0.26
CLCN1-203ENST00000455478 HAS3O00219 553 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 WNT7AO00755 349 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 SLC37A4O43826 429 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 CCNE2O96020 404 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 F2P00734 622 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 LGALS2P05162 132 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 GCFC2P16383 781 aaKnown RBP16.66■□□□□ 0.26
CLCN1-203ENST00000455478 PSEN2P49810 448 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 ACTR2P61160 394 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
CLCN1-203ENST00000455478 HSCBQ8IWL3 235 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 ETNPPLQ8TBG4 499 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 SLC5A5Q92911 643 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 GJA10Q969M2 543 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 TOX2Q96NM4 488 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 SEZ6LQ9BYH1 1024 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 TBC1D22BQ9NU19 505 aa16.66■□□□□ 0.26
CLCN1-203ENST00000455478 DDX25Q9UHL0 483 aaKnown RBP16.66■□□□□ 0.26
CLCN1-203ENST00000455478 DDX39AO00148 427 aaKnown RBP16.65■□□□□ 0.26
CLCN1-203ENST00000455478 CCNT1O60563 726 aaKnown RBP16.65■□□□□ 0.26
CLCN1-203ENST00000455478 PQBP1O60828 265 aaKnown RBP16.65■□□□□ 0.26
CLCN1-203ENST00000455478 ATG7O95352 703 aa16.65■□□□□ 0.26
CLCN1-203ENST00000455478 TCF7P36402 384 aaPredicted RBP16.65■□□□□ 0.26
CLCN1-203ENST00000455478 MFSD10Q14728 455 aa16.65■□□□□ 0.26
CLCN1-203ENST00000455478 UTP14CQ5TAP6 766 aaKnown RBP16.65■□□□□ 0.26
CLCN1-203ENST00000455478 NFRKBQ6P4R8 1299 aa16.65■□□□□ 0.26
CLCN1-203ENST00000455478 NOSTRINQ8IVI9 506 aa16.65■□□□□ 0.26
CLCN1-203ENST00000455478 FAM126BQ8IXS8 530 aa16.65■□□□□ 0.26
CLCN1-203ENST00000455478 PCYT2Q99447 389 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms