RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 STRIP1Q5VSL9 837 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 TTBK2Q6IQ55 1244 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 ZSWIM9Q86XI8 627 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 APOBEC3FQ8IUX4 373 aaKnown RBP4.79□□□□□ -1.64
RBM39-220ENST00000455343 ZBTB38Q8NAP3 1195 aaPredicted RBP4.79□□□□□ -1.64
RBM39-220ENST00000455343 ZNF428Q96B54 188 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 WNK4Q96J92 1243 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 CLMNQ96JQ2 1002 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 MIPEPQ99797 713 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 MXD3Q9BW11 206 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 WNT10AQ9GZT5 417 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 DEFB129Q9H1M3 183 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 FZD1Q9UP38 647 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 CTNND2Q9UQB3 1225 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 PTCH2Q9Y6C5 1203 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 SNCAIPQ9Y6H5 919 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 TRIOBPQ9H2D6 2365 aa4.79□□□□□ -1.64
RBM39-220ENST00000455343 KIAA0100Q14667 2235 aaKnown RBP4.78□□□□□ -1.64
RBM39-220ENST00000455343 LAMB4A4D0S4 1761 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 XDHP47989 1333 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 A0A1W2PPC1 479 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 PRR33A8MZF0 331 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 CHL1O00533 1208 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 USP2O75604 605 aaPredicted RBP4.78□□□□□ -1.64
RBM39-220ENST00000455343 SASH1O94885 1247 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 EIF4BP23588 611 aaKnown RBP4.78□□□□□ -1.64
RBM39-220ENST00000455343 CDK8P49336 464 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 PRKG1Q13976 671 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 CNGB1Q14028 1251 aaPredicted RBP4.78□□□□□ -1.64
RBM39-220ENST00000455343 ZNF124Q15973 351 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 NKG7Q16617 165 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 SLC9C1Q4G0N8 1177 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 OTUD7BQ6GQQ9 843 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 MFSD4AQ8N468 514 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 MFSD2AQ8NA29 543 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 SHISA4Q96DD7 197 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 COA1Q9GZY4 146 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 SEMA3GQ9NS98 782 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 LMCD1Q9NZU5 365 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 CHPF2Q9P2E5 772 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 TPX2Q9ULW0 747 aaKnown RBP4.78□□□□□ -1.64
RBM39-220ENST00000455343 SPTBN5Q9NRC6 3674 aaKnown RBP4.78□□□□□ -1.64
RBM39-220ENST00000455343 ANKRD36CQ5JPF3 1778 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 SSC5DA1L4H1 1573 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 MED23Q9ULK4 1368 aa4.78□□□□□ -1.64
RBM39-220ENST00000455343 COL1A1P02452 1464 aaPredicted RBP4.77□□□□□ -1.65
RBM39-220ENST00000455343 SCN9AQ15858 1988 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 PDE8AO60658 829 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 PRPF40AO75400 957 aaKnown RBP4.77□□□□□ -1.65
RBM39-220ENST00000455343 PCCAP05165 728 aaPredicted RBP4.77□□□□□ -1.65
RBM39-220ENST00000455343 HOXB7P09629 217 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 HSP90B1P14625 803 aaKnown RBP4.77□□□□□ -1.65
RBM39-220ENST00000455343 ETF1P62495 437 aaKnown RBP4.77□□□□□ -1.65
RBM39-220ENST00000455343 RPS26P62854 115 aaKnown RBP4.77□□□□□ -1.65
RBM39-220ENST00000455343 FGD1P98174 961 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 TRIM26Q12899 539 aaPredicted RBP4.77□□□□□ -1.65
RBM39-220ENST00000455343 ARHGEF6Q15052 776 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 KCNMB1Q16558 191 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 KRT24Q2M2I5 525 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 SLC4A8Q2Y0W8 1093 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 SUPT20HL1Q3ZLR7 823 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 CCDC152Q4G0S7 254 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 SFRP5Q5T4F7 317 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 TTLL5Q6EMB2 1281 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 HID1Q8IV36 788 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 ANKRD13AQ8IZ07 590 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 BRI3BPQ8WY22 251 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 HSPA12BQ96MM6 686 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 CARS2Q9HA77 564 aaKnown RBP4.77□□□□□ -1.65
RBM39-220ENST00000455343 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.77□□□□□ -1.65
RBM39-220ENST00000455343 DBF4Q9UBU7 674 aaPredicted RBP4.77□□□□□ -1.65
RBM39-220ENST00000455343 MINPP1Q9UNW1 487 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 PPP2R3BQ9Y5P8 575 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 CAPN6Q9Y6Q1 641 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 KDM3BQ7LBC6 1761 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 AKAP11Q9UKA4 1901 aa4.77□□□□□ -1.65
RBM39-220ENST00000455343 ZNF804BA4D1E1 1349 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 ZNF503-AS2A6NEH8 195 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.76□□□□□ -1.65
RBM39-220ENST00000455343 H3BS24 57 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 CEP290O15078 2479 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 TLR2O60603 784 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 CST3P01034 146 aaPredicted RBP4.76□□□□□ -1.65
RBM39-220ENST00000455343 GJA8P48165 433 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 CCT4P50991 539 aaKnown RBP4.76□□□□□ -1.65
RBM39-220ENST00000455343 PRMT2P55345 433 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 RIPK4P57078 832 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 MESP2Q0VG99 397 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 SEPT6Q14141 434 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 CCDC85BQ15834 202 aaPredicted RBP4.76□□□□□ -1.65
RBM39-220ENST00000455343 NBPF12Q5TAG4 269 aaPredicted RBP4.76□□□□□ -1.65
RBM39-220ENST00000455343 CDKAL1Q5VV42 579 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 PRAMEF13Q5VWM6 474 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 LETMD1Q6P1Q0 360 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 KIAA0825Q8IV33 1275 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 ANKRD18AQ8IVF6 992 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 FAM43AQ8N2R8 423 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 CERS5Q8N5B7 392 aa4.76□□□□□ -1.65
RBM39-220ENST00000455343 CCDC191Q8NCU4 936 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms