RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 CPVLQ9H3G5 476 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 VAT1LQ9HCJ6 419 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 PCDHA1Q9Y5I3 950 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 MUC3AQ02505 3323 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 TRANK1O15050 2925 aa9.31□□□□□ -0.92
NIF3L1-209ENST00000454952 ERICH2A1L162 156 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 RSPH10B2B2RC85 870 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 KLRF2D3W0D1 207 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 GCOM1H8Y6P7 765 aaPredicted RBP9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 NOP56O00567 594 aaKnown RBP9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 LPXNO60711 386 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 GGPS1O95749 300 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 RSPH10BP0C881 870 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 POLR2MP0CAP2 368 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 MYCLP12524 364 aaPredicted RBP9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 THPOP40225 353 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 DEFB103AP81534 67 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 NUCB1Q02818 461 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 TMEM31Q5JXX7 168 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 ZNF618Q5T7W0 954 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 MYSM1Q5VVJ2 828 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 SERINC5Q86VE9 423 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 VSIG10LQ86VR7 867 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 PLEKHM2Q8IWE5 1019 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 GDPD5Q8WTR4 605 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 MTMR8Q96EF0 704 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 MLXIPQ9HAP2 919 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 FAM50BQ9Y247 325 aa9.3□□□□□ -0.92
NIF3L1-209ENST00000454952 C17orf102A2RUQ5 167 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 LCHNA4D1U4 455 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 LINC01553A4QN01 128 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 ARHGEF15O94989 841 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 C7P10643 843 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 NEDD9Q14511 834 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 GPNMBQ14956 572 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 SART3Q15020 963 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 PGM5Q15124 567 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 TRIM71Q2Q1W2 868 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 TIGD5Q53EQ6 642 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 KRT40Q6A162 431 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 B4GALNT3Q6L9W6 998 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 RUFY2Q8WXA3 655 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 SLC39A7Q92504 469 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 SEPT8Q92599 483 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 APBB2Q92870 758 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 ATP6V0A1Q93050 837 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 USP26Q9BXU7 913 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 UBE2ZQ9H832 354 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 SUGCTQ9HAC7 445 aa9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 ZNF215Q9UL58 517 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 BAZ2BQ9UIF8 2168 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-209ENST00000454952 RALGAPA2Q2PPJ7 1873 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 PNMA6FA0A0J9YX94 578 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 H3BRB1 525 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 OPLAHO14841 1288 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 NCK2O43639 380 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 GPR37L1O60883 481 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 UBA1P22314 1058 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 HTRA4P83105 476 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 SEC23AQ15436 765 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 E2F4Q16254 413 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 HSDL1Q3SXM5 330 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 LEXMQ3ZCV2 418 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 PLEKHG4Q58EX7 1191 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 XRRA1Q6P2D8 792 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 TRAF7Q6Q0C0 670 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 METTL7BQ6UX53 244 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 MYOCDQ8IZQ8 938 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 GIMAP8Q8ND71 665 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 MRPL38Q96DV4 380 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 YME1L1Q96TA2 773 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 C16orf70Q9BSU1 422 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 TUT1Q9H6E5 874 aaKnown RBP9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 MAD2L2Q9UI95 211 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 MTUS1Q9ULD2 1270 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 COL4A6Q14031 1691 aa9.28□□□□□ -0.92
NIF3L1-209ENST00000454952 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 FIBPO43427 364 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 RGS20O76081 388 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 LGALS2P05162 132 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 RPLP2P05387 115 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 SMIM10L2AP0DMW4 78 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 SMIM10L2BP0DMW5 78 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 ALADP13716 330 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 PDE4AP27815 886 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 HOXA13P31271 388 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 HOXC8P31273 242 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 ICAM3P32942 547 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 GRM4Q14833 912 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 FAM117BQ6P1L5 589 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 TMCO2Q7Z6W1 182 aaPredicted RBP9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 CATIPQ7Z7H3 387 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 RALYLQ86SE5 291 aaKnown RBP9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 FCHSD1Q86WN1 690 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 HOMER1Q86YM7 354 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 STAG2Q8N3U4 1231 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 DBF4BQ8NFT6 615 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 CUL5Q93034 780 aa9.27□□□□□ -0.93
NIF3L1-209ENST00000454952 LRFN3Q9BTN0 628 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms