RNA–Protein interactions for RNA: ENST00000453643.5

PACSIN2-210, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 5

Gene PACSIN2, Length 818 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-210ENST00000453643 TMTC3Q6ZXV5 915 aa18.4■□□□□ 0.54
PACSIN2-210ENST00000453643 SPRED2Q7Z698 418 aa18.4■□□□□ 0.54
PACSIN2-210ENST00000453643 RASEFQ8IZ41 740 aa18.4■□□□□ 0.54
PACSIN2-210ENST00000453643 TMTC2Q8N394 836 aa18.4■□□□□ 0.54
PACSIN2-210ENST00000453643 CUL5Q93034 780 aa18.4■□□□□ 0.54
PACSIN2-210ENST00000453643 CERS4Q9HA82 394 aa18.4■□□□□ 0.54
PACSIN2-210ENST00000453643 EPOPA6NHQ4 379 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 H3BRB1 525 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 NOP56O00567 594 aaKnown RBP18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 STAM2O75886 525 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 BAIAP3O94812 1187 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 CXCL10P02778 98 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 SP4Q02446 784 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 ADCK5Q3MIX3 580 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 METTL7BQ6UX53 244 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 SGMS1Q86VZ5 419 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 FANCBQ8NB91 859 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 GPR20Q99678 358 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 TUT1Q9H6E5 874 aaKnown RBP18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 DOCK5Q9H7D0 1870 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 PTPRSQ13332 1948 aa18.39■□□□□ 0.53
PACSIN2-210ENST00000453643 LCHNA4D1U4 455 aa18.38■□□□□ 0.53
PACSIN2-210ENST00000453643 SMIM10L2AP0DMW4 78 aa18.38■□□□□ 0.53
PACSIN2-210ENST00000453643 SMIM10L2BP0DMW5 78 aa18.38■□□□□ 0.53
PACSIN2-210ENST00000453643 CALM1P0DP23 149 aa18.38■□□□□ 0.53
PACSIN2-210ENST00000453643 CALM2P0DP24 149 aa18.38■□□□□ 0.53
PACSIN2-210ENST00000453643 CALM3P0DP25 149 aa18.38■□□□□ 0.53
PACSIN2-210ENST00000453643 HOXC8P31273 242 aa18.38■□□□□ 0.53
PACSIN2-210ENST00000453643 APOA5Q6Q788 366 aa18.38■□□□□ 0.53
PACSIN2-210ENST00000453643 SERINC5Q86VE9 423 aa18.38■□□□□ 0.53
PACSIN2-210ENST00000453643 PHOSPHO2Q8TCD6 241 aa18.38■□□□□ 0.53
PACSIN2-210ENST00000453643 PSTPIP2Q9H939 334 aa18.38■□□□□ 0.53
PACSIN2-210ENST00000453643 CNTNAP5Q8WYK1 1306 aa18.38■□□□□ 0.53
PACSIN2-210ENST00000453643 C17orf102A2RUQ5 167 aa18.37■□□□□ 0.53
PACSIN2-210ENST00000453643 KCNJ6P48051 423 aa18.37■□□□□ 0.53
PACSIN2-210ENST00000453643 TAP1Q03518 808 aa18.37■□□□□ 0.53
PACSIN2-210ENST00000453643 NEDD9Q14511 834 aa18.37■□□□□ 0.53
PACSIN2-210ENST00000453643 UTP14CQ5TAP6 766 aaKnown RBP18.37■□□□□ 0.53
PACSIN2-210ENST00000453643 CNKSR3Q6P9H4 555 aa18.37■□□□□ 0.53
PACSIN2-210ENST00000453643 HEATR3Q7Z4Q2 680 aa18.37■□□□□ 0.53
PACSIN2-210ENST00000453643 MICALL1Q8N3F8 863 aa18.37■□□□□ 0.53
PACSIN2-210ENST00000453643 NEK1Q96PY6 1258 aa18.37■□□□□ 0.53
PACSIN2-210ENST00000453643 OSBPL7Q9BZF2 842 aa18.37■□□□□ 0.53
PACSIN2-210ENST00000453643 BRPF3Q9ULD4 1205 aa18.37■□□□□ 0.53
PACSIN2-210ENST00000453643 TREHO43280 583 aa18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 ATP9AO75110 1047 aa18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 ITGB5P18084 799 aa18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 THPOP40225 353 aa18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 EXOSC10Q01780 885 aaKnown RBP18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 RNF20Q5VTR2 975 aa18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 KRT40Q6A162 431 aa18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 WWC2Q6AWC2 1192 aa18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 TYW1BQ6NUM6 668 aa18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 ATP6V0A1Q93050 837 aa18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 USP26Q9BXU7 913 aa18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 RNPEPQ9H4A4 650 aa18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 PKD2L1Q9P0L9 805 aa18.36■□□□□ 0.53
PACSIN2-210ENST00000453643 TLL1O43897 1013 aa18.35■□□□□ 0.53
PACSIN2-210ENST00000453643 CDC45O75419 566 aa18.35■□□□□ 0.53
PACSIN2-210ENST00000453643 PARNO95453 639 aaKnown RBP18.35■□□□□ 0.53
PACSIN2-210ENST00000453643 KCNA2P16389 499 aa18.35■□□□□ 0.53
PACSIN2-210ENST00000453643 FUT2Q10981 343 aa18.35■□□□□ 0.53
PACSIN2-210ENST00000453643 XRRA1Q6P2D8 792 aa18.35■□□□□ 0.53
PACSIN2-210ENST00000453643 ARNTL2Q8WYA1 636 aa18.35■□□□□ 0.53
PACSIN2-210ENST00000453643 SENP7Q9BQF6 1050 aa18.35■□□□□ 0.53
PACSIN2-210ENST00000453643 SETD4Q9NVD3 440 aa18.35■□□□□ 0.53
PACSIN2-210ENST00000453643 PRRC2BQ5JSZ5 2229 aaKnown RBP18.34■□□□□ 0.53
PACSIN2-210ENST00000453643 KIF28PB7ZC32 967 aa18.34■□□□□ 0.53
PACSIN2-210ENST00000453643 CTSHP09668 335 aa18.34■□□□□ 0.53
PACSIN2-210ENST00000453643 DHX32Q7L7V1 743 aaKnown RBP18.34■□□□□ 0.53
PACSIN2-210ENST00000453643 NLRX1Q86UT6 975 aa18.34■□□□□ 0.53
PACSIN2-210ENST00000453643 PGBD1Q96JS3 809 aa18.34■□□□□ 0.53
PACSIN2-210ENST00000453643 THEGQ9P2T0 379 aa18.34■□□□□ 0.53
PACSIN2-210ENST00000453643 PCDHA6Q9UN73 950 aa18.34■□□□□ 0.53
PACSIN2-210ENST00000453643 PCDHA8Q9Y5H6 950 aa18.34■□□□□ 0.53
PACSIN2-210ENST00000453643 UBIAD1Q9Y5Z9 338 aa18.34■□□□□ 0.53
PACSIN2-210ENST00000453643 ABHD14A-ACY1A0A1B0GW23 586 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 SPDYE3A6NKU9 549 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 RSPH10B2B2RC85 870 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 LGR5O75473 907 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 RSPH10BP0C881 870 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 CPA1P15085 419 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 TCF7P36402 384 aaPredicted RBP18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 MKRN4PQ13434 485 aaPredicted RBP18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 RTN1Q16799 776 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 TJAP1Q5JTD0 557 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 FAM117BQ6P1L5 589 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 SYNE3Q6ZMZ3 975 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 DBF4BQ8NFT6 615 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 LMBR1Q8WVP7 490 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 GPRASP2Q96D09 838 aa18.33■□□□□ 0.52
PACSIN2-210ENST00000453643 KLF18A0A0U1RQI7 1052 aa18.32■□□□□ 0.52
PACSIN2-210ENST00000453643 ZBTB43O43298 467 aa18.32■□□□□ 0.52
PACSIN2-210ENST00000453643 GJB5O95377 273 aa18.32■□□□□ 0.52
PACSIN2-210ENST00000453643 CDC27P30260 824 aa18.32■□□□□ 0.52
PACSIN2-210ENST00000453643 MTMR1Q13613 665 aa18.32■□□□□ 0.52
PACSIN2-210ENST00000453643 IKBKEQ14164 716 aa18.32■□□□□ 0.52
PACSIN2-210ENST00000453643 TSGA10IPQ3SY00 556 aa18.32■□□□□ 0.52
PACSIN2-210ENST00000453643 ZBED2Q9BTP6 218 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms