RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 CEP55Q53EZ4 464 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 CYP4F22Q6NT55 531 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 SHC4Q6S5L8 630 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 REM2Q8IYK8 340 aaPredicted RBP17.76■□□□□ 0.43
SNX17-204ENST00000453453 DNERQ8NFT8 737 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 AK8Q96MA6 479 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 MPHOSPH6Q99547 160 aaKnown RBP17.76■□□□□ 0.43
SNX17-204ENST00000453453 ZFYVE28Q9HCC9 887 aa17.76■□□□□ 0.43
SNX17-204ENST00000453453 PLXNB2O15031 1838 aa17.75■□□□□ 0.43
SNX17-204ENST00000453453 A0A1B0GVL5 298 aa17.75■□□□□ 0.43
SNX17-204ENST00000453453 TPM1P09493 284 aa17.75■□□□□ 0.43
SNX17-204ENST00000453453 PFKFB1P16118 471 aa17.75■□□□□ 0.43
SNX17-204ENST00000453453 TXKP42681 527 aa17.75■□□□□ 0.43
SNX17-204ENST00000453453 TM4SF4P48230 202 aa17.75■□□□□ 0.43
SNX17-204ENST00000453453 FBXO38Q6PIJ6 1188 aa17.75■□□□□ 0.43
SNX17-204ENST00000453453 MTMR9Q96QG7 549 aa17.75■□□□□ 0.43
SNX17-204ENST00000453453 PDCD2LQ9BRP1 358 aa17.75■□□□□ 0.43
SNX17-204ENST00000453453 GOLPH3LQ9H4A5 285 aa17.75■□□□□ 0.43
SNX17-204ENST00000453453 IVNS1ABPQ9Y6Y0 642 aa17.75■□□□□ 0.43
SNX17-204ENST00000453453 LCTP09848 1927 aa17.75■□□□□ 0.43
SNX17-204ENST00000453453 PHLPP2Q6ZVD8 1323 aa17.74■□□□□ 0.43
SNX17-204ENST00000453453 ZNFX1Q9P2E3 1918 aaKnown RBP17.74■□□□□ 0.43
SNX17-204ENST00000453453 FAM86B1E9PN63 330 aa17.74■□□□□ 0.43
SNX17-204ENST00000453453 FAM86B2P0C5J1 330 aa17.74■□□□□ 0.43
SNX17-204ENST00000453453 MYCLP12524 364 aaPredicted RBP17.74■□□□□ 0.43
SNX17-204ENST00000453453 GRIN1Q05586 938 aa17.74■□□□□ 0.43
SNX17-204ENST00000453453 NIPA1Q7RTP0 329 aa17.74■□□□□ 0.43
SNX17-204ENST00000453453 FILIP1Q7Z7B0 1213 aa17.74■□□□□ 0.43
SNX17-204ENST00000453453 ZNF592Q92610 1267 aa17.74■□□□□ 0.43
SNX17-204ENST00000453453 FAM20AQ96MK3 541 aa17.74■□□□□ 0.43
SNX17-204ENST00000453453 MXRA8Q9BRK3 442 aa17.74■□□□□ 0.43
SNX17-204ENST00000453453 PYM1Q9BRP8 204 aaKnown RBP17.74■□□□□ 0.43
SNX17-204ENST00000453453 KCNMB3Q9NPA1 279 aa17.74■□□□□ 0.43
SNX17-204ENST00000453453 FAM237AA0A1B0GTK4 181 aa17.73■□□□□ 0.43
SNX17-204ENST00000453453 USP27XA6NNY8 438 aa17.73■□□□□ 0.43
SNX17-204ENST00000453453 ALDH1A1P00352 501 aa17.73■□□□□ 0.43
SNX17-204ENST00000453453 SYKP43405 635 aa17.73■□□□□ 0.43
SNX17-204ENST00000453453 FXR2P51116 673 aaKnown RBP eCLIP17.73■□□□□ 0.43
SNX17-204ENST00000453453 NDUFA8P51970 172 aa17.73■□□□□ 0.43
SNX17-204ENST00000453453 SPECC1Q5M775 1068 aa17.73■□□□□ 0.43
SNX17-204ENST00000453453 CAPNS2Q96L46 248 aa17.73■□□□□ 0.43
SNX17-204ENST00000453453 IWS1Q96ST2 819 aa17.73■□□□□ 0.43
SNX17-204ENST00000453453 KCNH3Q9ULD8 1083 aa17.73■□□□□ 0.43
SNX17-204ENST00000453453 ADGRA2Q96PE1 1338 aa17.73■□□□□ 0.43
SNX17-204ENST00000453453 IGLV3-22A0A075B6J6 115 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 STRNO43815 780 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 STAM2O75886 525 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 NR3C2P08235 984 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 MAPK4P31152 587 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 TECP42680 631 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 IL17AQ16552 155 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 IL31RAQ8NI17 732 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 SYMPKQ92797 1274 aaKnown RBP17.72■□□□□ 0.43
SNX17-204ENST00000453453 LENG9Q96B70 501 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 PORCNQ9H237 461 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 EFCC1Q9HA90 598 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 ARGLU1Q9NWB6 273 aaPredicted RBP17.72■□□□□ 0.43
SNX17-204ENST00000453453 PCDHA12Q9UN75 941 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 MEIS1O00470 390 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 BCRP11274 1271 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 UBA7P41226 1012 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 SLC20A2Q08357 652 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 PDIA5Q14554 519 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 ELF2Q15723 593 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 NLRX1Q86UT6 975 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 FMR1NBQ8N0W7 255 aaPredicted RBP17.72■□□□□ 0.43
SNX17-204ENST00000453453 ABRAQ8N0Z2 381 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 RASSF8Q8NHQ8 419 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 ETNPPLQ8TBG4 499 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 HAS1Q92839 578 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 CCDC34Q96HJ3 373 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 PURBQ96QR8 312 aaKnown RBP17.72■□□□□ 0.43
SNX17-204ENST00000453453 TSPYL1Q9H0U9 437 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 LRWD1Q9UFC0 647 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 CPA4Q9UI42 421 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 HPSEQ9Y251 543 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 UBIAD1Q9Y5Z9 338 aa17.72■□□□□ 0.43
SNX17-204ENST00000453453 MSH4O15457 936 aa17.71■□□□□ 0.43
SNX17-204ENST00000453453 TLR2O60603 784 aa17.71■□□□□ 0.43
SNX17-204ENST00000453453 ALDH5A1P51649 535 aaPredicted RBP17.71■□□□□ 0.43
SNX17-204ENST00000453453 CNTN2Q02246 1040 aa17.71■□□□□ 0.43
SNX17-204ENST00000453453 STXBP2Q15833 593 aa17.71■□□□□ 0.43
SNX17-204ENST00000453453 VSIG10LQ86VR7 867 aa17.71■□□□□ 0.43
SNX17-204ENST00000453453 AOPEPQ8N6M6 819 aa17.71■□□□□ 0.43
SNX17-204ENST00000453453 IGSF22Q8N9C0 903 aa17.71■□□□□ 0.43
SNX17-204ENST00000453453 FAM133AQ8N9E0 248 aa17.71■□□□□ 0.43
SNX17-204ENST00000453453 TIGD1Q96MW7 591 aa17.71■□□□□ 0.43
SNX17-204ENST00000453453 JADE2Q9NQC1 790 aa17.71■□□□□ 0.43
SNX17-204ENST00000453453 PLXNA1Q9UIW2 1896 aa17.7■□□□□ 0.42
SNX17-204ENST00000453453 IKBKBO14920 756 aa17.7■□□□□ 0.42
SNX17-204ENST00000453453 ZNF202O95125 648 aa17.7■□□□□ 0.42
SNX17-204ENST00000453453 SFPQP23246 707 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNX17-204ENST00000453453 MRPS9P82933 396 aaKnown RBP17.7■□□□□ 0.42
SNX17-204ENST00000453453 MTMR1Q13613 665 aa17.7■□□□□ 0.42
SNX17-204ENST00000453453 NAA30Q147X3 362 aaPredicted RBP17.7■□□□□ 0.42
SNX17-204ENST00000453453 GNPTABQ3T906 1256 aa17.7■□□□□ 0.42
SNX17-204ENST00000453453 CYP2W1Q8TAV3 490 aa17.7■□□□□ 0.42
SNX17-204ENST00000453453 EPSTI1Q96J88 318 aa17.7■□□□□ 0.42
SNX17-204ENST00000453453 CDHR1Q96JP9 859 aa17.7■□□□□ 0.42
SNX17-204ENST00000453453 PPP1R13BQ96KQ4 1090 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms