RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 CEP57L1Q8IYX8 460 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 KCTD17Q8N5Z5 321 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 PDILTQ8N807 584 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CNNM3Q8NE01 707 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 GJA10Q969M2 543 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CDK5RAP3Q96JB5 506 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 UIMC1Q96RL1 719 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 SENP7Q9BQF6 1050 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 NT5C3AQ9H0P0 336 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 TNMDQ9H2S6 317 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 CLSTN2Q9H4D0 955 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 TMEM63CQ9P1W3 806 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 VAV3Q9UKW4 847 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 NFASCO94856 1347 aa14.09□□□□□ -0.15
HLA-DPA1-244ENST00000453337 PP2D1A8MPX8 630 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 DHX15O43143 795 aaKnown RBP14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SLFN14P0C7P3 912 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 HSPA6P17066 643 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 MUTP22033 750 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 CCT6AP40227 531 aaKnown RBP14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 RGS2P41220 211 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 PSMC4P43686 418 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 LACTBP83111 547 aaPredicted RBP14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 KRT76Q01546 638 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SPIRE1Q08AE8 756 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 EPHA7Q15375 998 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 LONRF3Q496Y0 759 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 HAUS3Q68CZ6 603 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 NCAPH2Q6IBW4 605 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 KRBA2Q6ZNG9 492 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ARMCX2Q7L311 632 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SNX29Q8TEQ0 813 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 USP6NLQ92738 828 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 DHX58Q96C10 678 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 MAML3Q96JK9 1138 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 MMTAG2Q9BU76 263 aaKnown RBP14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 CUEDC2Q9H467 287 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 VTA1Q9NP79 307 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SERTAD1Q9UHV2 236 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 GJD2Q9UKL4 321 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 KDM3AQ9Y4C1 1321 aa14.08□□□□□ -0.16
HLA-DPA1-244ENST00000453337 WDR81Q562E7 1941 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ATP9AO75110 1047 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 KCNA2P16389 499 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 RPA1P27694 616 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 HOXD10P28358 340 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SFNP31947 248 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 STAT6P42226 847 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 C1QTNF8P60827 252 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SEMA3FQ13275 785 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ITGB3BPQ13352 177 aaPredicted RBP14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 NEDD9Q14511 834 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 KARSQ15046 597 aaKnown RBP14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ARHGEF6Q15052 776 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ZRSR1Q15695 479 aaKnown RBP14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 HYIQ5T013 277 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ZNF746Q6NUN9 644 aaPredicted RBP14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 B3GNT9Q6UX72 402 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 RDM1Q8NG50 284 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 NPLOC4Q8TAT6 608 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 TINF2Q9BSI4 451 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 POLR3CQ9BUI4 534 aaPredicted RBP14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 UNC45AQ9H3U1 944 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ABHD16BQ9H3Z7 469 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 DISC1Q9NRI5 854 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SAGE1Q9NXZ1 904 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 PKD2L1Q9P0L9 805 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 STK17AQ9UEE5 414 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SYNGAP1Q96PV0 1343 aa14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 MYH9P35579 1960 aaKnown RBP14.07□□□□□ -0.16
HLA-DPA1-244ENST00000453337 DOCK5Q9H7D0 1870 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 XRCC5P13010 732 aaKnown RBP14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 JAK3P52333 1124 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 AMPD3Q01432 767 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 MAP2K1Q02750 393 aaPredicted RBP14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 IRF5Q13568 498 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 TTLL4Q14679 1199 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 CAMK4Q16566 473 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 EEPD1Q7L9B9 569 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 MIER3Q7Z3K6 550 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 NEK9Q8TD19 979 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 SCFD2Q8WU76 684 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 EIF2AK1Q9BQI3 630 aaKnown RBP14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 BEGAINQ9BUH8 593 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 GZF1Q9H116 711 aaPredicted RBP14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 MAGEF1Q9HAY2 307 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 TUFT1Q9NNX1 390 aa14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.06□□□□□ -0.16
HLA-DPA1-244ENST00000453337 LRRC37A2A6NM11 1700 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 A0A087X0B3 334 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 WDR64B1ANS9 1081 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 DDX39AO00148 427 aaKnown RBP14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 EML1O00423 815 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ACTN4O43707 911 aaKnown RBP14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ECM2O94769 699 aaPredicted RBP14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 PLCG1P19174 1290 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 CYP2B6P20813 491 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 GRB10Q13322 594 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 E2F4Q16254 413 aa14.05□□□□□ -0.16
HLA-DPA1-244ENST00000453337 ZSCAN23Q3MJ62 389 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms