RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 WNT8BQ93098 351 aa16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 DSCC1Q9BVC3 393 aa16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 NSUN3Q9H649 340 aaKnown RBP16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 TUT1Q9H6E5 874 aaKnown RBP16.6■□□□□ 0.25
LYSMD3-202ENST00000453259 FAM86C2PA6NEL3 165 aa16.59■□□□□ 0.25
LYSMD3-202ENST00000453259 DCXO43602 365 aa16.59■□□□□ 0.25
LYSMD3-202ENST00000453259 UBA1P22314 1058 aaKnown RBP16.59■□□□□ 0.25
LYSMD3-202ENST00000453259 FAM117BQ6P1L5 589 aa16.59■□□□□ 0.25
LYSMD3-202ENST00000453259 UPF3BQ9BZI7 483 aaKnown RBP16.59■□□□□ 0.25
LYSMD3-202ENST00000453259 LMAN2LQ9H0V9 348 aa16.59■□□□□ 0.25
LYSMD3-202ENST00000453259 MLXIPQ9HAP2 919 aa16.59■□□□□ 0.25
LYSMD3-202ENST00000453259 ZSWIM5Q9P217 1185 aa16.59■□□□□ 0.25
LYSMD3-202ENST00000453259 ZNF215Q9UL58 517 aaPredicted RBP16.59■□□□□ 0.25
LYSMD3-202ENST00000453259 PCDHA1Q9Y5I3 950 aa16.59■□□□□ 0.25
LYSMD3-202ENST00000453259 RALGAPA2Q2PPJ7 1873 aa16.59■□□□□ 0.25
LYSMD3-202ENST00000453259 POTEB3A0JP26 581 aa16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 B4E1Z4 1266 aa16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 KLRF2D3W0D1 207 aa16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 C5orf67F2Z3F1 127 aa16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 NOP56O00567 594 aaKnown RBP16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 RB1P06400 928 aa16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 MYCLP12524 364 aaPredicted RBP16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 IL9P15248 144 aa16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 GPM6BQ13491 265 aa16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 NEDD9Q14511 834 aa16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 IFIT1BQ5T764 474 aaKnown RBP16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 POTEBQ6S5H4 581 aa16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 TMEM192Q8IY95 271 aa16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 RILPL2Q969X0 211 aa16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 POP1Q99575 1024 aaKnown RBP16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 OSBPL3Q9H4L5 887 aa16.58■□□□□ 0.24
LYSMD3-202ENST00000453259 GCOM1H8Y6P7 765 aaPredicted RBP16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 LGALS2P05162 132 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 RPLP2P05387 115 aaKnown RBP16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 POLR2MP0CAP2 368 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 SMIM10L2AP0DMW4 78 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 SMIM10L2BP0DMW5 78 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 ICAM3P32942 547 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 ZNF200P98182 395 aaPredicted RBP16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 ZP2Q05996 745 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 HIC1Q14526 733 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 METTL7BQ6UX53 244 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 RPAINQ86UA6 219 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 ADHFE1Q8IWW8 467 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 C11orf84Q9BUA3 381 aaPredicted RBP16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 IFIH1Q9BYX4 1025 aaKnown RBP16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 VAT1LQ9HCJ6 419 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 DIAPH3Q9NSV4 1193 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 MYH7BA7E2Y1 1941 aa16.57■□□□□ 0.24
LYSMD3-202ENST00000453259 FRMPD4Q14CM0 1322 aa16.56■□□□□ 0.24
LYSMD3-202ENST00000453259 C19orf67A6NJJ6 358 aa16.56■□□□□ 0.24
LYSMD3-202ENST00000453259 FAM26DQ5JW98 314 aa16.56■□□□□ 0.24
LYSMD3-202ENST00000453259 XRRA1Q6P2D8 792 aa16.56■□□□□ 0.24
LYSMD3-202ENST00000453259 FAM43BQ6ZT52 329 aaPredicted RBP16.56■□□□□ 0.24
LYSMD3-202ENST00000453259 INPP4AQ96PE3 977 aaPredicted RBP16.56■□□□□ 0.24
LYSMD3-202ENST00000453259 RNPEPQ9H4A4 650 aa16.56■□□□□ 0.24
LYSMD3-202ENST00000453259 PALM3A6NDB9 673 aaPredicted RBP16.55■□□□□ 0.24
LYSMD3-202ENST00000453259 FIBPO43427 364 aa16.55■□□□□ 0.24
LYSMD3-202ENST00000453259 RRP1P56182 461 aaKnown RBP16.55■□□□□ 0.24
LYSMD3-202ENST00000453259 SP2Q02086 613 aa16.55■□□□□ 0.24
LYSMD3-202ENST00000453259 TCEAL5Q5H9L2 206 aa16.55■□□□□ 0.24
LYSMD3-202ENST00000453259 TAF2Q6P1X5 1199 aa16.55■□□□□ 0.24
LYSMD3-202ENST00000453259 GIMAP8Q8ND71 665 aaPredicted RBP16.55■□□□□ 0.24
LYSMD3-202ENST00000453259 IL17RAQ96F46 866 aa16.55■□□□□ 0.24
LYSMD3-202ENST00000453259 MAD2L2Q9UI95 211 aa16.55■□□□□ 0.24
LYSMD3-202ENST00000453259 NRCAMQ92823 1304 aa16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 H3BQ06 376 aaPredicted RBP16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 TREHO43280 583 aa16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 PPP1R11O60927 126 aaPredicted RBP16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 HOXA13P31271 388 aaPredicted RBP16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 SEC23AQ15436 765 aa16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 CTC1Q2NKJ3 1217 aa16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 CWC27Q6UX04 472 aaKnown RBP16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 SMC5Q8IY18 1101 aa16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 STAG2Q8N3U4 1231 aa16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 FIBCD1Q8N539 461 aa16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 SENP7Q9BQF6 1050 aa16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 PLVAPQ9BX97 442 aa16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 RIOX1Q9H6W3 641 aa16.54■□□□□ 0.24
LYSMD3-202ENST00000453259 NLRC5Q86WI3 1866 aa16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 PNMA6FA0A0J9YX94 578 aa16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 SPATA31C2B4DYI2 1134 aa16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 ADAM17P78536 824 aa16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 TRDNQ13061 729 aa16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 SMAD2Q15796 467 aaKnown RBP16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 RSPH3Q86UC2 560 aa16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 IL31RAQ8NI17 732 aa16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 CLP1Q92989 425 aaKnown RBP16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 PPP2R3CQ969Q6 453 aa16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 UIMC1Q96RL1 719 aa16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 GPR20Q99678 358 aa16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 LNPKQ9C0E8 428 aa16.53■□□□□ 0.24
LYSMD3-202ENST00000453259 ADGRA3Q8IWK6 1321 aa16.52■□□□□ 0.24
LYSMD3-202ENST00000453259 UPP2O95045 317 aa16.52■□□□□ 0.24
LYSMD3-202ENST00000453259 CTSHP09668 335 aa16.52■□□□□ 0.24
LYSMD3-202ENST00000453259 CTNNB1P35222 781 aa16.52■□□□□ 0.24
LYSMD3-202ENST00000453259 BMPR1AP36894 532 aa16.52■□□□□ 0.24
LYSMD3-202ENST00000453259 GRM4Q14833 912 aa16.52■□□□□ 0.24
LYSMD3-202ENST00000453259 MFSD14AQ96MC6 490 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms