RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 FEM1BQ9UK73 627 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 ADAMTS5Q9UNA0 930 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 MYPNQ86TC9 1320 aa12.01□□□□□ -0.49
PKP4-206ENST00000452162 VWA5AO00534 786 aa12□□□□□ -0.49
PKP4-206ENST00000452162 SLC37A4O43826 429 aa12□□□□□ -0.49
PKP4-206ENST00000452162 TECP42680 631 aa12□□□□□ -0.49
PKP4-206ENST00000452162 FXR2P51116 673 aaKnown RBP eCLIP12□□□□□ -0.497e-7■■■□□ 17.6
PKP4-206ENST00000452162 GOLGA8FQ08AF8 430 aa12□□□□□ -0.49
PKP4-206ENST00000452162 GOLGA8DPQ0D2H9 430 aa12□□□□□ -0.49
PKP4-206ENST00000452162 UBE2SQ16763 222 aa12□□□□□ -0.49
PKP4-206ENST00000452162 CEP135Q66GS9 1140 aa12□□□□□ -0.49
PKP4-206ENST00000452162 PRPF38AQ8NAV1 312 aaKnown RBP12□□□□□ -0.49
PKP4-206ENST00000452162 PLIN2Q99541 437 aa12□□□□□ -0.49
PKP4-206ENST00000452162 PORCNQ9H237 461 aa12□□□□□ -0.49
PKP4-206ENST00000452162 ADD3Q9UEY8 706 aaKnown RBP12□□□□□ -0.49
PKP4-206ENST00000452162 GDAQ9Y2T3 454 aa12□□□□□ -0.49
PKP4-206ENST00000452162 TRIM17Q9Y577 477 aa12□□□□□ -0.49
PKP4-206ENST00000452162 TDP2O95551 362 aa12□□□□□ -0.49
PKP4-206ENST00000452162 PBX1P40424 430 aa12□□□□□ -0.49
PKP4-206ENST00000452162 PRCPP42785 496 aa12□□□□□ -0.49
PKP4-206ENST00000452162 STAT2P52630 851 aa12□□□□□ -0.49
PKP4-206ENST00000452162 IKQ13123 557 aaPredicted RBP12□□□□□ -0.49
PKP4-206ENST00000452162 KIF22Q14807 665 aa12□□□□□ -0.49
PKP4-206ENST00000452162 TMEM132BQ14DG7 1078 aa12□□□□□ -0.49
PKP4-206ENST00000452162 PTPN14Q15678 1187 aa12□□□□□ -0.49
PKP4-206ENST00000452162 CALCRLQ16602 461 aa12□□□□□ -0.49
PKP4-206ENST00000452162 KMT5BQ4FZB7 885 aa12□□□□□ -0.49
PKP4-206ENST00000452162 OTOP1Q7RTM1 612 aa12□□□□□ -0.49
PKP4-206ENST00000452162 ADSSL1Q8N142 457 aa12□□□□□ -0.49
PKP4-206ENST00000452162 NELFBQ8WX92 580 aa12□□□□□ -0.49
PKP4-206ENST00000452162 CUL5Q93034 780 aa12□□□□□ -0.49
PKP4-206ENST00000452162 PPP1R13BQ96KQ4 1090 aa12□□□□□ -0.49
PKP4-206ENST00000452162 EFCC1Q9HA90 598 aa12□□□□□ -0.49
PKP4-206ENST00000452162 ZNFX1Q9P2E3 1918 aaKnown RBP12□□□□□ -0.49
PKP4-206ENST00000452162 TEX33O43247 280 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 RHOBTB3O94955 611 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 QRICH1Q2TAL8 776 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 CTU1Q7Z7A3 348 aaKnown RBP11.99□□□□□ -0.49
PKP4-206ENST00000452162 TC2NQ8N9U0 490 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 REPS2Q8NFH8 660 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 CTAGE1Q96RT6 745 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 LIMA1Q9UHB6 759 aaKnown RBP11.99□□□□□ -0.49
PKP4-206ENST00000452162 PAXBP1Q9Y5B6 917 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 BRCA2P51587 3418 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 COBLO75128 1261 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 MRPL12P52815 198 aaKnown RBP11.99□□□□□ -0.49
PKP4-206ENST00000452162 SNAP25P60880 206 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 PLS1Q14651 629 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 PPP4R3AQ6IN85 833 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 MB21D1Q8N884 522 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 CHURC1Q8WUH1 139 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 C7orf25Q9BPX7 421 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 SPATC1LQ9H0A9 340 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 PLXNB2O15031 1838 aa11.99□□□□□ -0.49
PKP4-206ENST00000452162 LRRC10BA6NIK2 292 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 PLA2G6O60733 806 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 TXKP42681 527 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 FCGRTP55899 365 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 FAM160B2Q86V87 743 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 FCHSD1Q86WN1 690 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 GIMAP8Q8ND71 665 aaPredicted RBP11.98□□□□□ -0.49
PKP4-206ENST00000452162 MOV10L1Q9BXT6 1211 aaKnown RBP11.98□□□□□ -0.49
PKP4-206ENST00000452162 TRIM9Q9C026 710 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 PSTPIP2Q9H939 334 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 ZNF214Q9UL59 606 aaPredicted RBP11.98□□□□□ -0.49
PKP4-206ENST00000452162 PRR12Q9ULL5 1215 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 MYH7BA7E2Y1 1941 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 KIF2AO00139 706 aaPredicted RBP11.98□□□□□ -0.49
PKP4-206ENST00000452162 GRB10Q13322 594 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 KRT31Q15323 416 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 BTNL9Q6UXG8 535 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 CPXCR1Q8N123 301 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 PNMA5Q96PV4 448 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 GLT8D2Q9H1C3 349 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 SLC38A10Q9HBR0 1119 aa11.98□□□□□ -0.49
PKP4-206ENST00000452162 TNPO2O14787 897 aaKnown RBP11.97□□□□□ -0.49
PKP4-206ENST00000452162 ARHGAP6O43182 974 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 CTIFO43310 598 aaKnown RBP11.97□□□□□ -0.49
PKP4-206ENST00000452162 CCNA1P78396 465 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 SPAG1Q07617 926 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 PDIA5Q14554 519 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 CDC37Q16543 378 aaPredicted RBP11.97□□□□□ -0.49
PKP4-206ENST00000452162 TMEM266Q2M3C6 531 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 SYDE2Q5VT97 1194 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 CALML4Q96GE6 196 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 MCOLN1Q9GZU1 580 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 RAVER2Q9HCJ3 691 aaKnown RBP11.97□□□□□ -0.49
PKP4-206ENST00000452162 LRWD1Q9UFC0 647 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 GABRQQ9UN88 632 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 MAPK8IP1Q9UQF2 711 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 ZBED4O75132 1171 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 GCFC2P16383 781 aaKnown RBP11.97□□□□□ -0.49
PKP4-206ENST00000452162 STAT3P40763 770 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 ADKP55263 362 aaKnown RBP11.97□□□□□ -0.49
PKP4-206ENST00000452162 FILIP1LQ4L180 1135 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 TCP11X2Q5H9J9 407 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 WDR78Q5VTH9 848 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 BAG1Q99933 345 aaPredicted RBP11.97□□□□□ -0.49
PKP4-206ENST00000452162 BLOC1S4Q9NUP1 217 aa11.97□□□□□ -0.49
PKP4-206ENST00000452162 STK17AQ9UEE5 414 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms