RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 FAM217BQ9NTX9 383 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-208ENST00000452047 TELO2Q9Y4R8 837 aa14.34□□□□□ -0.11
CPSF4-208ENST00000452047 MYO9BQ13459 2157 aa14.33□□□□□ -0.11
CPSF4-208ENST00000452047 GOLGA8AA7E2F4 631 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 GOLGA8BA8MQT2 603 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 ZBBXA8MT70 800 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 H3BRB1 525 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 ACTN1P12814 892 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 CPA1P15085 419 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 ATP2A2P16615 1042 aaKnown RBP14.33□□□□□ -0.12
CPSF4-208ENST00000452047 ITGB5P18084 799 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 CDC27P30260 824 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 RABGGTBP53611 331 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 ZNF200P98182 395 aaPredicted RBP14.33□□□□□ -0.12
CPSF4-208ENST00000452047 PTK7Q13308 1070 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 TRAF7Q6Q0C0 670 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 LRRC8DQ7L1W4 858 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 GPRASP2Q96D09 838 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 TUT1Q9H6E5 874 aaKnown RBP14.33□□□□□ -0.12
CPSF4-208ENST00000452047 MSRAQ9UJ68 235 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 SNX14Q9Y5W7 946 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 MUC3AQ02505 3323 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 NID2Q14112 1375 aa14.33□□□□□ -0.12
CPSF4-208ENST00000452047 DLL1O00548 723 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 NOP56O00567 594 aaKnown RBP14.32□□□□□ -0.12
CPSF4-208ENST00000452047 CXCL10P02778 98 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 KCNA2P16389 499 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 PPP1R18Q6NYC8 613 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 NLRX1Q86UT6 975 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 SERINC5Q86VE9 423 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 TEX2Q8IWB9 1127 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 FBXL16Q8N461 479 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 JAKMIP1Q96N16 626 aaKnown RBP14.32□□□□□ -0.12
CPSF4-208ENST00000452047 USP26Q9BXU7 913 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 NKX2-4Q9H2Z4 354 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 PCDHA6Q9UN73 950 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 PCDHA8Q9Y5H6 950 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 PCDHA11Q9Y5I1 949 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 UBIAD1Q9Y5Z9 338 aa14.32□□□□□ -0.12
CPSF4-208ENST00000452047 SPDYE3A6NKU9 549 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 hCG_1984214I3L0E3 225 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 STXBP3O00186 592 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 NBNO60934 754 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 ATP9AO75110 1047 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 BAIAP3O94812 1187 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 PARNO95453 639 aaKnown RBP14.31□□□□□ -0.12
CPSF4-208ENST00000452047 SMIM10L2AP0DMW4 78 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 SMIM10L2BP0DMW5 78 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 MYOGP15173 224 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 NAPAP54920 295 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 MBTPS1Q14703 1052 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 ZNF618Q5T7W0 954 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 TRIM50Q86XT4 487 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.31□□□□□ -0.12
CPSF4-208ENST00000452047 ZNF713Q8N859 430 aaPredicted RBP14.31□□□□□ -0.12
CPSF4-208ENST00000452047 CDHR1Q96JP9 859 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 SLC9A7Q96T83 725 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 AGXT2Q9BYV1 514 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 FTOQ9C0B1 505 aaKnown RBP eCLIP14.31□□□□□ -0.12
CPSF4-208ENST00000452047 PRDM12Q9H4Q4 367 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 SLC28A3Q9HAS3 691 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 RIC8AQ9NPQ8 531 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 BARHL2Q9NY43 387 aa14.31□□□□□ -0.12
CPSF4-208ENST00000452047 V9GY48 417 aaPredicted RBP14.31□□□□□ -0.12
CPSF4-208ENST00000452047 REC8O95072 547 aa14.3□□□□□ -0.12
CPSF4-208ENST00000452047 ADD1P35611 737 aaKnown RBP14.3□□□□□ -0.12
CPSF4-208ENST00000452047 SP4Q02446 784 aa14.3□□□□□ -0.12
CPSF4-208ENST00000452047 APOBRQ0VD83 1088 aa14.3□□□□□ -0.12
CPSF4-208ENST00000452047 MTMR1Q13613 665 aa14.3□□□□□ -0.12
CPSF4-208ENST00000452047 TCTN1Q2MV58 587 aa14.3□□□□□ -0.12
CPSF4-208ENST00000452047 BLOC1S2Q6QNY1 142 aa14.3□□□□□ -0.12
CPSF4-208ENST00000452047 Q6ZUG5 572 aa14.3□□□□□ -0.12
CPSF4-208ENST00000452047 GIMAP8Q8ND71 665 aaPredicted RBP14.3□□□□□ -0.12
CPSF4-208ENST00000452047 PHOSPHO2Q8TCD6 241 aa14.3□□□□□ -0.12
CPSF4-208ENST00000452047 BRF1Q92994 677 aa14.3□□□□□ -0.12
CPSF4-208ENST00000452047 RNPEPQ9H4A4 650 aa14.3□□□□□ -0.12
CPSF4-208ENST00000452047 MICAL3Q7RTP6 2002 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 C17orf102A2RUQ5 167 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 RBAK-RBAKDNI3L0D1 243 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 TREHO43280 583 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 RPS6KB1P23443 525 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 CLK2P49760 499 aaKnown RBP14.29□□□□□ -0.12
CPSF4-208ENST00000452047 METAP2P50579 478 aaKnown RBP eCLIP14.29□□□□□ -0.12
CPSF4-208ENST00000452047 WDR5P61964 334 aaKnown RBP14.29□□□□□ -0.12
CPSF4-208ENST00000452047 ADAM17P78536 824 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 FGD1P98174 961 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 ADGRE1Q14246 886 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 PPP2R2DQ66LE6 453 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 CNKSR3Q6P9H4 555 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 ATP6V0A1Q93050 837 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 EHMT1Q9H9B1 1298 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 JADE2Q9NQC1 790 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 ZNF215Q9UL58 517 aaPredicted RBP14.29□□□□□ -0.12
CPSF4-208ENST00000452047 SIP14410 1827 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 KAT6AQ92794 2004 aa14.29□□□□□ -0.12
CPSF4-208ENST00000452047 CCDC196A0A1B0GTZ2 297 aa14.28□□□□□ -0.12
CPSF4-208ENST00000452047 MAFGO15525 162 aa14.28□□□□□ -0.12
CPSF4-208ENST00000452047 EPB41L2O43491 1005 aaKnown RBP14.28□□□□□ -0.12
CPSF4-208ENST00000452047 FOSP01100 380 aaPredicted RBP14.28□□□□□ -0.12
CPSF4-208ENST00000452047 CA3P07451 260 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms