RNA–Protein interactions for RNA: ENST00000449472.1

CCDC197-203, Transcript of coiled-coil domain containing 197, humanhuman

TSL 3

Gene CCDC197, Length 477 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-203ENST00000449472 STXBP3O00186 592 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 NOP56O00567 594 aaKnown RBP13.28□□□□□ -0.28
CCDC197-203ENST00000449472 REC8O95072 547 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 LGALS2P05162 132 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 MYOGP15173 224 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 RPS6KB1P23443 525 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 RFC2P35250 354 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 NAPAP54920 295 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 SP4Q02446 784 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 CYP2W1Q8TAV3 490 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 PGBD1Q96JS3 809 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 SENP7Q9BQF6 1050 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 USP26Q9BXU7 913 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 FTOQ9C0B1 505 aaKnown RBP eCLIP13.28□□□□□ -0.28
CCDC197-203ENST00000449472 MTIF3Q9H2K0 278 aaKnown RBP13.28□□□□□ -0.28
CCDC197-203ENST00000449472 TUT1Q9H6E5 874 aaKnown RBP13.28□□□□□ -0.28
CCDC197-203ENST00000449472 RIC8AQ9NPQ8 531 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 PKD2L1Q9P0L9 805 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 UBIAD1Q9Y5Z9 338 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 SLC4A7Q9Y6M7 1214 aa13.28□□□□□ -0.28
CCDC197-203ENST00000449472 ADAMTS3O15072 1205 aa13.27□□□□□ -0.29
CCDC197-203ENST00000449472 PPFIA3O75145 1194 aa13.27□□□□□ -0.29
CCDC197-203ENST00000449472 CKBP12277 381 aa13.27□□□□□ -0.29
CCDC197-203ENST00000449472 SELPP16109 830 aa13.27□□□□□ -0.29
CCDC197-203ENST00000449472 KCNA2P16389 499 aa13.27□□□□□ -0.29
CCDC197-203ENST00000449472 METAP2P50579 478 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCDC197-203ENST00000449472 TRIM71Q2Q1W2 868 aaKnown RBP13.27□□□□□ -0.29
CCDC197-203ENST00000449472 UTP14CQ5TAP6 766 aaKnown RBP13.27□□□□□ -0.29
CCDC197-203ENST00000449472 CAGE1Q8TC20 777 aa13.27□□□□□ -0.29
CCDC197-203ENST00000449472 AFAP1L1Q8TED9 768 aa13.27□□□□□ -0.29
CCDC197-203ENST00000449472 RNPEPQ9H4A4 650 aa13.27□□□□□ -0.29
CCDC197-203ENST00000449472 TMEM260Q9NX78 707 aa13.27□□□□□ -0.29
CCDC197-203ENST00000449472 PPP4R2Q9NY27 417 aa13.27□□□□□ -0.29
CCDC197-203ENST00000449472 BARHL2Q9NY43 387 aa13.27□□□□□ -0.29
CCDC197-203ENST00000449472 MSRAQ9UJ68 235 aa13.27□□□□□ -0.29
CCDC197-203ENST00000449472 YBX2Q9Y2T7 364 aaKnown RBP13.27□□□□□ -0.29
CCDC197-203ENST00000449472 SPTBN5Q9NRC6 3674 aaKnown RBP13.27□□□□□ -0.29
CCDC197-203ENST00000449472 TMEM265A0A087WTH1 108 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 TREHO43280 583 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 NBNO60934 754 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 PFKMP08237 780 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 SMIM10L2AP0DMW4 78 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 SMIM10L2BP0DMW5 78 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 PTK7Q13308 1070 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 TCTN1Q2MV58 587 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 ZNF618Q5T7W0 954 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 TRAF7Q6Q0C0 670 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 LRRC8DQ7L1W4 858 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 TRIM50Q86XT4 487 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 FBXL16Q8N461 479 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 CCDC155Q8N6L0 562 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 PRUNE2Q8WUY3 3088 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 KAT6AQ92794 2004 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 GPRASP2Q96D09 838 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 LARP6Q9BRS8 491 aaKnown RBP13.26□□□□□ -0.29
CCDC197-203ENST00000449472 AGXT2Q9BYV1 514 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 NKX2-4Q9H2Z4 354 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 JADE2Q9NQC1 790 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
CCDC197-203ENST00000449472 GSTTP1A0A1W2PQM5 241 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 C17orf102A2RUQ5 167 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 ARP10275 920 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 ACTN1P12814 892 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 FOSL2P15408 326 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 ATP2A2P16615 1042 aaKnown RBP13.25□□□□□ -0.29
CCDC197-203ENST00000449472 PSMA5P28066 241 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 ADCY7P51828 1080 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 RCAN1P53805 252 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 CCT2P78371 535 aaKnown RBP13.25□□□□□ -0.29
CCDC197-203ENST00000449472 MTMR1Q13613 665 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 MBTPS1Q14703 1052 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 RAB30Q15771 203 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 PKN1Q16512 942 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 PFKFB3Q16875 520 aaPredicted RBP13.25□□□□□ -0.29
CCDC197-203ENST00000449472 RUFY3Q7L099 469 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 GIMAP8Q8ND71 665 aaPredicted RBP13.25□□□□□ -0.29
CCDC197-203ENST00000449472 ATP6V0A1Q93050 837 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 PHKBQ93100 1093 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 ZSWIM6Q9HCJ5 1215 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 TANC1Q9C0D5 1861 aa13.25□□□□□ -0.29
CCDC197-203ENST00000449472 CCDC196A0A1B0GTZ2 297 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 PRPF3O43395 683 aaKnown RBP13.24□□□□□ -0.29
CCDC197-203ENST00000449472 FOSP01100 380 aaPredicted RBP13.24□□□□□ -0.29
CCDC197-203ENST00000449472 CXCL10P02778 98 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 SCG2P13521 617 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 PDIA3P30101 505 aaKnown RBP13.24□□□□□ -0.29
CCDC197-203ENST00000449472 HOXC8P31273 242 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 TCF7P36402 384 aaPredicted RBP13.24□□□□□ -0.29
CCDC197-203ENST00000449472 THPOP40225 353 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 CLK2P49760 499 aaKnown RBP13.24□□□□□ -0.29
CCDC197-203ENST00000449472 RBL2Q08999 1139 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 NTRK3Q16288 839 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 JAKMIP3Q5VZ66 844 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 PPP1R18Q6NYC8 613 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 TMCO2Q7Z6W1 182 aaPredicted RBP13.24□□□□□ -0.29
CCDC197-203ENST00000449472 SERINC5Q86VE9 423 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 SEPT1Q8WYJ6 367 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 CDHR1Q96JP9 859 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 MXRA8Q9BRK3 442 aa13.24□□□□□ -0.29
CCDC197-203ENST00000449472 PRDM12Q9H4Q4 367 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms