RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 TGFB3P10600 412 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 SYT1P21579 422 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 CST5P28325 142 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-211ENST00000449159 NKX3-2P78367 333 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 SP4Q02446 784 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 ITGB3BPQ13352 177 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-211ENST00000449159 KCNA10Q16322 511 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 LETM2Q2VYF4 491 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 HSDL1Q3SXM5 330 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 GNASQ5JWF2 1037 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 CELF3Q5SZQ8 465 aaKnown RBP12.08□□□□□ -0.48
SMPD4-211ENST00000449159 MCTP1Q6DN14 999 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 KCNV1Q6PIU1 500 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 CYFIP1Q7L576 1253 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 NIPA1Q7RTP0 329 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 NEK8Q86SG6 692 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 RNF180Q86T96 592 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 NOSTRINQ8IVI9 506 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 SLC17A8Q8NDX2 589 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 EMID1Q96A84 441 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-211ENST00000449159 FERMT2Q96AC1 680 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 CDHR1Q96JP9 859 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 FOXP1Q9H334 677 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-211ENST00000449159 SPC25Q9HBM1 224 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 Q9Y3F1 56 aa12.08□□□□□ -0.48
SMPD4-211ENST00000449159 CYP3A7-CYP3A51PA0A087WV96 503 aa12.07□□□□□ -0.48
SMPD4-211ENST00000449159 VPS37CA5D8V6 355 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-211ENST00000449159 A6NJR5 290 aa12.07□□□□□ -0.48
SMPD4-211ENST00000449159 CCNT1O60563 726 aaKnown RBP12.07□□□□□ -0.48
SMPD4-211ENST00000449159 HSP90AA1P07900 732 aaKnown RBP12.07□□□□□ -0.48
SMPD4-211ENST00000449159 MMP3P08254 477 aa12.07□□□□□ -0.48
SMPD4-211ENST00000449159 COL6A1P12109 1028 aa12.07□□□□□ -0.48
SMPD4-211ENST00000449159 CYP3A7P24462 503 aa12.07□□□□□ -0.48
SMPD4-211ENST00000449159 U2AF2P26368 475 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMPD4-211ENST00000449159 ACLYP53396 1101 aa12.07□□□□□ -0.48
SMPD4-211ENST00000449159 SETQ01105 290 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-211ENST00000449159 GNL2Q13823 731 aaKnown RBP12.07□□□□□ -0.48
SMPD4-211ENST00000449159 DHX37Q8IY37 1157 aaKnown RBP12.07□□□□□ -0.48
SMPD4-211ENST00000449159 MBOAT7Q96N66 472 aa12.07□□□□□ -0.48
SMPD4-211ENST00000449159 GDF15Q99988 308 aa12.07□□□□□ -0.48
SMPD4-211ENST00000449159 SENP7Q9BQF6 1050 aa12.07□□□□□ -0.48
SMPD4-211ENST00000449159 DDX25Q9UHL0 483 aaKnown RBP12.07□□□□□ -0.48
SMPD4-211ENST00000449159 ZMYND8Q9ULU4 1186 aaPredicted RBP12.07□□□□□ -0.48
SMPD4-211ENST00000449159 MYH9P35579 1960 aaKnown RBP12.07□□□□□ -0.48
SMPD4-211ENST00000449159 A0A1W2PQ45 241 aaPredicted RBP12.06□□□□□ -0.48
SMPD4-211ENST00000449159 A0A1W2PQY0 241 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 DDX39AO00148 427 aaKnown RBP12.06□□□□□ -0.48
SMPD4-211ENST00000449159 IPO5O00410 1097 aaKnown RBP12.06□□□□□ -0.48
SMPD4-211ENST00000449159 DLL1O00548 723 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 MSH4O15457 936 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 DHX15O43143 795 aaKnown RBP12.06□□□□□ -0.48
SMPD4-211ENST00000449159 ASGR1P07306 291 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 ZNF286BP0CG31 522 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 ATP2B1P20020 1258 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 PDCP20941 246 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 BMP8BP34820 402 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 CPT1AP50416 773 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 LAMC2Q13753 1193 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 NEDD9Q14511 834 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 NBR1Q14596 966 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 Q4G0T1 1027 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 GPR153Q6NV75 609 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 MOXD1Q6UVY6 613 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 METTL7BQ6UX53 244 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 CXCL17Q6UXB2 119 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 FERMT3Q86UX7 667 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 POTEDQ86YR6 584 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 PPTC7Q8NI37 304 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 SPATA33Q96N06 139 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 C11orf49Q9H6J7 331 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 MLXIPQ9HAP2 919 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 PHF24Q9UPV7 400 aa12.06□□□□□ -0.48
SMPD4-211ENST00000449159 MAFGO15525 162 aa12.05□□□□□ -0.48
SMPD4-211ENST00000449159 CCNE2O96020 404 aa12.05□□□□□ -0.48
SMPD4-211ENST00000449159 MYL3P08590 195 aa12.05□□□□□ -0.48
SMPD4-211ENST00000449159 TOB1P50616 345 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-211ENST00000449159 PSMC6P62333 389 aa12.05□□□□□ -0.48
SMPD4-211ENST00000449159 PURAQ00577 322 aaKnown RBP12.05□□□□□ -0.48
SMPD4-211ENST00000449159 PPP4R3AQ6IN85 833 aa12.05□□□□□ -0.48
SMPD4-211ENST00000449159 TDHQ8IZJ6 230 aa12.05□□□□□ -0.48
SMPD4-211ENST00000449159 PCSK9Q8NBP7 692 aaKnown RBP12.05□□□□□ -0.48
SMPD4-211ENST00000449159 ETNPPLQ8TBG4 499 aa12.05□□□□□ -0.48
SMPD4-211ENST00000449159 PPP1R13LQ8WUF5 828 aa12.05□□□□□ -0.48
SMPD4-211ENST00000449159 GPR20Q99678 358 aa12.05□□□□□ -0.48
SMPD4-211ENST00000449159 ZNF577Q9BSK1 485 aa12.05□□□□□ -0.48
SMPD4-211ENST00000449159 TSEN34Q9BSV6 310 aaKnown RBP12.05□□□□□ -0.48
SMPD4-211ENST00000449159 SENP6Q9GZR1 1112 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-211ENST00000449159 JPH1Q9HDC5 661 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-211ENST00000449159 MTMR6Q9Y217 621 aa12.05□□□□□ -0.48
SMPD4-211ENST00000449159 NFASCO94856 1347 aa12.05□□□□□ -0.48
SMPD4-211ENST00000449159 TRIP12Q14669 1992 aaPredicted RBP12.05□□□□□ -0.48
SMPD4-211ENST00000449159 PRUNE2Q8WUY3 3088 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 MOXD2PA6NHM9 499 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 NOP56O00567 594 aaKnown RBP12.04□□□□□ -0.48
SMPD4-211ENST00000449159 STX6O43752 255 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 HOXD8P13378 290 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-211ENST00000449159 GCFC2P16383 781 aaKnown RBP12.04□□□□□ -0.48
SMPD4-211ENST00000449159 SYN1P17600 705 aa12.04□□□□□ -0.48
SMPD4-211ENST00000449159 MAGEA10P43363 369 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-211ENST00000449159 ATN1P54259 1190 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms