RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 RNF10Q8N5U6 811 aaKnown RBP17.37■□□□□ 0.37
CHRD-205ENST00000448472 SELENOSQ9BQE4 189 aa17.37■□□□□ 0.37
CHRD-205ENST00000448472 MMTAG2Q9BU76 263 aaKnown RBP17.37■□□□□ 0.37
CHRD-205ENST00000448472 ZNF287Q9HBT7 754 aa17.37■□□□□ 0.37
CHRD-205ENST00000448472 ZNF804BA4D1E1 1349 aa17.36■□□□□ 0.37
CHRD-205ENST00000448472 BAP1Q92560 729 aa17.36■□□□□ 0.37
CHRD-205ENST00000448472 KIAA1024Q9UPX6 916 aa17.36■□□□□ 0.37
CHRD-205ENST00000448472 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.36■□□□□ 0.37
CHRD-205ENST00000448472 ATP6V0A2Q9Y487 856 aa17.36■□□□□ 0.37
CHRD-205ENST00000448472 CHD4Q14839 1912 aa17.36■□□□□ 0.37
CHRD-205ENST00000448472 USP17L5A8MUK1 530 aa17.36■□□□□ 0.37
CHRD-205ENST00000448472 ADCY7P51828 1080 aa17.36■□□□□ 0.37
CHRD-205ENST00000448472 ITPK1Q13572 414 aa17.36■□□□□ 0.37
CHRD-205ENST00000448472 DDB1Q16531 1140 aa17.36■□□□□ 0.37
CHRD-205ENST00000448472 WHAMMQ8TF30 809 aa17.36■□□□□ 0.37
CHRD-205ENST00000448472 BLOC1S4Q9NUP1 217 aa17.36■□□□□ 0.37
CHRD-205ENST00000448472 AMACRQ9UHK6 382 aa17.36■□□□□ 0.37
CHRD-205ENST00000448472 E9PMD0 336 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 TEX11Q8IYF3 940 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 LRRC45Q96CN5 670 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 CEP72Q9P209 647 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 MPHOSPH10O00566 681 aaKnown RBP17.35■□□□□ 0.37
CHRD-205ENST00000448472 CPP00450 1065 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 COASYQ13057 564 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 KCNV1Q6PIU1 500 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 DAAM2Q86T65 1068 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 CLEC10AQ8IUN9 316 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 SUGP1Q8IWZ8 645 aaKnown RBP17.35■□□□□ 0.37
CHRD-205ENST00000448472 ZMYND12Q9H0C1 365 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 HMGB1P1B2RPK0 211 aaPredicted RBP17.35■□□□□ 0.37
CHRD-205ENST00000448472 DAPK3O43293 454 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 SKOR1P84550 965 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 KCNMA1Q12791 1236 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 KDM7AQ6ZMT4 941 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 IQCKQ8N0W5 287 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 TAF1DQ9H5J8 278 aaPredicted RBP17.35■□□□□ 0.37
CHRD-205ENST00000448472 RNF14Q9UBS8 474 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 STK17AQ9UEE5 414 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 PCDHA12Q9UN75 941 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 ATP8A1Q9Y2Q0 1164 aa17.35■□□□□ 0.37
CHRD-205ENST00000448472 FGRP09769 529 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 ABCB4P21439 1286 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 GPBP1Q86WP2 473 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 CCDC65Q8IXS2 484 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 RAD54LQ92698 747 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 CEP89Q96ST8 783 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 PVALEFA0A1B0GWK0 134 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 SSU72P8A0A1W2PR75 194 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 CETN3O15182 167 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 ITIH3Q06033 890 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
CHRD-205ENST00000448472 SLC18A3Q16572 532 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 SETDB2Q96T68 719 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 LRRC27Q9C0I9 530 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 FBXL5Q9UKA1 691 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 F8W031 263 aaPredicted RBP17.34■□□□□ 0.37
CHRD-205ENST00000448472 EPB41P11171 864 aaKnown RBP17.34■□□□□ 0.37
CHRD-205ENST00000448472 DHX9Q08211 1270 aaKnown RBP17.34■□□□□ 0.37
CHRD-205ENST00000448472 NAB2Q15742 525 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 FBXO33Q7Z6M2 555 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 CEP95Q96GE4 821 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 PNMA5Q96PV4 448 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 RIC8AQ9NPQ8 531 aa17.34■□□□□ 0.37
CHRD-205ENST00000448472 SART1O43290 800 aaKnown RBP17.33■□□□□ 0.37
CHRD-205ENST00000448472 TLR2O60603 784 aa17.33■□□□□ 0.37
CHRD-205ENST00000448472 NR2F2P24468 414 aa17.33■□□□□ 0.37
CHRD-205ENST00000448472 NF2P35240 595 aa17.33■□□□□ 0.37
CHRD-205ENST00000448472 HSD17B3P37058 310 aa17.33■□□□□ 0.37
CHRD-205ENST00000448472 MAGOHP61326 146 aaKnown RBP17.33■□□□□ 0.37
CHRD-205ENST00000448472 SBK1Q52WX2 424 aa17.33■□□□□ 0.37
CHRD-205ENST00000448472 RUFY4Q6ZNE9 571 aa17.33■□□□□ 0.37
CHRD-205ENST00000448472 MAGOHBQ96A72 148 aaKnown RBP17.33■□□□□ 0.37
CHRD-205ENST00000448472 GLI3P10071 1580 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 HNRNPH3P31942 346 aaKnown RBP17.33■□□□□ 0.36
CHRD-205ENST00000448472 SLC16A2P36021 539 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 VPS36Q86VN1 386 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 CCDC13Q8IYE1 715 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 USP38Q8NB14 1042 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 U2AF1L4Q8WU68 220 aaKnown RBP17.33■□□□□ 0.36
CHRD-205ENST00000448472 CELF4Q9BZC1 486 aaKnown RBP17.33■□□□□ 0.36
CHRD-205ENST00000448472 NUCKS1Q9H1E3 243 aaKnown RBP17.33■□□□□ 0.36
CHRD-205ENST00000448472 COL1A1P02452 1464 aaPredicted RBP17.33■□□□□ 0.36
CHRD-205ENST00000448472 FRMD3A2A2Y4 597 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 HGSO14964 777 aaPredicted RBP17.33■□□□□ 0.36
CHRD-205ENST00000448472 CDK8P49336 464 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 ERVK-9P63128 1117 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 ALKBH5Q6P6C2 394 aaKnown RBP17.33■□□□□ 0.36
CHRD-205ENST00000448472 CACNA2D3Q8IZS8 1091 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 CYFIP2Q96F07 1278 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 LZTS2Q9BRK4 669 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 GDF3Q9NR23 364 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 KLC4Q9NSK0 619 aa17.33■□□□□ 0.36
CHRD-205ENST00000448472 DDX25Q9UHL0 483 aaKnown RBP17.33■□□□□ 0.36
CHRD-205ENST00000448472 GMNCA6NCL1 334 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 PALM3A6NDB9 673 aaPredicted RBP17.32■□□□□ 0.36
CHRD-205ENST00000448472 PHF20L1A8MW92 1017 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 KRT13P13646 458 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 SLC9A1P19634 815 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 KCNH2Q12809 1159 aa17.32■□□□□ 0.36
CHRD-205ENST00000448472 HGSNATQ68CP4 663 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms