RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 TMEM106CQ9BVX2 250 aa15.9■□□□□ 0.14
CTSS-202ENST00000448301 CRISPLD2Q9H0B8 497 aa15.9■□□□□ 0.14
CTSS-202ENST00000448301 KCNMB3Q9NPA1 279 aa15.9■□□□□ 0.14
CTSS-202ENST00000448301 NEMFO60524 1076 aa15.89■□□□□ 0.13
CTSS-202ENST00000448301 FARP2O94887 1054 aaPredicted RBP15.89■□□□□ 0.13
CTSS-202ENST00000448301 MCM7P33993 719 aa15.89■□□□□ 0.13
CTSS-202ENST00000448301 GJA8P48165 433 aa15.89■□□□□ 0.13
CTSS-202ENST00000448301 ITGB3BPQ13352 177 aaPredicted RBP15.89■□□□□ 0.13
CTSS-202ENST00000448301 LAMC2Q13753 1193 aa15.89■□□□□ 0.13
CTSS-202ENST00000448301 TNS4Q8IZW8 715 aa15.89■□□□□ 0.13
CTSS-202ENST00000448301 U2AF1L4Q8WU68 220 aaKnown RBP15.89■□□□□ 0.13
CTSS-202ENST00000448301 IPO9Q96P70 1041 aaKnown RBP15.89■□□□□ 0.13
CTSS-202ENST00000448301 SDF4Q9BRK5 362 aa15.89■□□□□ 0.13
CTSS-202ENST00000448301 AP5M1Q9H0R1 490 aa15.89■□□□□ 0.13
CTSS-202ENST00000448301 SPC25Q9HBM1 224 aa15.89■□□□□ 0.13
CTSS-202ENST00000448301 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.89■□□□□ 0.13
CTSS-202ENST00000448301 TBC1D22BQ9NU19 505 aa15.89■□□□□ 0.13
CTSS-202ENST00000448301 PKD2L1Q9P0L9 805 aa15.89■□□□□ 0.13
CTSS-202ENST00000448301 OGDHLQ9ULD0 1010 aa15.89■□□□□ 0.13
CTSS-202ENST00000448301 POTEFA5A3E0 1075 aa15.88■□□□□ 0.13
CTSS-202ENST00000448301 DYNC1LI2O43237 492 aaPredicted RBP15.88■□□□□ 0.13
CTSS-202ENST00000448301 PTGS1P23219 599 aa15.88■□□□□ 0.13
CTSS-202ENST00000448301 CST5P28325 142 aaPredicted RBP15.88■□□□□ 0.13
CTSS-202ENST00000448301 NUCB2P80303 420 aa15.88■□□□□ 0.13
CTSS-202ENST00000448301 NBR1Q14596 966 aa15.88■□□□□ 0.13
CTSS-202ENST00000448301 ZNF174Q15697 407 aa15.88■□□□□ 0.13
CTSS-202ENST00000448301 CYFIP1Q7L576 1253 aa15.88■□□□□ 0.13
CTSS-202ENST00000448301 FAM20AQ96MK3 541 aa15.88■□□□□ 0.13
CTSS-202ENST00000448301 RIT2Q99578 217 aa15.88■□□□□ 0.13
CTSS-202ENST00000448301 MLXIPQ9HAP2 919 aa15.88■□□□□ 0.13
CTSS-202ENST00000448301 ZDHHC9Q9Y397 364 aa15.88■□□□□ 0.13
CTSS-202ENST00000448301 PCDHB6Q9Y5E3 794 aa15.88■□□□□ 0.13
CTSS-202ENST00000448301 CTAGE5O15320 804 aa15.87■□□□□ 0.13
CTSS-202ENST00000448301 DHX15O43143 795 aaKnown RBP15.87■□□□□ 0.13
CTSS-202ENST00000448301 PGK1P00558 417 aa15.87■□□□□ 0.13
CTSS-202ENST00000448301 C6orf222P0C671 652 aaPredicted RBP15.87■□□□□ 0.13
CTSS-202ENST00000448301 CPT1AP50416 773 aa15.87■□□□□ 0.13
CTSS-202ENST00000448301 CALCRLQ16602 461 aa15.87■□□□□ 0.13
CTSS-202ENST00000448301 FOXD4L5Q5VV16 416 aaPredicted RBP15.87■□□□□ 0.13
CTSS-202ENST00000448301 RNF180Q86T96 592 aa15.87■□□□□ 0.13
CTSS-202ENST00000448301 SLFN12Q8IYM2 578 aa15.87■□□□□ 0.13
CTSS-202ENST00000448301 ARRDC4Q8NCT1 418 aa15.87■□□□□ 0.13
CTSS-202ENST00000448301 KLHDC9Q8NEP7 349 aa15.87■□□□□ 0.13
CTSS-202ENST00000448301 PPTC7Q8NI37 304 aa15.87■□□□□ 0.13
CTSS-202ENST00000448301 FOXD4L4Q8WXT5 416 aaPredicted RBP15.87■□□□□ 0.13
CTSS-202ENST00000448301 HAS1Q92839 578 aa15.87■□□□□ 0.13
CTSS-202ENST00000448301 MTMR9Q96QG7 549 aa15.87■□□□□ 0.13
CTSS-202ENST00000448301 BCAS3Q9H6U6 928 aa15.87■□□□□ 0.13
CTSS-202ENST00000448301 JPH1Q9HDC5 661 aaPredicted RBP15.87■□□□□ 0.13
CTSS-202ENST00000448301 CIZ1Q9ULV3 898 aaPredicted RBP15.87■□□□□ 0.13
CTSS-202ENST00000448301 A6NJR5 290 aa15.86■□□□□ 0.13
CTSS-202ENST00000448301 LAD1O00515 517 aa15.86■□□□□ 0.13
CTSS-202ENST00000448301 PSMD10O75832 226 aa15.86■□□□□ 0.13
CTSS-202ENST00000448301 BAG4O95429 457 aaKnown RBP15.86■□□□□ 0.13
CTSS-202ENST00000448301 MMP3P08254 477 aa15.86■□□□□ 0.13
CTSS-202ENST00000448301 LRRC41Q15345 812 aa15.86■□□□□ 0.13
CTSS-202ENST00000448301 FSCN1Q16658 493 aaKnown RBP15.86■□□□□ 0.13
CTSS-202ENST00000448301 HSDL1Q3SXM5 330 aa15.86■□□□□ 0.13
CTSS-202ENST00000448301 BRDTQ58F21 947 aaPredicted RBP15.86■□□□□ 0.13
CTSS-202ENST00000448301 LRCH2Q5VUJ6 765 aa15.86■□□□□ 0.13
CTSS-202ENST00000448301 FAM173BQ6P4H8 233 aa15.86■□□□□ 0.13
CTSS-202ENST00000448301 SPATA33Q96N06 139 aa15.86■□□□□ 0.13
CTSS-202ENST00000448301 TEKT3Q9BXF9 490 aa15.86■□□□□ 0.13
CTSS-202ENST00000448301 TMEM60Q9H2L4 133 aa15.86■□□□□ 0.13
CTSS-202ENST00000448301 SLC9A2Q9UBY0 812 aa15.86■□□□□ 0.13
CTSS-202ENST00000448301 MYADML2A6NDP7 307 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 MARCH6O60337 910 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 SORBS3O60504 671 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 GAS7O60861 476 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 BMP15O95972 392 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 OR52Z1P0C646 297 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 HOXD8P13378 290 aaPredicted RBP15.85■□□□□ 0.13
CTSS-202ENST00000448301 KRT76Q01546 638 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 ZNF746Q6NUN9 644 aaPredicted RBP15.85■□□□□ 0.13
CTSS-202ENST00000448301 C4orf32Q8N8J7 132 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 ANKLE1Q8NAG6 615 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 AFG1LQ8WV93 481 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 UIMC1Q96RL1 719 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 TCEAL9Q9UHQ7 104 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 TCHHQ07283 1943 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 ELP1O95163 1332 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 MYH9P35579 1960 aaKnown RBP15.85■□□□□ 0.13
CTSS-202ENST00000448301 DDX39AO00148 427 aaKnown RBP15.85■□□□□ 0.13
CTSS-202ENST00000448301 DNM1LO00429 736 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 NOP56O00567 594 aaKnown RBP15.85■□□□□ 0.13
CTSS-202ENST00000448301 ZEB2O60315 1214 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 TFRCP02786 760 aaKnown RBP15.85■□□□□ 0.13
CTSS-202ENST00000448301 IRX5P78411 483 aaPredicted RBP15.85■□□□□ 0.13
CTSS-202ENST00000448301 ATP2C1P98194 919 aaPredicted RBP15.85■□□□□ 0.13
CTSS-202ENST00000448301 BEX3Q00994 111 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 PTGDRQ13258 359 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 GNASQ5JWF2 1037 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 CCSAPQ6IQ19 270 aaPredicted RBP15.85■□□□□ 0.13
CTSS-202ENST00000448301 B3GNT9Q6UX72 402 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 SMAP1Q8IYB5 467 aaPredicted RBP15.85■□□□□ 0.13
CTSS-202ENST00000448301 PCSK9Q8NBP7 692 aaKnown RBP15.85■□□□□ 0.13
CTSS-202ENST00000448301 GJA10Q969M2 543 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 ZNF396Q96N95 335 aaPredicted RBP15.85■□□□□ 0.13
CTSS-202ENST00000448301 GPR20Q99678 358 aa15.85■□□□□ 0.13
CTSS-202ENST00000448301 TSEN34Q9BSV6 310 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms