RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 CLP1Q92989 425 aaKnown RBP8.33□□□□□ -1.08
LRRC28-203ENST00000447360 PPP2R3CQ969Q6 453 aa8.33□□□□□ -1.08
LRRC28-203ENST00000447360 ASIC4Q96FT7 647 aa8.33□□□□□ -1.08
LRRC28-203ENST00000447360 IWS1Q96ST2 819 aa8.33□□□□□ -1.08
LRRC28-203ENST00000447360 IFIH1Q9BYX4 1025 aaKnown RBP8.33□□□□□ -1.08
LRRC28-203ENST00000447360 NAPBQ9H115 298 aa8.33□□□□□ -1.08
LRRC28-203ENST00000447360 DDX41Q9UJV9 622 aaKnown RBP8.33□□□□□ -1.08
LRRC28-203ENST00000447360 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.33□□□□□ -1.08
LRRC28-203ENST00000447360 TRIP12Q14669 1992 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-203ENST00000447360 FAM186AA6NE01 2351 aa8.33□□□□□ -1.08
LRRC28-203ENST00000447360 MYO7AQ13402 2215 aa8.33□□□□□ -1.08
LRRC28-203ENST00000447360 MYH4Q9Y623 1939 aa8.33□□□□□ -1.08
LRRC28-203ENST00000447360 GVINP1Q7Z2Y8 2422 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 M0R2C6 588 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 GRM6O15303 877 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 NMT2O60551 498 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 EIF3JO75822 258 aaKnown RBP8.32□□□□□ -1.08
LRRC28-203ENST00000447360 MMP1P03956 469 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 LINC00271P0C7V0 271 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 NDUFV1P49821 464 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 COASYQ13057 564 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 E2F4Q16254 413 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 NSUN6Q8TEA1 469 aaKnown RBP8.32□□□□□ -1.08
LRRC28-203ENST00000447360 FSD1Q9BTV5 496 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 PLVAPQ9BX97 442 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 LRRCC1Q9C099 1032 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 IGFLR1Q9H665 355 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 ECHDC1Q9NTX5 307 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 MTMR7Q9Y216 660 aa8.32□□□□□ -1.08
LRRC28-203ENST00000447360 LCTP09848 1927 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 H0Y858 1186 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 LINC01565O15544 149 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 ZNF286BP0CG31 522 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 TOP1P11387 765 aaKnown RBP8.31□□□□□ -1.08
LRRC28-203ENST00000447360 HOXC8P31273 242 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 ICAM3P32942 547 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 GTF2F1P35269 517 aaKnown RBP eCLIP8.31□□□□□ -1.08
LRRC28-203ENST00000447360 VCPP55072 806 aaKnown RBP8.31□□□□□ -1.08
LRRC28-203ENST00000447360 HIC1Q14526 733 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 ASCL5Q7RTU5 278 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 EFHBQ8N7U6 833 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 ATP6V0A1Q93050 837 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 TMEM47Q9BQJ4 181 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 PHF7Q9BWX1 381 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-203ENST00000447360 GPCPD1Q9NPB8 672 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 TLR9Q9NR96 1032 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 CLEC1BQ9P126 229 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 TRPC6Q9Y210 931 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 MRVI1Q9Y6F6 885 aa8.31□□□□□ -1.08
LRRC28-203ENST00000447360 FRMPD2Q68DX3 1309 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-203ENST00000447360 ADGRA3Q8IWK6 1321 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 EPG5Q9HCE0 2579 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 ZFHX4Q86UP3 3567 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 ZNF292O60281 2723 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 C17orf102A2RUQ5 167 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 PRR23AA6NEV1 266 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 GALR2O43603 387 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-203ENST00000447360 ORC4O43929 436 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 RANBP6O60518 1105 aaKnown RBP8.3□□□□□ -1.08
LRRC28-203ENST00000447360 FGRP09769 529 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 PDHBP11177 359 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 MS4A1P11836 297 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 ATF7P17544 494 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-203ENST00000447360 NBL1P41271 181 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 ID4P47928 161 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 RRP1P56182 461 aaKnown RBP8.3□□□□□ -1.08
LRRC28-203ENST00000447360 CAMK1Q14012 370 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 NAALADL2Q58DX5 795 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 MYSM1Q5VVJ2 828 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 SMYD5Q6GMV2 418 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 KCNV1Q6PIU1 500 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 MCF2L2Q86YR7 1114 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 SYTL5Q8TDW5 730 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-203ENST00000447360 P2RX5Q93086 422 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 GPATCH3Q96I76 525 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 TAAR1Q96RJ0 339 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 RMDN3Q96TC7 470 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 C16orf70Q9BSU1 422 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 RC3H2Q9HBD1 1191 aaKnown RBP8.3□□□□□ -1.08
LRRC28-203ENST00000447360 INCENPQ9NQS7 918 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 ZBTB40Q9NUA8 1239 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 TCP11L1Q9NUJ3 509 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 ANAPC4Q9UJX5 808 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 RCAN3Q9UKA8 241 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 PLAGL2Q9UPG8 496 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 MICAL3Q7RTP6 2002 aa8.3□□□□□ -1.08
LRRC28-203ENST00000447360 DMXL1Q9Y485 3027 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 TREHO43280 583 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 SNHG28P0DPA3 235 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 TGFB3P10600 412 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 GNAT1P11488 350 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 ZNF543Q08ER8 600 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 PTPN21Q16825 1174 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 HSDL1Q3SXM5 330 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 USH1GQ495M9 461 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 CELF3Q5SZQ8 465 aaKnown RBP8.29□□□□□ -1.08
LRRC28-203ENST00000447360 GPATCH4Q5T3I0 446 aaKnown RBP8.29□□□□□ -1.08
LRRC28-203ENST00000447360 C20orf194Q5TEA3 1177 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 ARHGEF16Q5VV41 709 aa8.29□□□□□ -1.08
LRRC28-203ENST00000447360 ZNF689Q96CS4 500 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms