RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 TBCKQ8TEA7 893 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 CRYGNQ8WXF5 182 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 TMX3Q96JJ7 454 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 LLPHQ9BRT6 129 aaKnown RBP13.57□□□□□ -0.24
RFC4-208ENST00000447345 KCNH7Q9NS40 1196 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 GRIN2DO15399 1336 aa13.57□□□□□ -0.24
RFC4-208ENST00000447345 CCDC194A0A1B0GVG4 234 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 FAM205CA6NFA0 338 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 M0R2N6 131 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 ARVCFO00192 962 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 KRT2P35908 639 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 NR5A1Q13285 461 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 NONOQ15233 471 aaKnown RBP eCLIP13.56□□□□□ -0.24
RFC4-208ENST00000447345 INF2Q27J81 1249 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 PRR16Q569H4 304 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 C1orf53Q5VUE5 145 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 KRT40Q6A162 431 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 PIK3AP1Q6ZUJ8 805 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 KRT25Q7Z3Z0 450 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 TRIM50Q86XT4 487 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 AGO4Q9HCK5 861 aaKnown RBP13.56□□□□□ -0.24
RFC4-208ENST00000447345 BRMS1Q9HCU9 246 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 PDLIM7Q9NR12 457 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 SCN5AQ14524 2016 aa13.56□□□□□ -0.24
RFC4-208ENST00000447345 IGLV3-22A0A075B6J6 115 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 KPNA6O60684 536 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 TDP2O95551 362 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 MMP1P03956 469 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 CYP3A4P08684 503 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 CLTBP09497 229 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 MCM2P49736 904 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 HMGN5P82970 282 aaKnown RBP13.55□□□□□ -0.24
RFC4-208ENST00000447345 ITGB3BPQ13352 177 aaPredicted RBP13.55□□□□□ -0.24
RFC4-208ENST00000447345 NBPF20Q3BBV1 942 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 UTP14CQ5TAP6 766 aaKnown RBP13.55□□□□□ -0.24
RFC4-208ENST00000447345 SH3RF1Q7Z6J0 888 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 FAM126BQ8IXS8 530 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 FAM177A1Q8N128 213 aaPredicted RBP13.55□□□□□ -0.24
RFC4-208ENST00000447345 GIMAP8Q8ND71 665 aaPredicted RBP13.55□□□□□ -0.24
RFC4-208ENST00000447345 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 GPR20Q99678 358 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 SENP7Q9BQF6 1050 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 SDF4Q9BRK5 362 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 JPH1Q9HDC5 661 aaPredicted RBP13.55□□□□□ -0.24
RFC4-208ENST00000447345 PRKAG2Q9UGJ0 569 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 MROH7Q68CQ1 1323 aa13.55□□□□□ -0.24
RFC4-208ENST00000447345 DCDC2CA8MYV0 355 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 MEIS1O00470 390 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 TLR3O15455 904 aaKnown RBP13.54□□□□□ -0.24
RFC4-208ENST00000447345 B4GALT4O60513 344 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 F2P00734 622 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 LGALS2P05162 132 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 TCF7P36402 384 aaPredicted RBP13.54□□□□□ -0.24
RFC4-208ENST00000447345 PSEN2P49810 448 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 CDK7P50613 346 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 SETQ01105 290 aaPredicted RBP13.54□□□□□ -0.24
RFC4-208ENST00000447345 MFSD10Q14728 455 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 EARS2Q5JPH6 523 aaKnown RBP13.54□□□□□ -0.24
RFC4-208ENST00000447345 NIPA1Q7RTP0 329 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 ANKRD33Q7Z3H0 272 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 DIS3L2Q8IYB7 885 aaKnown RBP13.54□□□□□ -0.24
RFC4-208ENST00000447345 KAT2BQ92831 832 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 ZNF577Q9BSK1 485 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 TRPV6Q9H1D0 765 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 TRMT13Q9NUP7 481 aaKnown RBP13.54□□□□□ -0.24
RFC4-208ENST00000447345 TMEM39AQ9NV64 488 aa13.54□□□□□ -0.24
RFC4-208ENST00000447345 TRIM43BA6NCK2 446 aa13.53□□□□□ -0.24
RFC4-208ENST00000447345 BTBD18B2RXH4 712 aa13.53□□□□□ -0.24
RFC4-208ENST00000447345 MAFGO15525 162 aa13.53□□□□□ -0.24
RFC4-208ENST00000447345 EDIL3O43854 480 aa13.53□□□□□ -0.24
RFC4-208ENST00000447345 HOXD8P13378 290 aaPredicted RBP13.53□□□□□ -0.24
RFC4-208ENST00000447345 MDM2Q00987 491 aaPredicted RBP13.53□□□□□ -0.24
RFC4-208ENST00000447345 FAAP100Q0VG06 881 aa13.53□□□□□ -0.24
RFC4-208ENST00000447345 KIAA0753Q2KHM9 967 aa13.53□□□□□ -0.24
RFC4-208ENST00000447345 LETM2Q2VYF4 491 aa13.53□□□□□ -0.24
RFC4-208ENST00000447345 CHRDL2Q6WN34 429 aa13.53□□□□□ -0.24
RFC4-208ENST00000447345 SLC43A3Q8NBI5 491 aa13.53□□□□□ -0.24
RFC4-208ENST00000447345 GJA10Q969M2 543 aa13.53□□□□□ -0.24
RFC4-208ENST00000447345 TRIM43Q96BQ3 446 aaPredicted RBP13.53□□□□□ -0.24
RFC4-208ENST00000447345 KATNAL1Q9BW62 490 aa13.53□□□□□ -0.24
RFC4-208ENST00000447345 SLC9A2Q9UBY0 812 aa13.53□□□□□ -0.24
RFC4-208ENST00000447345 GSTTP1A0A1W2PQM5 241 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 IPO5O00410 1097 aaKnown RBP13.52□□□□□ -0.25
RFC4-208ENST00000447345 PPFIA4O75335 1185 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 MARK3P27448 753 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 GJB2P29033 226 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 CIITAP33076 1130 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 MAGEA10P43363 369 aaPredicted RBP13.52□□□□□ -0.25
RFC4-208ENST00000447345 USP11P51784 963 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 ACTR2P61160 394 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 SAFBQ15424 915 aaKnown RBP eCLIP13.52□□□□□ -0.25
RFC4-208ENST00000447345 NEK8Q86SG6 692 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 C7orf31Q8N865 590 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 IL27Q8NEV9 243 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 TNFRSF25Q93038 417 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 LENG9Q96B70 501 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 TOX2Q96NM4 488 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 C16orf70Q9BSU1 422 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 PPP1R12CQ9BZL4 782 aa13.52□□□□□ -0.25
RFC4-208ENST00000447345 NOD1Q9Y239 953 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms