RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CATSPERZQ9NTU4 200 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 SAMD15Q9P1V8 674 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 MYOTQ9UBF9 498 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 DSEQ9UL01 958 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 PCDHB4Q9Y5E5 795 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 PCDHA5Q9Y5H7 936 aa6.24□□□□□ -1.41
HMGB1P48-201ENST00000446155 TRAF5O00463 557 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 CLSTN1O94985 981 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 ASGR2P07307 311 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 MYCLP1P12525 358 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 PMLP29590 882 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 DNM2P50570 870 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 ZNF200P98182 395 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 TAF7LQ5H9L4 462 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 FSTL4Q6MZW2 842 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 MILR1Q7Z6M3 343 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 RNF180Q86T96 592 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 AMIGO3Q86WK7 504 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 LDHDQ86WU2 507 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 NOSTRINQ8IVI9 506 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 FAM126BQ8IXS8 530 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 PPM1KQ8N3J5 372 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 CISD2Q8N5K1 135 aaKnown RBP6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 ARRDC4Q8NCT1 418 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 CPA5Q8WXQ8 436 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 TMX1Q9H3N1 280 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 HSPBP1Q9NZL4 362 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 DBR1Q9UK59 544 aaKnown RBP6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 MAPRE3Q9UPY8 281 aa6.23□□□□□ -1.41
HMGB1P48-201ENST00000446155 M0R2C6 588 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 SLC27A2O14975 620 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 PDE8AO60658 829 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 MAFKO60675 156 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 STAT3P40763 770 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 ST5P78524 1137 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 TUSC3Q13454 348 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 PCBP1Q15365 356 aaKnown RBP eCLIP6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 SEPT7Q16181 437 aaKnown RBP6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 CRY1Q16526 586 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 PTPROQ16827 1216 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 CFAP100Q494V2 611 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 FIGNQ5HY92 759 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 PIK3R6Q5UE93 754 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 CNNM4Q6P4Q7 775 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 KCTD1Q719H9 257 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 PTRH1Q86Y79 214 aaKnown RBP6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 KIF18BQ86Y91 864 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 IGDCC3Q8IVU1 814 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 POU5F2Q8N7G0 328 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 CHST14Q8NCH0 376 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 CLEC4DQ8WXI8 215 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 ALG3Q92685 438 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 CD244Q9BZW8 370 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 RNF38Q9H0F5 515 aa6.22□□□□□ -1.41
HMGB1P48-201ENST00000446155 RAB11FIP3O75154 756 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 LTFP02788 710 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 APPP05067 770 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 MED14OSP0DP75 135 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 ZBTB48P10074 688 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 FLT3P36888 993 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 EPHB3P54753 998 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 DLG4P78352 724 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 CREB3L3Q68CJ9 461 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 OGFOD2Q6N063 350 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 PKN3Q6P5Z2 889 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 UBE2R2Q712K3 238 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 KRT26Q7Z3Y9 468 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 TRIM48Q8IWZ4 208 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 RBM12BQ8IXT5 1001 aaKnown RBP6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 MZB1Q8WU39 189 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 WNK4Q96J92 1243 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 POLR3GLQ9BT43 218 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 SGPP1Q9BX95 441 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 B4GALT6Q9UBX8 382 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 RNF114Q9Y508 228 aa6.21□□□□□ -1.42
HMGB1P48-201ENST00000446155 hCG_2014768A0A024R1R8 64 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 N4BP3O15049 544 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 MARCH6O60337 910 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 KPNA6O60684 536 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 EIF5BO60841 1220 aaKnown RBP6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 CLASP2O75122 1294 aaKnown RBP6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 C8BP07358 591 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 ATF2P15336 505 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 POU3F3P20264 500 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 GLDCP23378 1020 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 IGBP1P78318 339 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 DSG1Q02413 1049 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 CACNB2Q08289 660 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 SEC23AQ15436 765 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 CR1LQ2VPA4 569 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 DLG3Q92796 817 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 FAM84AQ96KN4 292 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 SIRT5Q9NXA8 310 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 DTLQ9NZJ0 730 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 NUB1Q9Y5A7 615 aa6.2□□□□□ -1.42
HMGB1P48-201ENST00000446155 FAM90A27PA6NNH2 459 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 ACOT7O00154 380 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 PAX4O43316 350 aa6.19□□□□□ -1.42
HMGB1P48-201ENST00000446155 FARP2O94887 1054 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms