RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 RTEL1Q9NZ71 1219 aa16.42■□□□□ 0.22
SMARCAL1-210ENST00000445153 C17orf102A2RUQ5 167 aa16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 RSPH10B2B2RC85 870 aa16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 SPATA31C2B4DYI2 1134 aa16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 LGALS2P05162 132 aa16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 RSPH10BP0C881 870 aa16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 SMIM10L2AP0DMW4 78 aa16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 SMIM10L2BP0DMW5 78 aa16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 TRDNQ13061 729 aa16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 WTAPQ15007 396 aa16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 INPP4AQ96PE3 977 aaPredicted RBP16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 TGS1Q96RS0 853 aaKnown RBP16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 C17orf80Q9BSJ5 609 aa16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 EPHX3Q9H6B9 360 aa16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 U3KPZ7 1027 aaPredicted RBP16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 FRMPD4Q14CM0 1322 aa16.41■□□□□ 0.22
SMARCAL1-210ENST00000445153 ICAM3P32942 547 aa16.4■□□□□ 0.22
SMARCAL1-210ENST00000445153 PLEKHG4Q58EX7 1191 aa16.4■□□□□ 0.22
SMARCAL1-210ENST00000445153 USP17L6PQ6QN14 398 aa16.4■□□□□ 0.22
SMARCAL1-210ENST00000445153 CYFIP1Q7L576 1253 aa16.4■□□□□ 0.22
SMARCAL1-210ENST00000445153 SKAP1Q86WV1 359 aa16.4■□□□□ 0.22
SMARCAL1-210ENST00000445153 MB21D2Q8IYB1 491 aaPredicted RBP16.4■□□□□ 0.22
SMARCAL1-210ENST00000445153 ATP6V0A1Q93050 837 aa16.4■□□□□ 0.22
SMARCAL1-210ENST00000445153 CD320Q9NPF0 282 aa16.4■□□□□ 0.22
SMARCAL1-210ENST00000445153 SETD4Q9NVD3 440 aa16.4■□□□□ 0.22
SMARCAL1-210ENST00000445153 LMCD1Q9NZU5 365 aa16.4■□□□□ 0.22
SMARCAL1-210ENST00000445153 SGSM2O43147 1006 aa16.39■□□□□ 0.21
SMARCAL1-210ENST00000445153 EFCAB14O75071 495 aa16.39■□□□□ 0.21
SMARCAL1-210ENST00000445153 HTRA4P83105 476 aaPredicted RBP16.39■□□□□ 0.21
SMARCAL1-210ENST00000445153 TRIM50Q86XT4 487 aa16.39■□□□□ 0.21
SMARCAL1-210ENST00000445153 MYOCDQ8IZQ8 938 aa16.39■□□□□ 0.21
SMARCAL1-210ENST00000445153 NCOA7Q8NI08 942 aa16.39■□□□□ 0.21
SMARCAL1-210ENST00000445153 GPR20Q99678 358 aa16.39■□□□□ 0.21
SMARCAL1-210ENST00000445153 MYL10Q9BUA6 226 aa16.39■□□□□ 0.21
SMARCAL1-210ENST00000445153 DOCK5Q9H7D0 1870 aa16.38■□□□□ 0.21
SMARCAL1-210ENST00000445153 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.38■□□□□ 0.21
SMARCAL1-210ENST00000445153 ERICH2A1L162 156 aa16.38■□□□□ 0.21
SMARCAL1-210ENST00000445153 MEIS2O14770 477 aa16.38■□□□□ 0.21
SMARCAL1-210ENST00000445153 CTSHP09668 335 aa16.38■□□□□ 0.21
SMARCAL1-210ENST00000445153 ADAM17P78536 824 aa16.38■□□□□ 0.21
SMARCAL1-210ENST00000445153 RALYLQ86SE5 291 aaKnown RBP16.38■□□□□ 0.21
SMARCAL1-210ENST00000445153 SP7Q8TDD2 431 aaPredicted RBP16.38■□□□□ 0.21
SMARCAL1-210ENST00000445153 MAP4K1Q92918 833 aa16.38■□□□□ 0.21
SMARCAL1-210ENST00000445153 INSL6Q9Y581 213 aa16.38■□□□□ 0.21
SMARCAL1-210ENST00000445153 EMSYQ7Z589 1322 aa16.38■□□□□ 0.21
SMARCAL1-210ENST00000445153 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.37■□□□□ 0.21
SMARCAL1-210ENST00000445153 AMHP03971 560 aa16.37■□□□□ 0.21
SMARCAL1-210ENST00000445153 TRAF1Q13077 416 aa16.37■□□□□ 0.21
SMARCAL1-210ENST00000445153 UTP14CQ5TAP6 766 aaKnown RBP16.37■□□□□ 0.21
SMARCAL1-210ENST00000445153 METTL7BQ6UX53 244 aa16.37■□□□□ 0.21
SMARCAL1-210ENST00000445153 CATIPQ7Z7H3 387 aa16.37■□□□□ 0.21
SMARCAL1-210ENST00000445153 RUFY2Q8WXA3 655 aa16.37■□□□□ 0.21
SMARCAL1-210ENST00000445153 USP26Q9BXU7 913 aa16.37■□□□□ 0.21
SMARCAL1-210ENST00000445153 LY9Q9HBG7 655 aa16.37■□□□□ 0.21
SMARCAL1-210ENST00000445153 BRWD1Q9NSI6 2320 aa16.37■□□□□ 0.21
SMARCAL1-210ENST00000445153 SIP14410 1827 aa16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 NOP56O00567 594 aaKnown RBP16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 FIBPO43427 364 aa16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 ATP9AO75110 1047 aa16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 PLEKHA8P1O95397 391 aa16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 SP4Q02446 784 aa16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 NEDD9Q14511 834 aa16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 GNPTABQ3T906 1256 aa16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 CMTR1Q8N1G2 835 aaKnown RBP16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 TOP1MTQ969P6 601 aa16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 SPZ1Q9BXG8 430 aa16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 UBE2ZQ9H832 354 aaPredicted RBP16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 MICAL3Q7RTP6 2002 aa16.36■□□□□ 0.21
SMARCAL1-210ENST00000445153 STAM2O75886 525 aa16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 UPP2O95045 317 aa16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 SART3Q15020 963 aaKnown RBP16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 EPC2Q52LR7 807 aa16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 PCNX4Q63HM2 1172 aa16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 ZNF654Q8IZM8 581 aa16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 SRBD1Q8N5C6 995 aaKnown RBP16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 FBXO22Q8NEZ5 403 aa16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 SMARCC2Q8TAQ2 1214 aa16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 LMBR1Q8WVP7 490 aa16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 SEPT8Q92599 483 aa16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 LRFN3Q9BTN0 628 aa16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 C1QTNF1Q9BXJ1 281 aa16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 RBM8AQ9Y5S9 174 aaKnown RBP16.35■□□□□ 0.21
SMARCAL1-210ENST00000445153 PIK3CDO00329 1044 aa16.34■□□□□ 0.21
SMARCAL1-210ENST00000445153 CHRNA1P02708 482 aa16.34■□□□□ 0.21
SMARCAL1-210ENST00000445153 RXRAP19793 462 aa16.34■□□□□ 0.21
SMARCAL1-210ENST00000445153 ARHGAP4P98171 946 aa16.34■□□□□ 0.21
SMARCAL1-210ENST00000445153 FAM26DQ5JW98 314 aa16.34■□□□□ 0.21
SMARCAL1-210ENST00000445153 RUFY4Q6ZNE9 571 aa16.34■□□□□ 0.21
SMARCAL1-210ENST00000445153 RAB11FIP4Q86YS3 637 aa16.34■□□□□ 0.21
SMARCAL1-210ENST00000445153 RRP36Q96EU6 259 aaKnown RBP16.34■□□□□ 0.21
SMARCAL1-210ENST00000445153 MAP3K14Q99558 947 aa16.34■□□□□ 0.21
SMARCAL1-210ENST00000445153 SENP7Q9BQF6 1050 aa16.34■□□□□ 0.21
SMARCAL1-210ENST00000445153 C11orf16Q9NQ32 467 aa16.34■□□□□ 0.21
SMARCAL1-210ENST00000445153 GSTTP1A0A1W2PQM5 241 aa16.33■□□□□ 0.2
SMARCAL1-210ENST00000445153 hCG_1642624A0A1W2PR95 340 aa16.33■□□□□ 0.2
SMARCAL1-210ENST00000445153 PRC1O43663 620 aa16.33■□□□□ 0.2
SMARCAL1-210ENST00000445153 CAND2O75155 1236 aa16.33■□□□□ 0.2
SMARCAL1-210ENST00000445153 ITGB5P18084 799 aa16.33■□□□□ 0.2
SMARCAL1-210ENST00000445153 SMARCA1P28370 1054 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms