RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 GJB5O95377 273 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 LGALS2P05162 132 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 RSPH10BP0C881 870 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 SMIM10L2AP0DMW4 78 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 SMIM10L2BP0DMW5 78 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 BMP1P13497 986 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 COL9A3Q14050 684 aaPredicted RBP17.82■□□□□ 0.44
SEC13-213ENST00000445064 CASC1Q6TDU7 716 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.82■□□□□ 0.44
SEC13-213ENST00000445064 CMTR1Q8N1G2 835 aaKnown RBP17.82■□□□□ 0.44
SEC13-213ENST00000445064 MAP3K14Q99558 947 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 RAD9AQ99638 391 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 SPZ1Q9BXG8 430 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 TELO2Q9Y4R8 837 aa17.82■□□□□ 0.44
SEC13-213ENST00000445064 FRMPD4Q14CM0 1322 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 MEIS2O14770 477 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 FIBPO43427 364 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 EFCAB14O75071 495 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 STAM2O75886 525 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 PLEKHA8P1O95397 391 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 KIF5BP33176 963 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 KCNQ1P51787 676 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 NEDD9Q14511 834 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 NFXL1Q6ZNB6 911 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 SRBD1Q8N5C6 995 aaKnown RBP17.81■□□□□ 0.44
SEC13-213ENST00000445064 CUL5Q93034 780 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 NECAB3Q96P71 396 aaPredicted RBP17.81■□□□□ 0.44
SEC13-213ENST00000445064 GPR20Q99678 358 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 USP26Q9BXU7 913 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 SETD4Q9NVD3 440 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 MTUS1Q9ULD2 1270 aa17.81■□□□□ 0.44
SEC13-213ENST00000445064 CCDC69A6NI79 296 aa17.8■□□□□ 0.44
SEC13-213ENST00000445064 DDAH1O94760 285 aa17.8■□□□□ 0.44
SEC13-213ENST00000445064 RXRAP19793 462 aa17.8■□□□□ 0.44
SEC13-213ENST00000445064 SMARCA1P28370 1054 aa17.8■□□□□ 0.44
SEC13-213ENST00000445064 SP4Q02446 784 aa17.8■□□□□ 0.44
SEC13-213ENST00000445064 AAK1Q2M2I8 961 aa17.8■□□□□ 0.44
SEC13-213ENST00000445064 UTP14CQ5TAP6 766 aaKnown RBP17.8■□□□□ 0.44
SEC13-213ENST00000445064 PCNX4Q63HM2 1172 aa17.8■□□□□ 0.44
SEC13-213ENST00000445064 METTL7BQ6UX53 244 aa17.8■□□□□ 0.44
SEC13-213ENST00000445064 TMTC2Q8N394 836 aa17.8■□□□□ 0.44
SEC13-213ENST00000445064 OSBPL7Q9BZF2 842 aa17.8■□□□□ 0.44
SEC13-213ENST00000445064 LSG1Q9H089 658 aaKnown RBP17.8■□□□□ 0.44
SEC13-213ENST00000445064 SEC63Q9UGP8 760 aaKnown RBP17.8■□□□□ 0.44
SEC13-213ENST00000445064 REV3LO60673 3130 aa17.79■□□□□ 0.44
SEC13-213ENST00000445064 EMSYQ7Z589 1322 aa17.79■□□□□ 0.44
SEC13-213ENST00000445064 TCF20Q9UGU0 1960 aaKnown RBP17.79■□□□□ 0.44
SEC13-213ENST00000445064 LINC01553A4QN01 128 aa17.79■□□□□ 0.44
SEC13-213ENST00000445064 SH2B2O14492 632 aaPredicted RBP17.79■□□□□ 0.44
SEC13-213ENST00000445064 HOXC8P31273 242 aa17.79■□□□□ 0.44
SEC13-213ENST00000445064 MCM5P33992 734 aa17.79■□□□□ 0.44
SEC13-213ENST00000445064 TRIM50Q86XT4 487 aa17.79■□□□□ 0.44
SEC13-213ENST00000445064 RAB11FIP4Q86YS3 637 aa17.79■□□□□ 0.44
SEC13-213ENST00000445064 GDPD5Q8WTR4 605 aa17.79■□□□□ 0.44
SEC13-213ENST00000445064 TMEM87BQ96K49 555 aa17.79■□□□□ 0.44
SEC13-213ENST00000445064 LZTS2Q9BRK4 669 aa17.79■□□□□ 0.44
SEC13-213ENST00000445064 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
SEC13-213ENST00000445064 SUGCTQ9HAC7 445 aa17.79■□□□□ 0.44
SEC13-213ENST00000445064 DOCK5Q9H7D0 1870 aa17.78■□□□□ 0.44
SEC13-213ENST00000445064 hCG_1642624A0A1W2PR95 340 aa17.78■□□□□ 0.44
SEC13-213ENST00000445064 PIK3CDO00329 1044 aa17.78■□□□□ 0.44
SEC13-213ENST00000445064 SLC27A2O14975 620 aa17.78■□□□□ 0.44
SEC13-213ENST00000445064 GNAQP50148 359 aa17.78■□□□□ 0.44
SEC13-213ENST00000445064 ERVK-21P61565 698 aa17.78■□□□□ 0.44
SEC13-213ENST00000445064 PLEKHG4Q58EX7 1191 aa17.78■□□□□ 0.44
SEC13-213ENST00000445064 NLRX1Q86UT6 975 aa17.78■□□□□ 0.44
SEC13-213ENST00000445064 CCDC82Q8N4S0 544 aa17.78■□□□□ 0.44
SEC13-213ENST00000445064 TGS1Q96RS0 853 aaKnown RBP17.78■□□□□ 0.44
SEC13-213ENST00000445064 COG5Q9UP83 839 aa17.78■□□□□ 0.44
SEC13-213ENST00000445064 PRRC2BQ5JSZ5 2229 aaKnown RBP17.78■□□□□ 0.44
SEC13-213ENST00000445064 ATP9AO75110 1047 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 AMHP03971 560 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 CTSHP09668 335 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 GNAT1P11488 350 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 MKRN4PQ13434 485 aaPredicted RBP17.77■□□□□ 0.44
SEC13-213ENST00000445064 NECTIN1Q15223 517 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 CREB3L3Q68CJ9 461 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 XRRA1Q6P2D8 792 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 MYOCDQ8IZQ8 938 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 HLA-CQ95604 372 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 SENP7Q9BQF6 1050 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 LRRC2Q9BYS8 371 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 PSTPIP2Q9H939 334 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 INSL6Q9Y581 213 aa17.77■□□□□ 0.44
SEC13-213ENST00000445064 LIFRP42702 1097 aa17.76■□□□□ 0.43
SEC13-213ENST00000445064 ADAM17P78536 824 aa17.76■□□□□ 0.43
SEC13-213ENST00000445064 ARHGAP4P98171 946 aa17.76■□□□□ 0.43
SEC13-213ENST00000445064 SEPT8Q92599 483 aa17.76■□□□□ 0.43
SEC13-213ENST00000445064 C17orf80Q9BSJ5 609 aa17.76■□□□□ 0.43
SEC13-213ENST00000445064 LMCD1Q9NZU5 365 aa17.76■□□□□ 0.43
SEC13-213ENST00000445064 ZNF215Q9UL58 517 aaPredicted RBP17.76■□□□□ 0.43
SEC13-213ENST00000445064 TRANK1O15050 2925 aa17.75■□□□□ 0.43
SEC13-213ENST00000445064 COL4A4P53420 1690 aaPredicted RBP17.75■□□□□ 0.43
SEC13-213ENST00000445064 UPP2O95045 317 aa17.75■□□□□ 0.43
SEC13-213ENST00000445064 CALM1P0DP23 149 aa17.75■□□□□ 0.43
SEC13-213ENST00000445064 CALM2P0DP24 149 aa17.75■□□□□ 0.43
SEC13-213ENST00000445064 CALM3P0DP25 149 aa17.75■□□□□ 0.43
SEC13-213ENST00000445064 TCF7P36402 384 aaPredicted RBP17.75■□□□□ 0.43
SEC13-213ENST00000445064 HTRA4P83105 476 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms