RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 C16orf70Q9BSU1 422 aa21.28■■□□□ 1
CCDC188-202ENST00000444532 TPCN1Q9ULQ1 816 aa21.28■■□□□ 1
CCDC188-202ENST00000444532 PFKFB2O60825 505 aa21.27■■□□□ 1
CCDC188-202ENST00000444532 ATP9AO75110 1047 aa21.27■■□□□ 1
CCDC188-202ENST00000444532 CDKL5O76039 1030 aa21.27■■□□□ 1
CCDC188-202ENST00000444532 KCNA2P16389 499 aa21.27■■□□□ 1
CCDC188-202ENST00000444532 EPHB4P54760 987 aa21.27■■□□□ 1
CCDC188-202ENST00000444532 AK2P54819 239 aa21.27■■□□□ 1
CCDC188-202ENST00000444532 C8orf34Q49A92 452 aa21.27■■□□□ 1
CCDC188-202ENST00000444532 CEP55Q53EZ4 464 aa21.27■■□□□ 1
CCDC188-202ENST00000444532 C9orf50Q5SZB4 431 aa21.27■■□□□ 1
CCDC188-202ENST00000444532 JAKMIP3Q5VZ66 844 aa21.27■■□□□ 1
CCDC188-202ENST00000444532 FAM177A1Q8N128 213 aaPredicted RBP21.27■■□□□ 1
CCDC188-202ENST00000444532 PPP1R13LQ8WUF5 828 aa21.27■■□□□ 1
CCDC188-202ENST00000444532 ALG1Q9BT22 464 aa21.27■■□□□ 1
CCDC188-202ENST00000444532 H3BRB1 525 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 SOX1O00570 391 aaPredicted RBP21.26■□□□□ 0.99
CCDC188-202ENST00000444532 CYP3A4P08684 503 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 CYP2C9P11712 490 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 CSF2RAP15509 400 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 NEK4P51957 841 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 ARHGAP4P98171 946 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 SCRN1Q12765 414 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 PTGISQ16647 500 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 NIPA1Q7RTP0 329 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 TUT1Q9H6E5 874 aaKnown RBP21.26■□□□□ 0.99
CCDC188-202ENST00000444532 KCNH7Q9NS40 1196 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 VPS54Q9P1Q0 977 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 HDAC6Q9UBN7 1215 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 GTF2IRD1Q9UHL9 959 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 NOD1Q9Y239 953 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 UMODL1Q5DID0 1318 aa21.26■□□□□ 0.99
CCDC188-202ENST00000444532 MEIS1O00470 390 aa21.25■□□□□ 0.99
CCDC188-202ENST00000444532 LGALS2P05162 132 aa21.25■□□□□ 0.99
CCDC188-202ENST00000444532 ZNF76P36508 570 aa21.25■□□□□ 0.99
CCDC188-202ENST00000444532 GDF6Q6KF10 455 aaPredicted RBP21.25■□□□□ 0.99
CCDC188-202ENST00000444532 GPR153Q6NV75 609 aa21.25■□□□□ 0.99
CCDC188-202ENST00000444532 CYP2W1Q8TAV3 490 aa21.25■□□□□ 0.99
CCDC188-202ENST00000444532 CRYGNQ8WXF5 182 aa21.25■□□□□ 0.99
CCDC188-202ENST00000444532 PITPNM1O00562 1244 aa21.24■□□□□ 0.99
CCDC188-202ENST00000444532 ADAMTS3O15072 1205 aa21.24■□□□□ 0.99
CCDC188-202ENST00000444532 NLRP5P59047 1200 aa21.24■□□□□ 0.99
CCDC188-202ENST00000444532 BFSP2Q13515 415 aa21.24■□□□□ 0.99
CCDC188-202ENST00000444532 SEPT1Q8WYJ6 367 aa21.24■□□□□ 0.99
CCDC188-202ENST00000444532 LRCH3Q96II8 777 aa21.24■□□□□ 0.99
CCDC188-202ENST00000444532 IL23AQ9NPF7 189 aa21.24■□□□□ 0.99
CCDC188-202ENST00000444532 CCL23P55773 120 aa21.23■□□□□ 0.99
CCDC188-202ENST00000444532 TMEM240Q5SV17 173 aa21.23■□□□□ 0.99
CCDC188-202ENST00000444532 C16orf59Q7L2K0 433 aa21.23■□□□□ 0.99
CCDC188-202ENST00000444532 RPUSD2Q8IZ73 545 aaKnown RBP21.23■□□□□ 0.99
CCDC188-202ENST00000444532 CCDC155Q8N6L0 562 aa21.23■□□□□ 0.99
CCDC188-202ENST00000444532 RETREG2Q8NC44 543 aa21.23■□□□□ 0.99
CCDC188-202ENST00000444532 WNT8AQ9H1J5 351 aa21.23■□□□□ 0.99
CCDC188-202ENST00000444532 ZNF215Q9UL58 517 aaPredicted RBP21.23■□□□□ 0.99
CCDC188-202ENST00000444532 NFASCO94856 1347 aa21.23■□□□□ 0.99
CCDC188-202ENST00000444532 ARP10275 920 aa21.22■□□□□ 0.99
CCDC188-202ENST00000444532 SP4Q02446 784 aa21.22■□□□□ 0.99
CCDC188-202ENST00000444532 GALNT17Q6IS24 598 aa21.22■□□□□ 0.99
CCDC188-202ENST00000444532 PSRC1Q6PGN9 363 aaPredicted RBP21.22■□□□□ 0.99
CCDC188-202ENST00000444532 CAGE1Q8TC20 777 aa21.22■□□□□ 0.99
CCDC188-202ENST00000444532 RNPC3Q96LT9 517 aaKnown RBP21.22■□□□□ 0.99
CCDC188-202ENST00000444532 CTAGE1Q96RT6 745 aa21.22■□□□□ 0.99
CCDC188-202ENST00000444532 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.22■□□□□ 0.99
CCDC188-202ENST00000444532 SDF4Q9BRK5 362 aa21.22■□□□□ 0.99
CCDC188-202ENST00000444532 AGO4Q9HCK5 861 aaKnown RBP21.22■□□□□ 0.99
CCDC188-202ENST00000444532 PKD2L1Q9P0L9 805 aa21.22■□□□□ 0.99
CCDC188-202ENST00000444532 PCDHA4Q9UN74 947 aa21.22■□□□□ 0.99
CCDC188-202ENST00000444532 TELO2Q9Y4R8 837 aa21.22■□□□□ 0.99
CCDC188-202ENST00000444532 STK36Q9NRP7 1315 aa21.22■□□□□ 0.99
CCDC188-202ENST00000444532 GSTTP1A0A1W2PQM5 241 aa21.21■□□□□ 0.99
CCDC188-202ENST00000444532 FAM86B1E9PN63 330 aa21.21■□□□□ 0.99
CCDC188-202ENST00000444532 FAM86B2P0C5J1 330 aa21.21■□□□□ 0.99
CCDC188-202ENST00000444532 ACRP10323 421 aa21.21■□□□□ 0.99
CCDC188-202ENST00000444532 TCF7P36402 384 aaPredicted RBP21.21■□□□□ 0.99
CCDC188-202ENST00000444532 PTK7Q13308 1070 aa21.21■□□□□ 0.99
CCDC188-202ENST00000444532 ME3Q16798 604 aa21.21■□□□□ 0.99
CCDC188-202ENST00000444532 UTP14CQ5TAP6 766 aaKnown RBP21.21■□□□□ 0.99
CCDC188-202ENST00000444532 C22orf23Q9BZE7 217 aa21.21■□□□□ 0.99
CCDC188-202ENST00000444532 JPH1Q9HDC5 661 aaPredicted RBP21.21■□□□□ 0.99
CCDC188-202ENST00000444532 SLC9A2Q9UBY0 812 aa21.21■□□□□ 0.99
CCDC188-202ENST00000444532 IGLV3-22A0A075B6J6 115 aa21.2■□□□□ 0.98
CCDC188-202ENST00000444532 IQCF3P0C7M6 154 aa21.2■□□□□ 0.98
CCDC188-202ENST00000444532 XBP1P17861 261 aa21.2■□□□□ 0.98
CCDC188-202ENST00000444532 HOXC8P31273 242 aa21.2■□□□□ 0.98
CCDC188-202ENST00000444532 RFC2P35250 354 aa21.2■□□□□ 0.98
CCDC188-202ENST00000444532 USP11P51784 963 aa21.2■□□□□ 0.98
CCDC188-202ENST00000444532 ZNF365Q70YC5 407 aa21.2■□□□□ 0.98
CCDC188-202ENST00000444532 PLA2G4DQ86XP0 818 aa21.2■□□□□ 0.98
CCDC188-202ENST00000444532 BLIDQ8IZY5 108 aa21.2■□□□□ 0.98
CCDC188-202ENST00000444532 DAGLBQ8NCG7 672 aa21.2■□□□□ 0.98
CCDC188-202ENST00000444532 RASGRP4Q8TDF6 673 aa21.2■□□□□ 0.98
CCDC188-202ENST00000444532 SCLYQ96I15 445 aa21.2■□□□□ 0.98
CCDC188-202ENST00000444532 TRIP12Q14669 1992 aaPredicted RBP21.19■□□□□ 0.98
CCDC188-202ENST00000444532 C17orf102A2RUQ5 167 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 CTDNEP1O95476 244 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 FGBP02675 491 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 PFKMP08237 780 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 SMIM10L2AP0DMW4 78 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 SMIM10L2BP0DMW5 78 aa21.19■□□□□ 0.98
CCDC188-202ENST00000444532 GNAT1P11488 350 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms