RNA–Protein interactions for RNA: ENST00000444476.1

LINC00475-208, long intergenic non-protein coding RNA 475, human

TSL 3

Gene LINC00475, Length 456 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00475-208	ENST00000444476	CALM1	P0DP23	149 aa		12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	CALM2	P0DP24	149 aa		12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	CALM3	P0DP25	149 aa		12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	KIF5B	P33176	963 aa		12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	GJA8	P48165	433 aa		12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	SOX10	P56693	466 aa		12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	ANTXR2	P58335	489 aa		12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	TTBK2	Q6IQ55	1244 aa		12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	DHX32	Q7L7V1	743 aa	Known RBP	12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	PAK6	Q9NQU5	681 aa	Predicted RBP	12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	RNF146	Q9NTX7	359 aa		12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	RIPK3	Q9Y572	518 aa		12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	ZNF536	O15090	1300 aa		12.83	□□□□□ -0.36
LINC00475-208	ENST00000444476	DNAJC25-GNG10	A0A024R161	153 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	CCDC69	A6NI79	296 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	IGHA2	P01877	340 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	ITGB2	P05107	769 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	PSMA5	P28066	241 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	SMARCA1	P28370	1054 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	SLC16A2	P36021	539 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	GNAQ	P50148	359 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	TROAP	Q12815	778 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	GRM4	Q14833	912 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	MTFR1	Q15390	333 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	CCDC174	Q6PII3	467 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	RASGRP2	Q7LDG7	609 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	ANKRD35	Q8N283	1001 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	MAML3	Q96JK9	1138 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	LY9	Q9HBG7	655 aa		12.82	□□□□□ -0.36
LINC00475-208	ENST00000444476	PLXNA1	Q9UIW2	1896 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	LOC102724159	A0A0B4J2E5	919 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	PALM3	A6NDB9	673 aa	Predicted RBP	12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	KLRF2	D3W0D1	207 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	SH2B2	O14492	632 aa	Predicted RBP	12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	DHX16	O60231	1041 aa	Known RBP	12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	COBL	O75128	1261 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	GOLGA8H	P0CJ92	632 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	ALAS1	P13196	640 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	RCAN1	P53805	252 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	CENPC	Q03188	943 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	PWP2	Q15269	919 aa	Known RBP	12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	ZNF792	Q3KQV3	632 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	GNAS	Q5JWF2	1037 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	SYNE3	Q6ZMZ3	975 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	NFXL1	Q6ZNB6	911 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	CHST3	Q7LGC8	479 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	SGMS1	Q86VZ5	419 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	ADGRF4	Q8IZF3	695 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	ZNF654	Q8IZM8	581 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	PGBD3	Q8N328	593 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	CTCFL	Q8NI51	663 aa	Predicted RBP	12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	NPLOC4	Q8TAT6	608 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	CHMP4C	Q96CF2	233 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	LZTS2	Q9BRK4	669 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	SLC12A7	Q9Y666	1083 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	SYNGAP1	Q96PV0	1343 aa		12.81	□□□□□ -0.36
LINC00475-208	ENST00000444476	SGPL1	O95470	568 aa		12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	MLLT1	Q03111	559 aa	Predicted RBP	12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	CACNB2	Q08289	660 aa	Predicted RBP	12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	CDC37	Q16543	378 aa	Predicted RBP	12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	CCL14	Q16627	93 aa		12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	MAMDC4	Q6UXC1	1216 aa		12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	RGS22	Q8NE09	1264 aa		12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	U2AF1L4	Q8WU68	220 aa	Known RBP	12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	TINF2	Q9BSI4	451 aa		12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	GPAM	Q9HCL2	828 aa		12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	A1CF	Q9NQ94	594 aa	Known RBP	12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	HOMER2	Q9NSB8	354 aa		12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	MAD2L2	Q9UI95	211 aa		12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	ABCB11	O95342	1321 aa		12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	MYH6	P13533	1939 aa		12.8	□□□□□ -0.36
LINC00475-208	ENST00000444476	BRCA2	P51587	3418 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	PIK3R2	O00459	728 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	PGK2	P07205	417 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	EXOSC10	Q01780	885 aa	Known RBP	12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	PPP2R5B	Q15173	497 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	BLOC1S2	Q6QNY1	142 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	MCF2L2	Q86YR7	1114 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	FBXL16	Q8N461	479 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	SAMD3	Q8N6K7	520 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	BANK1	Q8NDB2	785 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	MTMR8	Q96EF0	704 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	DEFB118	Q96PH6	123 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	MPHOSPH6	Q99547	160 aa	Known RBP	12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	USP26	Q9BXU7	913 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	UBA5	Q9GZZ9	404 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	RIOX1	Q9H6W3	641 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	RAB6B	Q9NRW1	208 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	FLRT1	Q9NZU1	646 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	ADD3	Q9UEY8	706 aa	Known RBP	12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	CNPY2	Q9Y2B0	182 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	SNX14	Q9Y5W7	946 aa		12.79	□□□□□ -0.36
LINC00475-208	ENST00000444476	PDE4DIP	Q5VU43	2346 aa		12.78	□□□□□ -0.36
LINC00475-208	ENST00000444476	ASB14	A6NK59	587 aa		12.78	□□□□□ -0.36
LINC00475-208	ENST00000444476		B4DLN1	442 aa		12.78	□□□□□ -0.36
LINC00475-208	ENST00000444476	ZBTB5	O15062	677 aa		12.78	□□□□□ -0.36
LINC00475-208	ENST00000444476	CYBA	P13498	195 aa		12.78	□□□□□ -0.36
LINC00475-208	ENST00000444476	EN2	P19622	333 aa	Predicted RBP	12.78	□□□□□ -0.36
LINC00475-208	ENST00000444476	CYP2C19	P33261	490 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms