RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 RFX6Q8HWS3 928 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 PIGSQ96S52 555 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 PIDD1Q9HB75 910 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 TROVE2P10155 538 aaKnown RBP eCLIP12.18□□□□□ -0.46
FN1-211ENST00000443816 NUDT18Q6ZVK8 323 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 CATSPER4Q7RTX7 472 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 SH3RF3Q8TEJ3 882 aaPredicted RBP12.18□□□□□ -0.46
FN1-211ENST00000443816 ARHGEF2Q92974 986 aaKnown RBP12.18□□□□□ -0.46
FN1-211ENST00000443816 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.18□□□□□ -0.46
FN1-211ENST00000443816 HPCAL4Q9UM19 191 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 ZNF148Q9UQR1 794 aa12.18□□□□□ -0.46
FN1-211ENST00000443816 FKBP3Q00688 224 aaKnown RBP12.17□□□□□ -0.46
FN1-211ENST00000443816 TWF2Q6IBS0 349 aaKnown RBP12.17□□□□□ -0.46
FN1-211ENST00000443816 HERC5Q9UII4 1024 aaKnown RBP12.17□□□□□ -0.46
FN1-211ENST00000443816 RGS12O14924 1447 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 RGS16O15492 202 aaPredicted RBP12.17□□□□□ -0.46
FN1-211ENST00000443816 TSPY1Q01534 308 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 NXNQ6DKJ4 435 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 KCTD6Q8NC69 237 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 TSC1Q92574 1164 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 ABCA6Q8N139 1617 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 MAPK4P31152 587 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 GSDMAQ96QA5 445 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 EIF2AK2P19525 551 aaKnown RBP12.17□□□□□ -0.46
FN1-211ENST00000443816 IQCB1Q15051 598 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 MCPH1Q8NEM0 835 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 PASKQ96RG2 1323 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 PREX1Q8TCU6 1659 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 PPFIA4O75335 1185 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 IRX4P78413 519 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 MAP3K21Q5TCX8 1036 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 ANKRD20A3Q5VUR7 823 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 SP8Q8IXZ3 490 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 CCDC13Q8IYE1 715 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 TTLL11Q8NHH1 800 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 MAP4K1Q92918 833 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 HAUS8Q9BT25 410 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 GCNT4Q9P109 453 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 NXF1Q9UBU9 619 aaKnown RBP12.17□□□□□ -0.46
FN1-211ENST00000443816 DIXDC1Q155Q3 683 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 ARHGEF1Q92888 912 aaKnown RBP12.17□□□□□ -0.46
FN1-211ENST00000443816 FAM49AQ9H0Q0 323 aaPredicted RBP12.17□□□□□ -0.46
FN1-211ENST00000443816 PRDM10Q9NQV6 1147 aa12.17□□□□□ -0.46
FN1-211ENST00000443816 PRPF3O43395 683 aaKnown RBP12.16□□□□□ -0.46
FN1-211ENST00000443816 NFX1Q12986 1120 aaKnown RBP12.16□□□□□ -0.46
FN1-211ENST00000443816 HVCN1Q96D96 273 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 HEXIM2Q96MH2 286 aaKnown RBP12.16□□□□□ -0.46
FN1-211ENST00000443816 BRIP1Q9BX63 1249 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 DDX41Q9UJV9 622 aaKnown RBP12.16□□□□□ -0.46
FN1-211ENST00000443816 BAG5Q9UL15 447 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 MAD1L1Q9Y6D9 718 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.16□□□□□ -0.462e-7■■■■□ 25.7
FN1-211ENST00000443816 SPATA31E1Q6ZUB1 1445 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 RECQLP46063 649 aaPredicted RBP12.16□□□□□ -0.46
FN1-211ENST00000443816 MMP1P03956 469 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 ZSWIM5Q9P217 1185 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 HYOU1Q9Y4L1 999 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 NDUFA8P51970 172 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 MAPK6Q16659 721 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 FAM83BQ5T0W9 1011 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 PRPF38AQ8NAV1 312 aaKnown RBP12.16□□□□□ -0.46
FN1-211ENST00000443816 CCHCR1Q8TD31 782 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 TUBGCP2Q9BSJ2 902 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 MSTO1Q9BUK6 570 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 KIAA1586Q9HCI6 787 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 USH1CQ9Y6N9 552 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 DPYSL4O14531 572 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 H2AFZP0C0S5 128 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 H2AFVQ71UI9 128 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 PLA2G4BP0C869 781 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 EEF1GP26641 437 aaKnown RBP12.16□□□□□ -0.46
FN1-211ENST00000443816 ADKP55263 362 aaKnown RBP12.16□□□□□ -0.46
FN1-211ENST00000443816 SNRNP48Q6IEG0 339 aaKnown RBP12.16□□□□□ -0.46
FN1-211ENST00000443816 TTC25Q96NG3 672 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 C2orf40Q9H1Z8 148 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 CD209Q9NNX6 404 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 MAP3K20Q9NYL2 800 aaKnown RBP12.16□□□□□ -0.46
FN1-211ENST00000443816 KIAA1210Q9ULL0 1709 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 ABCB11O95342 1321 aa12.16□□□□□ -0.46
FN1-211ENST00000443816 SAT1P21673 171 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 HOXA13P31271 388 aaPredicted RBP12.15□□□□□ -0.46
FN1-211ENST00000443816 EPHB1P54762 984 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 HLFQ16534 295 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 ZNF658Q5TYW1 1059 aaPredicted RBP12.15□□□□□ -0.46
FN1-211ENST00000443816 DNAJC24Q6P3W2 148 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 NSUN6Q8TEA1 469 aaKnown RBP12.15□□□□□ -0.46
FN1-211ENST00000443816 TDRD3Q9H7E2 651 aaKnown RBP12.15□□□□□ -0.46
FN1-211ENST00000443816 HOMER3Q9NSC5 361 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 NNMTP40261 264 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 ATP6V0A4Q9HBG4 840 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 CPDO75976 1380 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 UTYO14607 1347 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 CPSF1Q10570 1443 aaKnown RBP12.15□□□□□ -0.46
FN1-211ENST00000443816 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 KBTBD13C9JR72 458 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 RASGRF1Q13972 1273 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 LONRF3Q496Y0 759 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 PHLDB2Q86SQ0 1253 aa12.15□□□□□ -0.46
FN1-211ENST00000443816 TTC30AQ86WT1 665 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms