RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 C12orf60Q5U649 245 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 CDC42EP5Q6NZY7 148 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 HS2ST1Q7LGA3 356 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 IQCA1Q86XH1 822 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 TMTC2Q8N394 836 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 SH3RF3Q8TEJ3 882 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 TGFBRAP1Q8WUH2 860 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 SDR42E1Q8WUS8 393 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 ESR2Q92731 530 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 ZBED3Q96IU2 234 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 TMEM87BQ96K49 555 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 JAKMIP1Q96N16 626 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 KIF2CQ99661 725 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 OSBPL5Q9H0X9 879 aaPredicted RBP8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 MYOZ2Q9NPC6 264 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 METTL5Q9NRN9 209 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 USP40Q9NVE5 1235 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 MCM9Q9NXL9 1143 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 GPRC5DQ9NZD1 345 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 GGT7Q9UJ14 662 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 MKL2Q9ULH7 1088 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 PPP2R3BQ9Y5P8 575 aa8.35□□□□□ -1.07
R3HDM1-210ENST00000443537 ERICH2A1L162 156 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 E7EWF7 191 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 SOX1O00570 391 aaPredicted RBP8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 FSCN2O14926 492 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 WDHD1O75717 1129 aaPredicted RBP8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 B3GALT4O96024 378 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 RPS6KB1P23443 525 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 GMPSP49915 693 aaPredicted RBP8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 NEK4P51957 841 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 RCAN1P53805 252 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 DYNLL1P63167 89 aaKnown RBP8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 FANCCQ00597 558 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 GSTM4Q03013 218 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 CTR9Q6PD62 1173 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 SV2BQ7L1I2 683 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 APOBEC3FQ8IUX4 373 aaKnown RBP8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 ZSCAN31Q96LW9 406 aaPredicted RBP8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 KCNQ5Q9NR82 932 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 PI4KBQ9UBF8 816 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 HERC5Q9UII4 1024 aaKnown RBP8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 SERPINB13Q9UIV8 391 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 PALD1Q9ULE6 856 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 GREB1LQ9C091 1923 aaPredicted RBP8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 PLIN4Q96Q06 1357 aa8.34□□□□□ -1.07
R3HDM1-210ENST00000443537 POLR2AP24928 1970 aaKnown RBP8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 ZNF541Q9H0D2 1346 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 MYH4Q9Y623 1939 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 GLTPD2A6NH11 291 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 SPDYE3A6NKU9 549 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 K7ELQ4 463 aaPredicted RBP8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 WNT10BO00744 389 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 GNB5O14775 395 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 PRKAB2O43741 272 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 CELA3AP09093 270 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 RAC1P63000 192 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 C19orf57Q0VDD7 668 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 PPP2R5BQ15173 497 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 KIF4BQ2VIQ3 1234 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 C16orf86Q6ZW13 317 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 METTL16Q86W50 562 aaKnown RBP8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 FOXP4Q8IVH2 680 aaPredicted RBP8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 FAM151AQ8WW52 585 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 CCDC17Q96LX7 622 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 IPO9Q96P70 1041 aaKnown RBP8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 NECAB3Q96P71 396 aaPredicted RBP8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 PLVAPQ9BX97 442 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 AGXT2Q9BYV1 514 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 ADARB2Q9NS39 739 aaKnown RBP8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 GINM1Q9NU53 330 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 PDRG1Q9NUG6 133 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 CNOT7Q9UIV1 285 aaKnown RBP8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 SAMM50Q9Y512 469 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 SIPA1L1O43166 1804 aa8.33□□□□□ -1.08
R3HDM1-210ENST00000443537 ATAD5Q96QE3 1844 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 MINDY4BA8MYZ0 360 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 HOXB4P17483 251 aaPredicted RBP8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 LIFRP42702 1097 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 PRELPP51888 382 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 EVCP57679 992 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 COL9A3Q14050 684 aaPredicted RBP8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 USP50Q70EL3 339 aaPredicted RBP8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 PNMA8AQ86V59 439 aaPredicted RBP8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 MAP4K3Q8IVH8 894 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 MB21D2Q8IYB1 491 aaPredicted RBP8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 WNT8BQ93098 351 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 INTS4Q96HW7 963 aaKnown RBP8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 PRMT6Q96LA8 375 aaPredicted RBP8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 TTC14Q96N46 770 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 UBAC1Q9BSL1 405 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 NOC4LQ9BVI4 516 aaKnown RBP8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 MXD3Q9BW11 206 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 ZNF70Q9UC06 446 aaPredicted RBP8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 SYNPO2Q9UMS6 1093 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 ANGEL1Q9UNK9 670 aaKnown RBP8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 LIMCH1Q9UPQ0 1083 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 MYH6P13533 1939 aa8.32□□□□□ -1.08
R3HDM1-210ENST00000443537 ENC1O14682 589 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms