RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 SPA17Q15506 151 aa16.68■□□□□ 0.26
CHFR-204ENST00000443047 SBK1Q52WX2 424 aa16.68■□□□□ 0.26
CHFR-204ENST00000443047 BZW1Q7L1Q6 419 aaKnown RBP16.68■□□□□ 0.26
CHFR-204ENST00000443047 IFT20Q8IY31 132 aa16.68■□□□□ 0.26
CHFR-204ENST00000443047 ELOA2Q8IYF1 753 aaPredicted RBP16.68■□□□□ 0.26
CHFR-204ENST00000443047 CUL5Q93034 780 aa16.68■□□□□ 0.26
CHFR-204ENST00000443047 SPAG5Q96R06 1193 aa16.68■□□□□ 0.26
CHFR-204ENST00000443047 PAGR1Q9BTK6 254 aa16.68■□□□□ 0.26
CHFR-204ENST00000443047 NUP58Q9BVL2 599 aa16.68■□□□□ 0.26
CHFR-204ENST00000443047 POLLQ9UGP5 575 aa16.68■□□□□ 0.26
CHFR-204ENST00000443047 ANO9A1A5B4 782 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 C6orf229H3BNL8 230 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 SLURP2P0DP57 97 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 SSR1P43307 286 aaKnown RBP16.67■□□□□ 0.26
CHFR-204ENST00000443047 ELF3P78545 371 aaPredicted RBP16.67■□□□□ 0.26
CHFR-204ENST00000443047 PAK1Q13153 545 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 PPP2R5BQ15173 497 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 RBBP5Q15291 538 aaKnown RBP16.67■□□□□ 0.26
CHFR-204ENST00000443047 ZNF804AQ7Z570 1209 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 TBC1D1Q86TI0 1168 aaPredicted RBP16.67■□□□□ 0.26
CHFR-204ENST00000443047 SLC39A2Q9NP94 309 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 CYTH3O43739 400 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 PLEKP08567 350 aaPredicted RBP16.67■□□□□ 0.26
CHFR-204ENST00000443047 MB21D1Q8N884 522 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 PLIN2Q99541 437 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 MXD3Q9BW11 206 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 TRPC6Q9Y210 931 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 COL24A1Q17RW2 1714 aa16.67■□□□□ 0.26
CHFR-204ENST00000443047 PFKFB3Q16875 520 aaPredicted RBP16.66■□□□□ 0.26
CHFR-204ENST00000443047 CAVIN3Q969G5 261 aa16.66■□□□□ 0.26
CHFR-204ENST00000443047 CCDC42Q96M95 316 aa16.66■□□□□ 0.26
CHFR-204ENST00000443047 GSDMAQ96QA5 445 aa16.66■□□□□ 0.26
CHFR-204ENST00000443047 FAM167BQ9BTA0 163 aa16.66■□□□□ 0.26
CHFR-204ENST00000443047 RTFDC1Q9BY42 306 aaPredicted RBP16.66■□□□□ 0.26
CHFR-204ENST00000443047 VAT1LQ9HCJ6 419 aa16.66■□□□□ 0.26
CHFR-204ENST00000443047 GDAQ9Y2T3 454 aa16.66■□□□□ 0.26
CHFR-204ENST00000443047 PARP1P09874 1014 aaKnown RBP16.66■□□□□ 0.26
CHFR-204ENST00000443047 SPAG1Q07617 926 aa16.66■□□□□ 0.26
CHFR-204ENST00000443047 IFFO1Q0D2I5 559 aa16.66■□□□□ 0.26
CHFR-204ENST00000443047 MFSD14BQ5SR56 506 aa16.66■□□□□ 0.26
CHFR-204ENST00000443047 ZNF444Q8N0Y2 327 aaPredicted RBP16.66■□□□□ 0.26
CHFR-204ENST00000443047 LRRC10BA6NIK2 292 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 PP2D1A8MPX8 630 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 B4DLN1 442 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 HEATR3Q7Z4Q2 680 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 CLEC10AQ8IUN9 316 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 ZNF579Q8NAF0 562 aaKnown RBP16.65■□□□□ 0.26
CHFR-204ENST00000443047 PIK3R5Q8WYR1 880 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 HOOK2Q96ED9 719 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 MAD2L2Q9UI95 211 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 PDS5AQ29RF7 1337 aaKnown RBP16.65■□□□□ 0.26
CHFR-204ENST00000443047 DIAPH2O60879 1101 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 PCP11498 1178 aaKnown RBP16.65■□□□□ 0.26
CHFR-204ENST00000443047 PICALMQ13492 652 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 PROCA1Q8NCQ7 364 aaPredicted RBP16.65■□□□□ 0.26
CHFR-204ENST00000443047 TRIM58Q8NG06 486 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 MAGEC3Q8TD91 643 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 TMEM47Q9BQJ4 181 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 TAF1LQ8IZX4 1826 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 HMGB1P1B2RPK0 211 aaPredicted RBP16.65■□□□□ 0.26
CHFR-204ENST00000443047 GCOM1H8Y6P7 765 aaPredicted RBP16.65■□□□□ 0.26
CHFR-204ENST00000443047 BUB1O43683 1085 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 MGRN1O60291 552 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 BAG3O95817 575 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 MYZAPP0CAP1 466 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 HSPA1LP34931 641 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 PSMD2Q13200 908 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 GKAP1Q5VSY0 366 aaPredicted RBP16.65■□□□□ 0.26
CHFR-204ENST00000443047 MAEAQ7L5Y9 396 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 MAB21L3Q8N8X9 362 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 DNAJC7Q99615 494 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 GGA1Q9UJY5 639 aa16.65■□□□□ 0.26
CHFR-204ENST00000443047 USO1O60763 962 aaKnown RBP16.64■□□□□ 0.25
CHFR-204ENST00000443047 SNUPNO95149 360 aaKnown RBP16.64■□□□□ 0.25
CHFR-204ENST00000443047 RASA1P20936 1047 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 EIF6P56537 245 aaKnown RBP16.64■□□□□ 0.25
CHFR-204ENST00000443047 RWDD2BP57060 319 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 PAK2Q13177 524 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 XRCC4Q13426 336 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 USP17L2Q6R6M4 530 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 KRT12Q99456 494 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 IFIH1Q9BYX4 1025 aaKnown RBP16.64■□□□□ 0.25
CHFR-204ENST00000443047 ZNF831Q5JPB2 1677 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 KIAA1551Q9HCM1 1747 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 MYH8P13535 1937 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 SBF2Q86WG5 1849 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 RBM5P52756 815 aaKnown RBP eCLIP16.64■□□□□ 0.25
CHFR-204ENST00000443047 FAM133BQ5BKY9 247 aaKnown RBP16.64■□□□□ 0.25
CHFR-204ENST00000443047 PPP4R3AQ6IN85 833 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 ARFGAP2Q8N6H7 521 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 PLCD4Q9BRC7 762 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 CAPN11Q9UMQ6 739 aa16.64■□□□□ 0.25
CHFR-204ENST00000443047 NHSQ6T4R5 1651 aa16.63■□□□□ 0.25
CHFR-204ENST00000443047 GTF2IP78347 998 aa16.63■□□□□ 0.25
CHFR-204ENST00000443047 INF2Q27J81 1249 aa16.63■□□□□ 0.25
CHFR-204ENST00000443047 GNPTABQ3T906 1256 aa16.63■□□□□ 0.25
CHFR-204ENST00000443047 CHADLQ6NUI6 762 aa16.63■□□□□ 0.25
CHFR-204ENST00000443047 BLIDQ8IZY5 108 aa16.63■□□□□ 0.25
CHFR-204ENST00000443047 CCDC63Q8NA47 563 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms