RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 USP26Q9BXU7 913 aa23.07■■□□□ 1.28
UBE2F-215ENST00000441728 U3KPZ7 1027 aaPredicted RBP23.07■■□□□ 1.28
UBE2F-215ENST00000441728 PNMA6FA0A0J9YX94 578 aa23.06■■□□□ 1.28
UBE2F-215ENST00000441728 CAND2O75155 1236 aa23.06■■□□□ 1.28
UBE2F-215ENST00000441728 STAM2O75886 525 aa23.06■■□□□ 1.28
UBE2F-215ENST00000441728 SP2Q02086 613 aa23.06■■□□□ 1.28
UBE2F-215ENST00000441728 WTAPQ15007 396 aa23.06■■□□□ 1.28
UBE2F-215ENST00000441728 PLEKHG4Q58EX7 1191 aa23.06■■□□□ 1.28
UBE2F-215ENST00000441728 TRAF7Q6Q0C0 670 aa23.06■■□□□ 1.28
UBE2F-215ENST00000441728 CYB5R4Q7L1T6 521 aa23.06■■□□□ 1.28
UBE2F-215ENST00000441728 CUL5Q93034 780 aa23.06■■□□□ 1.28
UBE2F-215ENST00000441728 TREHO43280 583 aa23.05■■□□□ 1.28
UBE2F-215ENST00000441728 TIGD5Q53EQ6 642 aa23.05■■□□□ 1.28
UBE2F-215ENST00000441728 CATIPQ7Z7H3 387 aa23.05■■□□□ 1.28
UBE2F-215ENST00000441728 PIBF1Q8WXW3 757 aa23.05■■□□□ 1.28
UBE2F-215ENST00000441728 MRPL38Q96DV4 380 aaKnown RBP23.05■■□□□ 1.28
UBE2F-215ENST00000441728 RIOX1Q9H6W3 641 aa23.05■■□□□ 1.28
UBE2F-215ENST00000441728 TRANK1O15050 2925 aa23.04■■□□□ 1.28
UBE2F-215ENST00000441728 FIBPO43427 364 aa23.04■■□□□ 1.28
UBE2F-215ENST00000441728 IGHDP01880 384 aa23.04■■□□□ 1.28
UBE2F-215ENST00000441728 HIC1Q14526 733 aa23.04■■□□□ 1.28
UBE2F-215ENST00000441728 LEXMQ3ZCV2 418 aa23.04■■□□□ 1.28
UBE2F-215ENST00000441728 UTP14CQ5TAP6 766 aaKnown RBP23.04■■□□□ 1.28
UBE2F-215ENST00000441728 CYFIP1Q7L576 1253 aa23.04■■□□□ 1.28
UBE2F-215ENST00000441728 SMARCC2Q8TAQ2 1214 aa23.04■■□□□ 1.28
UBE2F-215ENST00000441728 GPKOWQ92917 476 aaPredicted RBP eCLIP23.04■■□□□ 1.282e-6■■■■■ 37.1
UBE2F-215ENST00000441728 RNPEPQ9H4A4 650 aa23.04■■□□□ 1.28
UBE2F-215ENST00000441728 FAM50BQ9Y247 325 aa23.04■■□□□ 1.28
UBE2F-215ENST00000441728 HTRA4P83105 476 aaPredicted RBP23.03■■□□□ 1.28
UBE2F-215ENST00000441728 SP4Q02446 784 aa23.03■■□□□ 1.28
UBE2F-215ENST00000441728 GPM6BQ13491 265 aa23.03■■□□□ 1.28
UBE2F-215ENST00000441728 PUS10Q3MIT2 529 aaKnown RBP23.03■■□□□ 1.28
UBE2F-215ENST00000441728 EPC2Q52LR7 807 aa23.03■■□□□ 1.28
UBE2F-215ENST00000441728 PTCRAQ6ISU1 281 aaPredicted RBP23.03■■□□□ 1.28
UBE2F-215ENST00000441728 METTL7BQ6UX53 244 aa23.03■■□□□ 1.28
UBE2F-215ENST00000441728 GJD3Q8N144 294 aa23.03■■□□□ 1.28
UBE2F-215ENST00000441728 NCOA7Q8NI08 942 aa23.03■■□□□ 1.28
UBE2F-215ENST00000441728 APBB2Q92870 758 aa23.03■■□□□ 1.28
UBE2F-215ENST00000441728 IFIH1Q9BYX4 1025 aaKnown RBP23.03■■□□□ 1.28
UBE2F-215ENST00000441728 RTEL1Q9NZ71 1219 aa23.03■■□□□ 1.28
UBE2F-215ENST00000441728 BDP1A6H8Y1 2624 aa23.03■■□□□ 1.28
UBE2F-215ENST00000441728 MICAL3Q7RTP6 2002 aa23.03■■□□□ 1.28
UBE2F-215ENST00000441728 FAM86C2PA6NEL3 165 aa23.02■■□□□ 1.28
UBE2F-215ENST00000441728 ARHGAP4P98171 946 aa23.02■■□□□ 1.28
UBE2F-215ENST00000441728 NLRX1Q86UT6 975 aa23.02■■□□□ 1.28
UBE2F-215ENST00000441728 SETD4Q9NVD3 440 aa23.02■■□□□ 1.28
UBE2F-215ENST00000441728 SEC63Q9UGP8 760 aaKnown RBP23.02■■□□□ 1.28
UBE2F-215ENST00000441728 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.01■■□□□ 1.27
UBE2F-215ENST00000441728 GPR37L1O60883 481 aa23.01■■□□□ 1.27
UBE2F-215ENST00000441728 ICAM3P32942 547 aa23.01■■□□□ 1.27
UBE2F-215ENST00000441728 BANK1Q8NDB2 785 aa23.01■■□□□ 1.27
UBE2F-215ENST00000441728 CTCFLQ8NI51 663 aaPredicted RBP23.01■■□□□ 1.27
UBE2F-215ENST00000441728 SP7Q8TDD2 431 aaPredicted RBP23.01■■□□□ 1.27
UBE2F-215ENST00000441728 TOP1MTQ969P6 601 aa23.01■■□□□ 1.27
UBE2F-215ENST00000441728 ARIH1Q9Y4X5 557 aaPredicted RBP23.01■■□□□ 1.27
UBE2F-215ENST00000441728 REV3LO60673 3130 aa23.01■■□□□ 1.27
UBE2F-215ENST00000441728 CSPP1Q1MSJ5 1256 aa23■■□□□ 1.27
UBE2F-215ENST00000441728 RSPH3Q86UC2 560 aa23■■□□□ 1.27
UBE2F-215ENST00000441728 TMEM192Q8IY95 271 aa23■■□□□ 1.27
UBE2F-215ENST00000441728 GIMAP8Q8ND71 665 aaPredicted RBP23■■□□□ 1.27
UBE2F-215ENST00000441728 RRP36Q96EU6 259 aaKnown RBP23■■□□□ 1.27
UBE2F-215ENST00000441728 INPP4AQ96PE3 977 aaPredicted RBP23■■□□□ 1.27
UBE2F-215ENST00000441728 GPR20Q99678 358 aa23■■□□□ 1.27
UBE2F-215ENST00000441728 XIRP2A4UGR9 3374 aa23■■□□□ 1.27
UBE2F-215ENST00000441728 SPATA31C2B4DYI2 1134 aa22.99■■□□□ 1.27
UBE2F-215ENST00000441728 PI4K2BG5E9Z4 385 aa22.99■■□□□ 1.27
UBE2F-215ENST00000441728 H3BNC9 293 aa22.99■■□□□ 1.27
UBE2F-215ENST00000441728 IL9P15248 144 aa22.99■■□□□ 1.27
UBE2F-215ENST00000441728 KIF5BP33176 963 aa22.99■■□□□ 1.27
UBE2F-215ENST00000441728 FAM178BQ8IXR5 827 aa22.99■■□□□ 1.27
UBE2F-215ENST00000441728 FIBCD1Q8N539 461 aa22.99■■□□□ 1.27
UBE2F-215ENST00000441728 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.99■■□□□ 1.27
UBE2F-215ENST00000441728 UIMC1Q96RL1 719 aa22.99■■□□□ 1.27
UBE2F-215ENST00000441728 CYTH3O43739 400 aa22.98■■□□□ 1.27
UBE2F-215ENST00000441728 CYP21A2P08686 494 aa22.98■■□□□ 1.27
UBE2F-215ENST00000441728 ALADP13716 330 aa22.98■■□□□ 1.27
UBE2F-215ENST00000441728 HOXC8P31273 242 aa22.98■■□□□ 1.27
UBE2F-215ENST00000441728 CTNNB1P35222 781 aa22.98■■□□□ 1.27
UBE2F-215ENST00000441728 MRPS9P82933 396 aaKnown RBP22.98■■□□□ 1.27
UBE2F-215ENST00000441728 XRRA1Q6P2D8 792 aa22.98■■□□□ 1.27
UBE2F-215ENST00000441728 TRIM50Q86XT4 487 aa22.98■■□□□ 1.27
UBE2F-215ENST00000441728 EXOC6Q8TAG9 804 aa22.98■■□□□ 1.27
UBE2F-215ENST00000441728 IL17RAQ96F46 866 aa22.98■■□□□ 1.27
UBE2F-215ENST00000441728 NSUN3Q9H649 340 aaKnown RBP22.98■■□□□ 1.27
UBE2F-215ENST00000441728 BCAS3Q9H6U6 928 aa22.98■■□□□ 1.27
UBE2F-215ENST00000441728 NRCAMQ92823 1304 aa22.98■■□□□ 1.27
UBE2F-215ENST00000441728 H3BQ06 376 aaPredicted RBP22.97■■□□□ 1.27
UBE2F-215ENST00000441728 TTC22Q5TAA0 569 aa22.97■■□□□ 1.27
UBE2F-215ENST00000441728 KHSRPQ92945 711 aaKnown RBP eCLIP22.97■■□□□ 1.277e-7■■■□□ 18.8
UBE2F-215ENST00000441728 CDHR1Q96JP9 859 aa22.97■■□□□ 1.27
UBE2F-215ENST00000441728 YTHDC1Q96MU7 727 aaKnown RBP22.97■■□□□ 1.27
UBE2F-215ENST00000441728 IL25Q9H293 177 aa22.97■■□□□ 1.27
UBE2F-215ENST00000441728 RWDD3Q9Y3V2 267 aa22.97■■□□□ 1.27
UBE2F-215ENST00000441728 BAZ2BQ9UIF8 2168 aaKnown RBP22.96■■□□□ 1.27
UBE2F-215ENST00000441728 GRXCR2A6NFK2 248 aa22.96■■□□□ 1.27
UBE2F-215ENST00000441728 E7EWF7 191 aa22.96■■□□□ 1.27
UBE2F-215ENST00000441728 TROAPQ12815 778 aa22.96■■□□□ 1.27
UBE2F-215ENST00000441728 MKRN4PQ13434 485 aaPredicted RBP22.96■■□□□ 1.27
UBE2F-215ENST00000441728 TCEAL5Q5H9L2 206 aa22.96■■□□□ 1.27
UBE2F-215ENST00000441728 PCNX4Q63HM2 1172 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms