RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 FAM151AQ8WW52 585 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 TRIM43Q96BQ3 446 aaPredicted RBP5.85□□□□□ -1.47
PTPN4-206ENST00000441089 SUCLG2Q96I99 432 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 FAM46AQ96IP4 442 aaKnown RBP5.85□□□□□ -1.47
PTPN4-206ENST00000441089 PRRX2Q99811 253 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 ZMYND15Q9H091 742 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTPN4-206ENST00000441089 DDX20Q9UHI6 824 aaKnown RBP5.85□□□□□ -1.47
PTPN4-206ENST00000441089 LRFN2Q9ULH4 789 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 ZMIZ1Q9ULJ6 1067 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 JAG2Q9Y219 1238 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 AFG3L2Q9Y4W6 797 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 LRRFIP2Q9Y608 721 aaKnown RBP5.85□□□□□ -1.47
PTPN4-206ENST00000441089 KCNMB2Q9Y691 235 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 CACNA1FO60840 1977 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 MAST4O15021 2626 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 FRYLO94915 3013 aa5.85□□□□□ -1.47
PTPN4-206ENST00000441089 TECTAO75443 2155 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 LINC01387J3KSC0 135 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 GRM8O00222 908 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 KIAA0355O15063 1070 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 GSC2O15499 205 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 ADAM11O75078 769 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 GNAI3P08754 354 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 CLTBP09497 229 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 PTPRAP18433 802 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 POU3F3P20264 500 aaPredicted RBP5.84□□□□□ -1.47
PTPN4-206ENST00000441089 MAPK4P31152 587 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 TLE2Q04725 743 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 NEXNQ0ZGT2 675 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 HDAC1Q13547 482 aaPredicted RBP5.84□□□□□ -1.47
PTPN4-206ENST00000441089 RNF43Q68DV7 783 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 SCYL3Q8IZE3 742 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 GJD3Q8N144 294 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 ANKRD44Q8N8A2 993 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 TBC1D22AQ8WUA7 517 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 MFSD14AQ96MC6 490 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 ZDHHC15Q96MV8 337 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 APBA2Q99767 749 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 MRIQ9BWK5 157 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 MORF4L1Q9UBU8 362 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 A0A0G2JMZ2 1700 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 UNC79Q9P2D8 2635 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 USP24Q9UPU5 2620 aa5.84□□□□□ -1.47
PTPN4-206ENST00000441089 MAST3O60307 1309 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 PNMA6EA0A0J9YXQ4 647 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 DDX3YO15523 660 aaKnown RBP5.83□□□□□ -1.48
PTPN4-206ENST00000441089 DHX15O43143 795 aaKnown RBP5.83□□□□□ -1.48
PTPN4-206ENST00000441089 XYLBO75191 536 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 GLRX3O76003 335 aaKnown RBP5.83□□□□□ -1.48
PTPN4-206ENST00000441089 ATG7O95352 703 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 GNAI2P04899 355 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 UBTFL1P0CB47 393 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-206ENST00000441089 CNGA1P29973 690 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 ATP11AP98196 1134 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 ATP8B2P98198 1209 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 PPIGQ13427 754 aaKnown RBP eCLIP5.83□□□□□ -1.482e-7■□□□□ 9.1
PTPN4-206ENST00000441089 COL19A1Q14993 1142 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 TRIP4Q15650 581 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-206ENST00000441089 C11orf91Q3C1V1 193 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 FAM26DQ5JW98 314 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 ACAD11Q709F0 780 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 UBE3BQ7Z3V4 1068 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 RGL4Q8IZJ4 473 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 SHKBP1Q8TBC3 707 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 FOXD4L4Q8WXT5 416 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-206ENST00000441089 USP6NLQ92738 828 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 UTP4Q969X6 686 aaKnown RBP5.83□□□□□ -1.48
PTPN4-206ENST00000441089 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.83□□□□□ -1.48
PTPN4-206ENST00000441089 MTIF3Q9H2K0 278 aaKnown RBP5.83□□□□□ -1.48
PTPN4-206ENST00000441089 CHMP4BQ9H444 224 aaKnown RBP5.83□□□□□ -1.48
PTPN4-206ENST00000441089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.83□□□□□ -1.48
PTPN4-206ENST00000441089 C9orf78Q9NZ63 289 aaPredicted RBP5.83□□□□□ -1.48
PTPN4-206ENST00000441089 MYH13Q9UKX3 1938 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 ATAD5Q96QE3 1844 aa5.83□□□□□ -1.48
PTPN4-206ENST00000441089 TRIM75PA6NK02 468 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 GRXCR1A8MXD5 290 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 DCXO43602 365 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 CTNND1O60716 968 aaKnown RBP5.82□□□□□ -1.48
PTPN4-206ENST00000441089 WNT11O96014 354 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 HOXD8P13378 290 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-206ENST00000441089 CDC25BP30305 580 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 FOXO4P98177 505 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 MTX1Q13505 466 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 OCLNQ16625 522 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 CCL14Q16627 93 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 TREML2Q5T2D2 321 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 GJC2Q5T442 439 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-206ENST00000441089 RASIP1Q5U651 963 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 PSRC1Q6PGN9 363 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-206ENST00000441089 CENPQQ7L2Z9 268 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-206ENST00000441089 RPAP2Q8IXW5 612 aaPredicted RBP5.82□□□□□ -1.48
PTPN4-206ENST00000441089 SMC5Q8IY18 1101 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 SHISA5Q8N114 240 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 SLC44A5Q8NCS7 719 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 GPRC5AQ8NFJ5 357 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 UBASH3BQ8TF42 649 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 DBNDD2Q9BQY9 259 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 IRF2BPLQ9H1B7 796 aa5.82□□□□□ -1.48
PTPN4-206ENST00000441089 ASCC2Q9H1I8 757 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms