RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 EP400NLQ6ZTU2 488 aa23.96■■□□□ 1.43
TRIM39-210ENST00000440271 IL31RAQ8NI17 732 aa23.96■■□□□ 1.43
TRIM39-210ENST00000440271 ZFP91Q96JP5 570 aaPredicted RBP23.96■■□□□ 1.43
TRIM39-210ENST00000440271 MYH6P13533 1939 aa23.95■■□□□ 1.42
TRIM39-210ENST00000440271 TREHO43280 583 aa23.95■■□□□ 1.42
TRIM39-210ENST00000440271 DCXO43602 365 aa23.95■■□□□ 1.42
TRIM39-210ENST00000440271 COL19A1Q14993 1142 aa23.95■■□□□ 1.42
TRIM39-210ENST00000440271 SAMD3Q8N6K7 520 aa23.95■■□□□ 1.42
TRIM39-210ENST00000440271 GPKOWQ92917 476 aaPredicted RBP eCLIP23.95■■□□□ 1.42
TRIM39-210ENST00000440271 RNPEPQ9H4A4 650 aa23.95■■□□□ 1.42
TRIM39-210ENST00000440271 NSUN3Q9H649 340 aaKnown RBP23.95■■□□□ 1.42
TRIM39-210ENST00000440271 PCDHA1Q9Y5I3 950 aa23.95■■□□□ 1.42
TRIM39-210ENST00000440271 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.94■■□□□ 1.42
TRIM39-210ENST00000440271 ZBTB5O15062 677 aa23.94■■□□□ 1.42
TRIM39-210ENST00000440271 CAND2O75155 1236 aa23.94■■□□□ 1.42
TRIM39-210ENST00000440271 MTMR8Q96EF0 704 aa23.94■■□□□ 1.42
TRIM39-210ENST00000440271 BCAS3Q9H6U6 928 aa23.94■■□□□ 1.42
TRIM39-210ENST00000440271 PRKAG3Q9UGI9 489 aa23.94■■□□□ 1.42
TRIM39-210ENST00000440271 FAM50BQ9Y247 325 aa23.94■■□□□ 1.42
TRIM39-210ENST00000440271 KLRF2D3W0D1 207 aa23.93■■□□□ 1.42
TRIM39-210ENST00000440271 LGALS2P05162 132 aa23.93■■□□□ 1.42
TRIM39-210ENST00000440271 CTSHP09668 335 aa23.93■■□□□ 1.42
TRIM39-210ENST00000440271 CCND2P30279 289 aa23.93■■□□□ 1.42
TRIM39-210ENST00000440271 ZP2Q05996 745 aa23.93■■□□□ 1.42
TRIM39-210ENST00000440271 HDAC1Q13547 482 aaPredicted RBP23.93■■□□□ 1.42
TRIM39-210ENST00000440271 CWC27Q6UX04 472 aaKnown RBP23.92■■□□□ 1.42
TRIM39-210ENST00000440271 UBAC1Q9BSL1 405 aa23.92■■□□□ 1.42
TRIM39-210ENST00000440271 IFIH1Q9BYX4 1025 aaKnown RBP23.92■■□□□ 1.42
TRIM39-210ENST00000440271 KRT23Q9C075 422 aa23.92■■□□□ 1.42
TRIM39-210ENST00000440271 LNPKQ9C0E8 428 aa23.92■■□□□ 1.42
TRIM39-210ENST00000440271 CLDND1Q9NY35 253 aa23.92■■□□□ 1.42
TRIM39-210ENST00000440271 C19orf67A6NJJ6 358 aa23.91■■□□□ 1.42
TRIM39-210ENST00000440271 GCOM1H8Y6P7 765 aaPredicted RBP23.91■■□□□ 1.42
TRIM39-210ENST00000440271 POLR2MP0CAP2 368 aa23.91■■□□□ 1.42
TRIM39-210ENST00000440271 IMMTQ16891 758 aaKnown RBP23.91■■□□□ 1.42
TRIM39-210ENST00000440271 IFIT1BQ5T764 474 aaKnown RBP23.91■■□□□ 1.42
TRIM39-210ENST00000440271 FCHSD1Q86WN1 690 aa23.91■■□□□ 1.42
TRIM39-210ENST00000440271 USP26Q9BXU7 913 aa23.91■■□□□ 1.42
TRIM39-210ENST00000440271 SETD4Q9NVD3 440 aa23.91■■□□□ 1.42
TRIM39-210ENST00000440271 MAD2L2Q9UI95 211 aa23.91■■□□□ 1.42
TRIM39-210ENST00000440271 NOP56O00567 594 aaKnown RBP23.9■■□□□ 1.42
TRIM39-210ENST00000440271 GNAT1P11488 350 aa23.9■■□□□ 1.42
TRIM39-210ENST00000440271 MRE11P49959 708 aa23.9■■□□□ 1.42
TRIM39-210ENST00000440271 ADHFE1Q8IWW8 467 aa23.9■■□□□ 1.42
TRIM39-210ENST00000440271 APBB2Q92870 758 aa23.9■■□□□ 1.42
TRIM39-210ENST00000440271 IL17RAQ96F46 866 aa23.9■■□□□ 1.42
TRIM39-210ENST00000440271 COL4A6Q14031 1691 aa23.89■■□□□ 1.42
TRIM39-210ENST00000440271 NCK2O43639 380 aa23.89■■□□□ 1.41
TRIM39-210ENST00000440271 LTBRP36941 435 aa23.89■■□□□ 1.41
TRIM39-210ENST00000440271 FIBCD1Q8N539 461 aa23.89■■□□□ 1.41
TRIM39-210ENST00000440271 FBXL18Q96ME1 805 aa23.89■■□□□ 1.41
TRIM39-210ENST00000440271 DSCC1Q9BVC3 393 aa23.89■■□□□ 1.41
TRIM39-210ENST00000440271 KCNH6Q9H252 994 aa23.89■■□□□ 1.41
TRIM39-210ENST00000440271 CNNM2Q9H8M5 875 aa23.89■■□□□ 1.41
TRIM39-210ENST00000440271 PALM3A6NDB9 673 aaPredicted RBP23.88■■□□□ 1.41
TRIM39-210ENST00000440271 C5orf67F2Z3F1 127 aa23.88■■□□□ 1.41
TRIM39-210ENST00000440271 NHLH1Q02575 133 aa23.88■■□□□ 1.41
TRIM39-210ENST00000440271 TRAF1Q13077 416 aa23.88■■□□□ 1.41
TRIM39-210ENST00000440271 SEC23AQ15436 765 aa23.88■■□□□ 1.41
TRIM39-210ENST00000440271 FAM26DQ5JW98 314 aa23.88■■□□□ 1.41
TRIM39-210ENST00000440271 RPAINQ86UA6 219 aa23.88■■□□□ 1.41
TRIM39-210ENST00000440271 HOMER1Q86YM7 354 aa23.88■■□□□ 1.41
TRIM39-210ENST00000440271 GPR20Q99678 358 aa23.88■■□□□ 1.41
TRIM39-210ENST00000440271 UPF3BQ9BZI7 483 aaKnown RBP23.88■■□□□ 1.41
TRIM39-210ENST00000440271 DIAPH3Q9NSV4 1193 aa23.88■■□□□ 1.41
TRIM39-210ENST00000440271 LAMA4Q16363 1823 aa23.88■■□□□ 1.41
TRIM39-210ENST00000440271 MYO7AQ13402 2215 aa23.88■■□□□ 1.41
TRIM39-210ENST00000440271 SPATA31C2B4DYI2 1134 aa23.87■■□□□ 1.41
TRIM39-210ENST00000440271 RB1P06400 928 aa23.87■■□□□ 1.41
TRIM39-210ENST00000440271 ICAM3P32942 547 aa23.87■■□□□ 1.41
TRIM39-210ENST00000440271 CTNNB1P35222 781 aa23.87■■□□□ 1.41
TRIM39-210ENST00000440271 ADAM17P78536 824 aa23.87■■□□□ 1.41
TRIM39-210ENST00000440271 MRPS9P82933 396 aaKnown RBP23.87■■□□□ 1.41
TRIM39-210ENST00000440271 NEDD9Q14511 834 aa23.87■■□□□ 1.41
TRIM39-210ENST00000440271 SLC35G1Q2M3R5 365 aa23.87■■□□□ 1.41
TRIM39-210ENST00000440271 CTC1Q2NKJ3 1217 aa23.87■■□□□ 1.41
TRIM39-210ENST00000440271 GNPTABQ3T906 1256 aa23.87■■□□□ 1.41
TRIM39-210ENST00000440271 METTL7BQ6UX53 244 aa23.87■■□□□ 1.41
TRIM39-210ENST00000440271 CYFIP1Q7L576 1253 aa23.87■■□□□ 1.41
TRIM39-210ENST00000440271 PIGSQ96S52 555 aa23.87■■□□□ 1.41
TRIM39-210ENST00000440271 LINC00271P0C7V0 271 aa23.86■■□□□ 1.41
TRIM39-210ENST00000440271 IRS1P35568 1242 aa23.86■■□□□ 1.41
TRIM39-210ENST00000440271 BMPR1AP36894 532 aa23.86■■□□□ 1.41
TRIM39-210ENST00000440271 INPP4AQ96PE3 977 aaPredicted RBP23.86■■□□□ 1.41
TRIM39-210ENST00000440271 LMAN2LQ9H0V9 348 aa23.86■■□□□ 1.41
TRIM39-210ENST00000440271 RIOX1Q9H6W3 641 aa23.86■■□□□ 1.41
TRIM39-210ENST00000440271 GRM6O15303 877 aa23.85■■□□□ 1.41
TRIM39-210ENST00000440271 STAM2O75886 525 aa23.85■■□□□ 1.41
TRIM39-210ENST00000440271 RRP1P56182 461 aaKnown RBP23.85■■□□□ 1.41
TRIM39-210ENST00000440271 ARHGAP4P98171 946 aa23.85■■□□□ 1.41
TRIM39-210ENST00000440271 DLX2Q07687 328 aaPredicted RBP23.85■■□□□ 1.41
TRIM39-210ENST00000440271 HYAL1Q12794 435 aa23.85■■□□□ 1.41
TRIM39-210ENST00000440271 SMAD2Q15796 467 aaKnown RBP23.85■■□□□ 1.41
TRIM39-210ENST00000440271 HFE2Q6ZVN8 426 aa23.85■■□□□ 1.41
TRIM39-210ENST00000440271 TRIM50Q86XT4 487 aa23.85■■□□□ 1.41
TRIM39-210ENST00000440271 PLEKHM2Q8IWE5 1019 aa23.85■■□□□ 1.41
TRIM39-210ENST00000440271 C11orf84Q9BUA3 381 aaPredicted RBP23.85■■□□□ 1.41
TRIM39-210ENST00000440271 RTEL1Q9NZ71 1219 aa23.85■■□□□ 1.41
TRIM39-210ENST00000440271 NLRC5Q86WI3 1866 aa23.85■■□□□ 1.41
TRIM39-210ENST00000440271 CHRNA1P02708 482 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms