RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 COPB2P35606 906 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 GYG1P46976 350 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 AMPD3Q01432 767 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-209ENST00000439886 TXNRD1Q16881 649 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 SOGA3Q5TF21 947 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 KIF2BQ8N4N8 673 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 WDR17Q8IZU2 1322 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 EPB41P11171 864 aaKnown RBP12.8□□□□□ -0.36
SMPD4-209ENST00000439886 DDR1Q08345 913 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 ITGB3BPQ13352 177 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-209ENST00000439886 CCDC38Q502W7 563 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-209ENST00000439886 ZCRB1Q8TBF4 217 aaKnown RBP12.8□□□□□ -0.36
SMPD4-209ENST00000439886 TAF1DQ9H5J8 278 aaPredicted RBP12.8□□□□□ -0.36
SMPD4-209ENST00000439886 PLAGL2Q9UPG8 496 aa12.8□□□□□ -0.36
SMPD4-209ENST00000439886 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-209ENST00000439886 RASSF10A6NK89 507 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 DIAPH2O60879 1101 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 CALML3P27482 149 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 THEMIS2Q5TEJ8 643 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 TMTC3Q6ZXV5 915 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 TMOD3Q9NYL9 352 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 MST1RQ04912 1400 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 MAP3K15Q6ZN16 1313 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 NAPAP54920 295 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 KCNB1Q14721 858 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 CNNM4Q6P4Q7 775 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 SV2BQ7L1I2 683 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 GIMAP8Q8ND71 665 aaPredicted RBP12.79□□□□□ -0.36
SMPD4-209ENST00000439886 MKNK2Q9HBH9 465 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 TMBIM4Q9HC24 238 aa12.79□□□□□ -0.36
SMPD4-209ENST00000439886 TCRBV5S4A2TA0A5A2 114 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 CYP2D6P10635 497 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 FLT3P36888 993 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 EVA1CP58658 441 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 ERVK-9P63128 1117 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 LRRC14Q15048 493 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 PEX26Q7Z412 305 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 KIAA0825Q8IV33 1275 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 ANKRD42Q8N9B4 389 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 LBHD1Q9BQE6 289 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-209ENST00000439886 KCNK9Q9NPC2 374 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 CNOT8Q9UFF9 292 aaKnown RBP12.78□□□□□ -0.36
SMPD4-209ENST00000439886 FAM205AQ6ZU69 1335 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 SART1O43290 800 aaKnown RBP12.78□□□□□ -0.36
SMPD4-209ENST00000439886 CAPN15O75808 1086 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 RASSF9O75901 435 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 MMEP08473 750 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 IGHMBP2P38935 993 aaKnown RBP12.78□□□□□ -0.36
SMPD4-209ENST00000439886 LAMB3Q13751 1172 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 GLE1Q53GS7 698 aaKnown RBP12.78□□□□□ -0.36
SMPD4-209ENST00000439886 OTUD6AQ7L8S5 288 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 TMEM110-MUSTN1A8MSY1 372 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 TTI1O43156 1089 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 FGFR1OPO95684 399 aaKnown RBP12.78□□□□□ -0.36
SMPD4-209ENST00000439886 CALM1P0DP23 149 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 CALM2P0DP24 149 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 CALM3P0DP25 149 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 KIF5BP33176 963 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 PLTPP55058 493 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 ALX1Q15699 326 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 CDC37Q16543 378 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-209ENST00000439886 NAALADL2Q58DX5 795 aa12.78□□□□□ -0.36
SMPD4-209ENST00000439886 STARD3NLO95772 234 aa12.77□□□□□ -0.36
SMPD4-209ENST00000439886 ABCB4P21439 1286 aa12.77□□□□□ -0.36
SMPD4-209ENST00000439886 ASIC2Q16515 512 aa12.77□□□□□ -0.36
SMPD4-209ENST00000439886 MAN2A1Q16706 1144 aa12.77□□□□□ -0.36
SMPD4-209ENST00000439886 PPP4R3AQ6IN85 833 aa12.77□□□□□ -0.36
SMPD4-209ENST00000439886 CHADLQ6NUI6 762 aa12.77□□□□□ -0.36
SMPD4-209ENST00000439886 STAG2Q8N3U4 1231 aa12.77□□□□□ -0.36
SMPD4-209ENST00000439886 ARHGEF1Q92888 912 aaKnown RBP12.77□□□□□ -0.36
SMPD4-209ENST00000439886 TRIM51Q9BSJ1 452 aa12.77□□□□□ -0.36
SMPD4-209ENST00000439886 PRDM11Q9NQV5 511 aa12.77□□□□□ -0.36
SMPD4-209ENST00000439886 LMCD1Q9NZU5 365 aa12.77□□□□□ -0.36
SMPD4-209ENST00000439886 TSKSQ9UJT2 592 aa12.77□□□□□ -0.36
SMPD4-209ENST00000439886 TRIM37O94972 964 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 ANP32DO95626 131 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 ITGA4P13612 1032 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 ADGRA1Q86SQ6 560 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 DRAXINQ8NBI3 349 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-209ENST00000439886 PRCCQ92733 491 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-209ENST00000439886 TRIM9Q9C026 710 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.77□□□□□ -0.374e-13■■■■■ 141.9
SMPD4-209ENST00000439886 ASAP1Q9ULH1 1129 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 UTP11Q9Y3A2 253 aaKnown RBP12.77□□□□□ -0.37
SMPD4-209ENST00000439886 A0A087X0T9 212 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 RHOBTB3O94955 611 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 FAM228BP0C875 321 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 ZNF844Q08AG5 666 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 DCAF17Q5H9S7 520 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-209ENST00000439886 MIIPQ5JXC2 388 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 B4GALNT2Q8NHY0 566 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 ISCA1Q9BUE6 129 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 SEMA6BQ9H3T3 888 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 INTS9Q9NV88 658 aaKnown RBP12.77□□□□□ -0.37
SMPD4-209ENST00000439886 MCM9Q9NXL9 1143 aa12.77□□□□□ -0.37
SMPD4-209ENST00000439886 RBM47A0AV96 593 aaKnown RBP12.76□□□□□ -0.37
SMPD4-209ENST00000439886 RGS16O15492 202 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-209ENST00000439886 ATP6V1G2O95670 118 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms