RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 ARNTL2Q8WYA1 636 aa13.23□□□□□ -0.29
IRF1-204ENST00000439555 CUL5Q93034 780 aa13.23□□□□□ -0.29
IRF1-204ENST00000439555 INPP4AQ96PE3 977 aaPredicted RBP13.23□□□□□ -0.29
IRF1-204ENST00000439555 CERS4Q9HA82 394 aa13.23□□□□□ -0.29
IRF1-204ENST00000439555 GTF2IRD1Q9UHL9 959 aa13.23□□□□□ -0.29
IRF1-204ENST00000439555 NOD1Q9Y239 953 aa13.23□□□□□ -0.29
IRF1-204ENST00000439555 SLC12A7Q9Y666 1083 aa13.23□□□□□ -0.29
IRF1-204ENST00000439555 FAM86C2PA6NEL3 165 aa13.22□□□□□ -0.29
IRF1-204ENST00000439555 SPATA31C2B4DYI2 1134 aa13.22□□□□□ -0.29
IRF1-204ENST00000439555 PSEN2P49810 448 aa13.22□□□□□ -0.29
IRF1-204ENST00000439555 MRPS9P82933 396 aaKnown RBP13.22□□□□□ -0.29
IRF1-204ENST00000439555 NEDD9Q14511 834 aa13.22□□□□□ -0.29
IRF1-204ENST00000439555 PUS10Q3MIT2 529 aaKnown RBP13.22□□□□□ -0.29
IRF1-204ENST00000439555 LEXMQ3ZCV2 418 aa13.22□□□□□ -0.29
IRF1-204ENST00000439555 GDF6Q6KF10 455 aaPredicted RBP13.22□□□□□ -0.29
IRF1-204ENST00000439555 C7orf31Q8N865 590 aa13.22□□□□□ -0.29
IRF1-204ENST00000439555 FANCBQ8NB91 859 aa13.22□□□□□ -0.29
IRF1-204ENST00000439555 IL31RAQ8NI17 732 aa13.22□□□□□ -0.29
IRF1-204ENST00000439555 SPATA33Q96N06 139 aa13.22□□□□□ -0.29
IRF1-204ENST00000439555 NEK1Q96PY6 1258 aa13.22□□□□□ -0.29
IRF1-204ENST00000439555 CTAGE1Q96RT6 745 aa13.22□□□□□ -0.29
IRF1-204ENST00000439555 MYL10Q9BUA6 226 aa13.22□□□□□ -0.29
IRF1-204ENST00000439555 MEIS2O14770 477 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 FIBPO43427 364 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 CDC45O75419 566 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 GGPS1O95749 300 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 UBA1P22314 1058 aaKnown RBP13.21□□□□□ -0.29
IRF1-204ENST00000439555 EXOSC10Q01780 885 aaKnown RBP13.21□□□□□ -0.29
IRF1-204ENST00000439555 SP2Q02086 613 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 NHLH1Q02575 133 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 KRT32Q14532 448 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 MFSD10Q14728 455 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 KIAA0753Q2KHM9 967 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 HSDL1Q3SXM5 330 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 PCNX4Q63HM2 1172 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 SYNE3Q6ZMZ3 975 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 DEFB128Q7Z7B8 93 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 SMARCC2Q8TAQ2 1214 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 SENP7Q9BQF6 1050 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 PSTPIP2Q9H939 334 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 MLXIPQ9HAP2 919 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 HDAC6Q9UBN7 1215 aa13.21□□□□□ -0.29
IRF1-204ENST00000439555 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
IRF1-204ENST00000439555 PLEKHA8P1O95397 391 aa13.2□□□□□ -0.3
IRF1-204ENST00000439555 HMGB1P09429 215 aaKnown RBP13.2□□□□□ -0.3
IRF1-204ENST00000439555 SELPP16109 830 aa13.2□□□□□ -0.3
IRF1-204ENST00000439555 RCAN1P53805 252 aa13.2□□□□□ -0.3
IRF1-204ENST00000439555 PTK7Q13308 1070 aa13.2□□□□□ -0.3
IRF1-204ENST00000439555 COL9A3Q14050 684 aaPredicted RBP13.2□□□□□ -0.3
IRF1-204ENST00000439555 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
IRF1-204ENST00000439555 METTL7BQ6UX53 244 aa13.2□□□□□ -0.3
IRF1-204ENST00000439555 TMTC3Q6ZXV5 915 aa13.2□□□□□ -0.3
IRF1-204ENST00000439555 DHX32Q7L7V1 743 aaKnown RBP13.2□□□□□ -0.3
IRF1-204ENST00000439555 C16orf70Q9BSU1 422 aa13.2□□□□□ -0.3
IRF1-204ENST00000439555 USP26Q9BXU7 913 aa13.2□□□□□ -0.3
IRF1-204ENST00000439555 UBE2ZQ9H832 354 aaPredicted RBP13.2□□□□□ -0.3
IRF1-204ENST00000439555 RBM28Q9NW13 759 aaKnown RBP13.2□□□□□ -0.3
IRF1-204ENST00000439555 ZNF318Q5VUA4 2279 aa13.2□□□□□ -0.3
IRF1-204ENST00000439555 ARHGEF15O94989 841 aa13.19□□□□□ -0.3
IRF1-204ENST00000439555 HOXC8P31273 242 aa13.19□□□□□ -0.3
IRF1-204ENST00000439555 CHMP4BP1P59074 171 aa13.19□□□□□ -0.3
IRF1-204ENST00000439555 CSPP1Q1MSJ5 1256 aa13.19□□□□□ -0.3
IRF1-204ENST00000439555 APOA5Q6Q788 366 aa13.19□□□□□ -0.3
IRF1-204ENST00000439555 USP17L6PQ6QN14 398 aa13.19□□□□□ -0.3
IRF1-204ENST00000439555 GIMAP8Q8ND71 665 aaPredicted RBP13.19□□□□□ -0.3
IRF1-204ENST00000439555 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
IRF1-204ENST00000439555 PIBF1Q8WXW3 757 aa13.19□□□□□ -0.3
IRF1-204ENST00000439555 CDHR1Q96JP9 859 aa13.19□□□□□ -0.3
IRF1-204ENST00000439555 H3BRB1 525 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 NOP56O00567 594 aaKnown RBP13.18□□□□□ -0.3
IRF1-204ENST00000439555 MAFGO15525 162 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 CXCL10P02778 98 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 ZNF286BP0CG31 522 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 CKBP12277 381 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 KCNJ6P48051 423 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 ERVK-21P61565 698 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 SEMA3FQ13275 785 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 GPNMBQ14956 572 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 LRRC8DQ7L1W4 858 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 NLRX1Q86UT6 975 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 PPP1R13LQ8WUF5 828 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
IRF1-204ENST00000439555 GPKOWQ92917 476 aaPredicted RBP eCLIP13.18□□□□□ -0.3
IRF1-204ENST00000439555 KCNB2Q92953 911 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 GPRASP2Q96D09 838 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 ALG1Q9BT22 464 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 FTOQ9C0B1 505 aaKnown RBP eCLIP13.18□□□□□ -0.3
IRF1-204ENST00000439555 TUT1Q9H6E5 874 aaKnown RBP13.18□□□□□ -0.3
IRF1-204ENST00000439555 SUGCTQ9HAC7 445 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 RTEL1Q9NZ71 1219 aa13.18□□□□□ -0.3
IRF1-204ENST00000439555 GRXCR2A6NFK2 248 aa13.17□□□□□ -0.3
IRF1-204ENST00000439555 EFCAB14O75071 495 aa13.17□□□□□ -0.3
IRF1-204ENST00000439555 RXRAP19793 462 aa13.17□□□□□ -0.3
IRF1-204ENST00000439555 FUT2Q10981 343 aa13.17□□□□□ -0.3
IRF1-204ENST00000439555 TRIM71Q2Q1W2 868 aaKnown RBP13.17□□□□□ -0.3
IRF1-204ENST00000439555 SERINC5Q86VE9 423 aa13.17□□□□□ -0.3
IRF1-204ENST00000439555 MICU3Q86XE3 530 aa13.17□□□□□ -0.3
IRF1-204ENST00000439555 RASEFQ8IZ41 740 aa13.17□□□□□ -0.3
IRF1-204ENST00000439555 CMTR1Q8N1G2 835 aaKnown RBP13.17□□□□□ -0.3
IRF1-204ENST00000439555 FBXL18Q96ME1 805 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms