RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 PALMO75781 387 aa16.97■□□□□ 0.31
APP-208ENST00000439274 SLURP2P0DP57 97 aa16.97■□□□□ 0.31
APP-208ENST00000439274 PLCG2P16885 1265 aa16.97■□□□□ 0.31
APP-208ENST00000439274 PSMD2Q13200 908 aa16.97■□□□□ 0.31
APP-208ENST00000439274 ASPRV1Q53RT3 343 aa16.97■□□□□ 0.31
APP-208ENST00000439274 DNAJC21Q5F1R6 531 aaKnown RBP16.97■□□□□ 0.31
APP-208ENST00000439274 SFMBT2Q5VUG0 894 aa16.97■□□□□ 0.31
APP-208ENST00000439274 KRT27Q7Z3Y8 459 aa16.97■□□□□ 0.31
APP-208ENST00000439274 RPGRQ92834 1020 aaKnown RBP16.97■□□□□ 0.31
APP-208ENST00000439274 CEP72Q9P209 647 aa16.97■□□□□ 0.31
APP-208ENST00000439274 hCG_1984214I3L0E3 225 aa16.97■□□□□ 0.31
APP-208ENST00000439274 IL1R1P14778 569 aa16.97■□□□□ 0.31
APP-208ENST00000439274 RNASE9P60153 205 aaKnown RBP16.97■□□□□ 0.31
APP-208ENST00000439274 SLC9C1Q4G0N8 1177 aa16.97■□□□□ 0.31
APP-208ENST00000439274 C15orf52Q6ZUT6 534 aaKnown RBP16.97■□□□□ 0.31
APP-208ENST00000439274 ZNF713Q8N859 430 aaPredicted RBP16.97■□□□□ 0.31
APP-208ENST00000439274 ARL8AQ96BM9 186 aa16.97■□□□□ 0.31
APP-208ENST00000439274 PACSIN1Q9BY11 444 aa16.97■□□□□ 0.31
APP-208ENST00000439274 GGA1Q9UJY5 639 aa16.97■□□□□ 0.31
APP-208ENST00000439274 F8W031 263 aaPredicted RBP16.96■□□□□ 0.31
APP-208ENST00000439274 SHOX2O60902 331 aaPredicted RBP16.96■□□□□ 0.31
APP-208ENST00000439274 GLI1P08151 1106 aa16.96■□□□□ 0.31
APP-208ENST00000439274 IRAK1P51617 712 aa16.96■□□□□ 0.31
APP-208ENST00000439274 EPHB4P54760 987 aa16.96■□□□□ 0.31
APP-208ENST00000439274 PROM2Q8N271 834 aa16.96■□□□□ 0.31
APP-208ENST00000439274 TBC1D5Q92609 795 aa16.96■□□□□ 0.31
APP-208ENST00000439274 KIAA1024Q9UPX6 916 aa16.96■□□□□ 0.31
APP-208ENST00000439274 DAGLAQ9Y4D2 1042 aa16.96■□□□□ 0.31
APP-208ENST00000439274 SNHG28P0DPA3 235 aa16.96■□□□□ 0.3
APP-208ENST00000439274 KLRC1P26715 233 aa16.96■□□□□ 0.3
APP-208ENST00000439274 RAPGEF1Q13905 1077 aa16.96■□□□□ 0.3
APP-208ENST00000439274 TTMPQ5BVD1 217 aa16.96■□□□□ 0.3
APP-208ENST00000439274 PPP4R3AQ6IN85 833 aa16.96■□□□□ 0.3
APP-208ENST00000439274 PRR5LQ6MZQ0 368 aa16.96■□□□□ 0.3
APP-208ENST00000439274 CERS3Q8IU89 383 aa16.96■□□□□ 0.3
APP-208ENST00000439274 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.96■□□□□ 0.3
APP-208ENST00000439274 POLLQ9UGP5 575 aa16.96■□□□□ 0.3
APP-208ENST00000439274 PCDHA12Q9UN75 941 aa16.96■□□□□ 0.3
APP-208ENST00000439274 GAKO14976 1311 aa16.95■□□□□ 0.3
APP-208ENST00000439274 PNMA6FA0A0J9YX94 578 aa16.95■□□□□ 0.3
APP-208ENST00000439274 POTEB3A0JP26 581 aa16.95■□□□□ 0.3
APP-208ENST00000439274 POTECB2RU33 542 aa16.95■□□□□ 0.3
APP-208ENST00000439274 USP17L10C9JJH3 530 aa16.95■□□□□ 0.3
APP-208ENST00000439274 RBAK-RBAKDNI3L0D1 243 aa16.95■□□□□ 0.3
APP-208ENST00000439274 SERPING1P05155 500 aa16.95■□□□□ 0.3
APP-208ENST00000439274 CARSP49589 748 aaKnown RBP16.95■□□□□ 0.3
APP-208ENST00000439274 ZNF543Q08ER8 600 aa16.95■□□□□ 0.3
APP-208ENST00000439274 POTEBQ6S5H4 581 aa16.95■□□□□ 0.3
APP-208ENST00000439274 KCTD1Q719H9 257 aa16.95■□□□□ 0.3
APP-208ENST00000439274 SH3GL2Q99962 352 aa16.95■□□□□ 0.3
APP-208ENST00000439274 EDEM3Q9BZQ6 932 aa16.95■□□□□ 0.3
APP-208ENST00000439274 LRRC27Q9C0I9 530 aa16.95■□□□□ 0.3
APP-208ENST00000439274 DDX4Q9NQI0 724 aaKnown RBP16.95■□□□□ 0.3
APP-208ENST00000439274 A0A087X0T9 212 aa16.95■□□□□ 0.3
APP-208ENST00000439274 FAM153BP0C7A2 387 aa16.95■□□□□ 0.3
APP-208ENST00000439274 FAM228BP0C875 321 aa16.95■□□□□ 0.3
APP-208ENST00000439274 CLK2P49760 499 aaKnown RBP16.95■□□□□ 0.3
APP-208ENST00000439274 FAM153CQ494X1 144 aa16.95■□□□□ 0.3
APP-208ENST00000439274 CFAP221Q4G0U5 840 aa16.95■□□□□ 0.3
APP-208ENST00000439274 TRAPPC3LQ5T215 181 aa16.95■□□□□ 0.3
APP-208ENST00000439274 RNF10Q8N5U6 811 aaKnown RBP16.95■□□□□ 0.3
APP-208ENST00000439274 FAM133AQ8N9E0 248 aa16.95■□□□□ 0.3
APP-208ENST00000439274 FAM153AQ9UHL3 310 aa16.95■□□□□ 0.3
APP-208ENST00000439274 NFU1Q9UMS0 254 aa16.95■□□□□ 0.3
APP-208ENST00000439274 ATP6V0A2Q9Y487 856 aa16.95■□□□□ 0.3
APP-208ENST00000439274 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.95■□□□□ 0.3
APP-208ENST00000439274 TRIM37O94972 964 aa16.94■□□□□ 0.3
APP-208ENST00000439274 STAT3P40763 770 aa16.94■□□□□ 0.3
APP-208ENST00000439274 GABPAQ06546 454 aa16.94■□□□□ 0.3
APP-208ENST00000439274 HERC4Q5GLZ8 1057 aaPredicted RBP16.94■□□□□ 0.3
APP-208ENST00000439274 EMBQ6PCB8 327 aa16.94■□□□□ 0.3
APP-208ENST00000439274 FAM196AQ6ZSG2 479 aa16.94■□□□□ 0.3
APP-208ENST00000439274 DNAAF5Q86Y56 855 aa16.94■□□□□ 0.3
APP-208ENST00000439274 SCFD1Q8WVM8 642 aa16.94■□□□□ 0.3
APP-208ENST00000439274 IFT81Q8WYA0 676 aa16.94■□□□□ 0.3
APP-208ENST00000439274 CUL5Q93034 780 aa16.94■□□□□ 0.3
APP-208ENST00000439274 FAM163AQ96GL9 167 aaPredicted RBP16.94■□□□□ 0.3
APP-208ENST00000439274 CAPS2Q9BXY5 557 aa16.94■□□□□ 0.3
APP-208ENST00000439274 ZHX3Q9H4I2 956 aa16.94■□□□□ 0.3
APP-208ENST00000439274 POLD4Q9HCU8 107 aa16.94■□□□□ 0.3
APP-208ENST00000439274 ADAMTS1Q9UHI8 967 aa16.94■□□□□ 0.3
APP-208ENST00000439274 PCDHA2Q9Y5H9 948 aa16.94■□□□□ 0.3
APP-208ENST00000439274 MYH7BA7E2Y1 1941 aa16.94■□□□□ 0.3
APP-208ENST00000439274 IGKV6D-41A0A0C4DH26 115 aa16.94■□□□□ 0.3
APP-208ENST00000439274 USP17L15C9J2P7 530 aa16.94■□□□□ 0.3
APP-208ENST00000439274 USP17L13C9JLJ4 530 aa16.94■□□□□ 0.3
APP-208ENST00000439274 USP17L11C9JVI0 530 aa16.94■□□□□ 0.3
APP-208ENST00000439274 USP17L18D6R9N7 530 aa16.94■□□□□ 0.3
APP-208ENST00000439274 USP17L22D6RA61 530 aa16.94■□□□□ 0.3
APP-208ENST00000439274 USP17L17D6RBQ6 530 aa16.94■□□□□ 0.3
APP-208ENST00000439274 USP17L19D6RCP7 530 aa16.94■□□□□ 0.3
APP-208ENST00000439274 USP17L20D6RJB6 530 aa16.94■□□□□ 0.3
APP-208ENST00000439274 PLA2G4BP0C869 781 aa16.94■□□□□ 0.3
APP-208ENST00000439274 ATP2B4P23634 1241 aa16.94■□□□□ 0.3
APP-208ENST00000439274 CCT5P48643 541 aa16.94■□□□□ 0.3
APP-208ENST00000439274 CORO7P57737 925 aa16.94■□□□□ 0.3
APP-208ENST00000439274 GTF2IP78347 998 aa16.94■□□□□ 0.3
APP-208ENST00000439274 GUCY2DQ02846 1103 aa16.94■□□□□ 0.3
APP-208ENST00000439274 USP17L24Q0WX57 530 aa16.94■□□□□ 0.3
APP-208ENST00000439274 USP17L6PQ6QN14 398 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms