RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 RASGRF2O14827 1237 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 MAPK13O15264 365 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 KCNQ2O43526 872 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 DRP2Q13474 957 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 RPS6KA2Q15349 733 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 SLFN12Q8IYM2 578 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 SYNE4Q8N205 404 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 EFHD1Q9BUP0 239 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 PTPRUQ92729 1446 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 USP17L3A6NCW0 530 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 USP17L4A6NCW7 530 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 ZBED6P86452 979 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 USP17L1Q7RTZ2 530 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 ARHGEF1Q92888 912 aaKnown RBP16.25■□□□□ 0.19
TSC2-206ENST00000439117 SDCCAG3Q96C92 435 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 EIF2AQ9BY44 585 aaKnown RBP16.25■□□□□ 0.19
TSC2-206ENST00000439117 KLC4Q9NSK0 619 aa16.25■□□□□ 0.19
TSC2-206ENST00000439117 CNGA1P29973 690 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 PLTPP55058 493 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 ACTN3Q08043 901 aaPredicted RBP16.24■□□□□ 0.19
TSC2-206ENST00000439117 ADCY2Q08462 1091 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 DALRD3Q5D0E6 543 aaKnown RBP16.24■□□□□ 0.19
TSC2-206ENST00000439117 OTUD6AQ7L8S5 288 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 LINC00301Q8NCQ3 95 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 NSUN7Q8NE18 718 aaKnown RBP16.24■□□□□ 0.19
TSC2-206ENST00000439117 RAB20Q9NX57 234 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 ADAMTS13Q76LX8 1427 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 APOEP02649 317 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 CHGBP05060 677 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 SLC27A3Q5K4L6 730 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 PDZD8Q8NEN9 1154 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 GLG1Q92896 1179 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 DTNBP1Q96EV8 351 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 MINPP1Q9UNW1 487 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 USP17L8P0C7I0 530 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 MYO1EQ12965 1108 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 TRIM28Q13263 835 aaKnown RBP16.24■□□□□ 0.19
TSC2-206ENST00000439117 DHTKD1Q96HY7 919 aaPredicted RBP16.24■□□□□ 0.19
TSC2-206ENST00000439117 TADA3O75528 432 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 DCTN3O75935 186 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 RCN2Q14257 317 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 GADL1Q6ZQY3 521 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 CNOT6LQ96LI5 555 aaKnown RBP16.24■□□□□ 0.19
TSC2-206ENST00000439117 SLC5A4Q9NY91 659 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 CCPG1Q9ULG6 757 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 NEXMIFQ5QGS0 1516 aa16.24■□□□□ 0.19
TSC2-206ENST00000439117 FMNL1O95466 1100 aaPredicted RBP16.23■□□□□ 0.19
TSC2-206ENST00000439117 LONP1P36776 959 aaKnown RBP16.23■□□□□ 0.19
TSC2-206ENST00000439117 NAA35Q5VZE5 725 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 TBC1D9BQ66K14 1250 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 FMO2Q99518 471 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 CCDC68Q9H2F9 335 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.23■□□□□ 0.19
TSC2-206ENST00000439117 PI4KBQ9UBF8 816 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 DDX25Q9UHL0 483 aaKnown RBP16.23■□□□□ 0.19
TSC2-206ENST00000439117 GMNCA6NCL1 334 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 RASSF10A6NK89 507 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 NBPF26B4DH59 902 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 SLC12A2P55011 1212 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 PTGDRQ13258 359 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 TCP11X2Q5H9J9 407 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 KRT80Q6KB66 452 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 ADAT2Q7Z6V5 191 aaKnown RBP16.23■□□□□ 0.19
TSC2-206ENST00000439117 GPBP1Q86WP2 473 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 PLA2G4DQ86XP0 818 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 NBPF15Q8N660 670 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 ANKRD7Q92527 254 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 RPAP1Q9BWH6 1393 aaPredicted RBP16.23■□□□□ 0.19
TSC2-206ENST00000439117 TTC4O95801 387 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 NAA30Q147X3 362 aaPredicted RBP16.23■□□□□ 0.19
TSC2-206ENST00000439117 SPICE1Q8N0Z3 855 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 STRBPQ96SI9 672 aaKnown RBP16.23■□□□□ 0.19
TSC2-206ENST00000439117 FOXP1Q9H334 677 aaPredicted RBP16.23■□□□□ 0.19
TSC2-206ENST00000439117 CUEDC2Q9H467 287 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 ZSWIM5Q9P217 1185 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 PCDHB13Q9Y5F0 798 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 SH2B2O14492 632 aaPredicted RBP16.23■□□□□ 0.19
TSC2-206ENST00000439117 ESRRAP11474 423 aaPredicted RBP16.23■□□□□ 0.19
TSC2-206ENST00000439117 ELF1P32519 619 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 RANBP1P43487 201 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 NECTIN1Q15223 517 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 ELAC2Q9BQ52 826 aaKnown RBP16.23■□□□□ 0.19
TSC2-206ENST00000439117 IRAK4Q9NWZ3 460 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 CARMIL3Q8ND23 1372 aa16.23■□□□□ 0.19
TSC2-206ENST00000439117 ANO9A1A5B4 782 aa16.22■□□□□ 0.19
TSC2-206ENST00000439117 SUPT20HL1Q3ZLR7 823 aa16.22■□□□□ 0.19
TSC2-206ENST00000439117 NUGGCQ68CJ6 796 aa16.22■□□□□ 0.19
TSC2-206ENST00000439117 LRGUKQ96M69 825 aa16.22■□□□□ 0.19
TSC2-206ENST00000439117 GPR101Q96P66 508 aaPredicted RBP16.22■□□□□ 0.19
TSC2-206ENST00000439117 IWS1Q96ST2 819 aa16.22■□□□□ 0.19
TSC2-206ENST00000439117 POC1B-GALNT4F8VUJ3 575 aa16.22■□□□□ 0.19
TSC2-206ENST00000439117 N4BP1O75113 896 aaKnown RBP16.22■□□□□ 0.19
TSC2-206ENST00000439117 LMNB1P20700 586 aa16.22■□□□□ 0.19
TSC2-206ENST00000439117 GGCXP38435 758 aa16.22■□□□□ 0.19
TSC2-206ENST00000439117 TRAPPC10P48553 1259 aa16.22■□□□□ 0.19
TSC2-206ENST00000439117 KRT26Q7Z3Y9 468 aa16.22■□□□□ 0.19
TSC2-206ENST00000439117 ZC3H18Q86VM9 953 aaKnown RBP16.22■□□□□ 0.19
TSC2-206ENST00000439117 PACSIN2Q9UNF0 486 aaPredicted RBP16.22■□□□□ 0.19
TSC2-206ENST00000439117 NRKQ7Z2Y5 1582 aa16.22■□□□□ 0.19
TSC2-206ENST00000439117 CCDC188H7C350 402 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms