RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 SPATA33Q96N06 139 aa19.21■□□□□ 0.67
TARDBP-203ENST00000439080 FOXP1Q9H334 677 aaPredicted RBP19.21■□□□□ 0.67
TARDBP-203ENST00000439080 BCAS3Q9H6U6 928 aa19.21■□□□□ 0.67
TARDBP-203ENST00000439080 MLXIPQ9HAP2 919 aa19.21■□□□□ 0.67
TARDBP-203ENST00000439080 KIF28PB7ZC32 967 aa19.2■□□□□ 0.66
TARDBP-203ENST00000439080 ZEB2O60315 1214 aa19.2■□□□□ 0.66
TARDBP-203ENST00000439080 RGS19P49795 217 aa19.2■□□□□ 0.66
TARDBP-203ENST00000439080 ITGB3BPQ13352 177 aaPredicted RBP19.2■□□□□ 0.66
TARDBP-203ENST00000439080 HSDL1Q3SXM5 330 aa19.2■□□□□ 0.66
TARDBP-203ENST00000439080 MOXD1Q6UVY6 613 aa19.2■□□□□ 0.66
TARDBP-203ENST00000439080 GIMAP8Q8ND71 665 aaPredicted RBP19.2■□□□□ 0.66
TARDBP-203ENST00000439080 SENP6Q9GZR1 1112 aaPredicted RBP19.2■□□□□ 0.66
TARDBP-203ENST00000439080 MYL3P08590 195 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 SP4Q02446 784 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 LARP1BQ659C4 914 aaKnown RBP19.19■□□□□ 0.66
TARDBP-203ENST00000439080 CXCL17Q6UXB2 119 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 NOSTRINQ8IVI9 506 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 ZNF577Q9BSK1 485 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 JPH1Q9HDC5 661 aaPredicted RBP19.19■□□□□ 0.66
TARDBP-203ENST00000439080 NFASCO94856 1347 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 CYP3A7-CYP3A51PA0A087WV96 503 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 IPO5O00410 1097 aaKnown RBP19.19■□□□□ 0.66
TARDBP-203ENST00000439080 NOP56O00567 594 aaKnown RBP19.19■□□□□ 0.66
TARDBP-203ENST00000439080 SLC37A4O43826 429 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 CCNT1O60563 726 aaKnown RBP19.19■□□□□ 0.66
TARDBP-203ENST00000439080 HSP90AA1P07900 732 aaKnown RBP19.19■□□□□ 0.66
TARDBP-203ENST00000439080 CYP3A7P24462 503 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 PURAQ00577 322 aaKnown RBP19.19■□□□□ 0.66
TARDBP-203ENST00000439080 Q4G0T1 1027 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 GLT1D1Q96MS3 346 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 MBOAT7Q96N66 472 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 UIMC1Q96RL1 719 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 SDF4Q9BRK5 362 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 STARD7Q9NQZ5 370 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 POLR3EQ9NVU0 708 aa19.19■□□□□ 0.66
TARDBP-203ENST00000439080 DDX25Q9UHL0 483 aaKnown RBP19.19■□□□□ 0.66
TARDBP-203ENST00000439080 ZNF286BP0CG31 522 aa19.18■□□□□ 0.66
TARDBP-203ENST00000439080 HOXD8P13378 290 aaPredicted RBP19.18■□□□□ 0.66
TARDBP-203ENST00000439080 GCFC2P16383 781 aaKnown RBP19.18■□□□□ 0.66
TARDBP-203ENST00000439080 PDCP20941 246 aa19.18■□□□□ 0.66
TARDBP-203ENST00000439080 U2AF2P26368 475 aaKnown RBP eCLIP19.18■□□□□ 0.663e-10■□□□□ 10
TARDBP-203ENST00000439080 DGKDQ16760 1214 aa19.18■□□□□ 0.66
TARDBP-203ENST00000439080 MCTP1Q6DN14 999 aa19.18■□□□□ 0.66
TARDBP-203ENST00000439080 PPP4R3AQ6IN85 833 aa19.18■□□□□ 0.66
TARDBP-203ENST00000439080 NAP1L4Q99733 375 aaKnown RBP19.18■□□□□ 0.66
TARDBP-203ENST00000439080 TELO2Q9Y4R8 837 aa19.18■□□□□ 0.66
TARDBP-203ENST00000439080 VPS37CA5D8V6 355 aaPredicted RBP19.17■□□□□ 0.66
TARDBP-203ENST00000439080 DDX39AO00148 427 aaKnown RBP19.17■□□□□ 0.66
TARDBP-203ENST00000439080 WNT7AO00755 349 aa19.17■□□□□ 0.66
TARDBP-203ENST00000439080 MSH4O15457 936 aa19.17■□□□□ 0.66
TARDBP-203ENST00000439080 ATN1P54259 1190 aaPredicted RBP19.17■□□□□ 0.66
TARDBP-203ENST00000439080 GPR20Q99678 358 aa19.17■□□□□ 0.66
TARDBP-203ENST00000439080 MTG1Q9BT17 334 aaPredicted RBP19.17■□□□□ 0.66
TARDBP-203ENST00000439080 SLC9A2Q9UBY0 812 aa19.17■□□□□ 0.66
TARDBP-203ENST00000439080 MYH9P35579 1960 aaKnown RBP19.16■□□□□ 0.66
TARDBP-203ENST00000439080 KPNA6O60684 536 aa19.16■□□□□ 0.66
TARDBP-203ENST00000439080 CABYRO75952 493 aa19.16■□□□□ 0.66
TARDBP-203ENST00000439080 LRRC26Q2I0M4 334 aa19.16■□□□□ 0.66
TARDBP-203ENST00000439080 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
TARDBP-203ENST00000439080 ETNPPLQ8TBG4 499 aa19.16■□□□□ 0.66
TARDBP-203ENST00000439080 HTATIP2Q9BUP3 242 aa19.16■□□□□ 0.66
TARDBP-203ENST00000439080 ELP1O95163 1332 aa19.16■□□□□ 0.66
TARDBP-203ENST00000439080 SYT1P21579 422 aa19.15■□□□□ 0.66
TARDBP-203ENST00000439080 PSMC6P62333 389 aa19.15■□□□□ 0.66
TARDBP-203ENST00000439080 SNX17Q15036 470 aa19.15■□□□□ 0.66
TARDBP-203ENST00000439080 SLC39A5Q6ZMH5 540 aa19.15■□□□□ 0.66
TARDBP-203ENST00000439080 SLC5A5Q92911 643 aa19.15■□□□□ 0.66
TARDBP-203ENST00000439080 GJA10Q969M2 543 aa19.15■□□□□ 0.66
TARDBP-203ENST00000439080 VTI1AQ96AJ9 217 aa19.15■□□□□ 0.66
TARDBP-203ENST00000439080 TBC1D22BQ9NU19 505 aa19.15■□□□□ 0.66
TARDBP-203ENST00000439080 NOL7Q9UMY1 257 aaKnown RBP19.15■□□□□ 0.66
TARDBP-203ENST00000439080 A0A0U1RQG5 324 aaPredicted RBP19.14■□□□□ 0.65
TARDBP-203ENST00000439080 DHX15O43143 795 aaKnown RBP19.14■□□□□ 0.65
TARDBP-203ENST00000439080 F2P00734 622 aa19.14■□□□□ 0.65
TARDBP-203ENST00000439080 LGALS2P05162 132 aa19.14■□□□□ 0.65
TARDBP-203ENST00000439080 ATP2B1P20020 1258 aa19.14■□□□□ 0.65
TARDBP-203ENST00000439080 TCF7P36402 384 aaPredicted RBP19.14■□□□□ 0.65
TARDBP-203ENST00000439080 BECN1Q14457 450 aa19.14■□□□□ 0.65
TARDBP-203ENST00000439080 LRCH2Q5VUJ6 765 aa19.14■□□□□ 0.65
TARDBP-203ENST00000439080 SPRYD3Q8NCJ5 442 aa19.14■□□□□ 0.65
TARDBP-203ENST00000439080 KCNMB3Q9NPA1 279 aa19.14■□□□□ 0.65
TARDBP-203ENST00000439080 TCEAL9Q9UHQ7 104 aa19.14■□□□□ 0.65
TARDBP-203ENST00000439080 LTBP2Q14767 1821 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 NEMFO60524 1076 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 GAS7O60861 476 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 PPFIA4O75335 1185 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 CCNE2O96020 404 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 TRAPPC10P48553 1259 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 RTP1P59025 263 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 ACTR2P61160 394 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 MLLT1Q03111 559 aaPredicted RBP19.13■□□□□ 0.65
TARDBP-203ENST00000439080 TRIM60Q495X7 471 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 TRIM50Q86XT4 487 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 KAT2BQ92831 832 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 RIT2Q99578 217 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 KATNAL1Q9BW62 490 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 TEKT3Q9BXF9 490 aa19.13■□□□□ 0.65
TARDBP-203ENST00000439080 GRIN2DO15399 1336 aa19.12■□□□□ 0.65
TARDBP-203ENST00000439080 GSTTP1A0A1W2PQM5 241 aa19.12■□□□□ 0.65
TARDBP-203ENST00000439080 MCM7P33993 719 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms