RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 LENG1Q96BZ8 264 aaPredicted RBP16.65■□□□□ 0.26
SKA2-202ENST00000437036 SPATA33Q96N06 139 aa16.65■□□□□ 0.26
SKA2-202ENST00000437036 RIT2Q99578 217 aa16.65■□□□□ 0.26
SKA2-202ENST00000437036 PCDHB6Q9Y5E3 794 aa16.65■□□□□ 0.26
SKA2-202ENST00000437036 LAD1O00515 517 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 ADCY6O43306 1168 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 GAS7O60861 476 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 ATP9AO75110 1047 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 SGPL1O95470 568 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 MYCNP04198 464 aaPredicted RBP16.64■□□□□ 0.25
SKA2-202ENST00000437036 C6orf222P0C671 652 aaPredicted RBP16.64■□□□□ 0.25
SKA2-202ENST00000437036 DDIT3P35638 169 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 ARHGAP1Q07960 439 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 TMEM63BQ5T3F8 832 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 GJC2Q5T442 439 aaPredicted RBP16.64■□□□□ 0.25
SKA2-202ENST00000437036 LRCH2Q5VUJ6 765 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 ETNPPLQ8TBG4 499 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 U2AF1L4Q8WU68 220 aaKnown RBP16.64■□□□□ 0.25
SKA2-202ENST00000437036 SLC5A5Q92911 643 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 TEKT3Q9BXF9 490 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 UPF3AQ9H1J1 476 aaKnown RBP16.64■□□□□ 0.25
SKA2-202ENST00000437036 JPH1Q9HDC5 661 aaPredicted RBP16.64■□□□□ 0.25
SKA2-202ENST00000437036 KCNMB3Q9NPA1 279 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.64■□□□□ 0.25
SKA2-202ENST00000437036 KIAA1217Q5T5P2 1943 aa16.64■□□□□ 0.25
SKA2-202ENST00000437036 WNT7AO00755 349 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 SORBS3O60504 671 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 FARP2O94887 1054 aaPredicted RBP16.63■□□□□ 0.25
SKA2-202ENST00000437036 PGK1P00558 417 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 OR52Z1P0C646 297 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 GJA8P48165 433 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 KRT76Q01546 638 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 ITGB3BPQ13352 177 aaPredicted RBP16.63■□□□□ 0.25
SKA2-202ENST00000437036 NBR1Q14596 966 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 FSCN1Q16658 493 aaKnown RBP16.63■□□□□ 0.25
SKA2-202ENST00000437036 GNASQ5JWF2 1037 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 ATL3Q6DD88 541 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 PCSK9Q8NBP7 692 aaKnown RBP16.63■□□□□ 0.25
SKA2-202ENST00000437036 PPTC7Q8NI37 304 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 AFG1LQ8WV93 481 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 ABHD8Q96I13 439 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 CHMP5Q9NZZ3 219 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 SLC9A2Q9UBY0 812 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 OGDHLQ9ULD0 1010 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 SYNRGQ9UMZ2 1314 aa16.63■□□□□ 0.25
SKA2-202ENST00000437036 KBTBD13C9JR72 458 aa16.62■□□□□ 0.25
SKA2-202ENST00000437036 DDX39AO00148 427 aaKnown RBP16.62■□□□□ 0.25
SKA2-202ENST00000437036 KPNA6O60684 536 aa16.62■□□□□ 0.25
SKA2-202ENST00000437036 NKX3-2P78367 333 aa16.62■□□□□ 0.25
SKA2-202ENST00000437036 SP4Q02446 784 aa16.62■□□□□ 0.25
SKA2-202ENST00000437036 PTGDRQ13258 359 aa16.62■□□□□ 0.25
SKA2-202ENST00000437036 TMEM266Q2M3C6 531 aa16.62■□□□□ 0.25
SKA2-202ENST00000437036 FAM173BQ6P4H8 233 aa16.62■□□□□ 0.25
SKA2-202ENST00000437036 SEPT1Q8WYJ6 367 aa16.62■□□□□ 0.25
SKA2-202ENST00000437036 CRISPLD2Q9H0B8 497 aa16.62■□□□□ 0.25
SKA2-202ENST00000437036 CFAP45Q9UL16 551 aa16.62■□□□□ 0.25
SKA2-202ENST00000437036 PCDHA12Q9UN75 941 aa16.62■□□□□ 0.25
SKA2-202ENST00000437036 ZDHHC9Q9Y397 364 aa16.62■□□□□ 0.25
SKA2-202ENST00000437036 A6NJR5 290 aa16.61■□□□□ 0.25
SKA2-202ENST00000437036 DHX15O43143 795 aaKnown RBP16.61■□□□□ 0.25
SKA2-202ENST00000437036 ADAMTS4O75173 837 aa16.61■□□□□ 0.25
SKA2-202ENST00000437036 PSMD10O75832 226 aa16.61■□□□□ 0.25
SKA2-202ENST00000437036 CST5P28325 142 aaPredicted RBP16.61■□□□□ 0.25
SKA2-202ENST00000437036 TXKP42681 527 aa16.61■□□□□ 0.25
SKA2-202ENST00000437036 LRRC41Q15345 812 aa16.61■□□□□ 0.25
SKA2-202ENST00000437036 SF3A1Q15459 793 aaKnown RBP16.61■□□□□ 0.25
SKA2-202ENST00000437036 DGKDQ16760 1214 aa16.61■□□□□ 0.25
SKA2-202ENST00000437036 ZNF746Q6NUN9 644 aaPredicted RBP16.61■□□□□ 0.25
SKA2-202ENST00000437036 KLHDC9Q8NEP7 349 aa16.61■□□□□ 0.25
SKA2-202ENST00000437036 HAS1Q92839 578 aa16.61■□□□□ 0.25
SKA2-202ENST00000437036 MTMR9Q96QG7 549 aa16.61■□□□□ 0.25
SKA2-202ENST00000437036 TSEN34Q9BSV6 310 aaKnown RBP16.61■□□□□ 0.25
SKA2-202ENST00000437036 RAB34Q9BZG1 259 aa16.61■□□□□ 0.25
SKA2-202ENST00000437036 TMEM60Q9H2L4 133 aa16.61■□□□□ 0.25
SKA2-202ENST00000437036 POLR3EQ9NVU0 708 aa16.61■□□□□ 0.25
SKA2-202ENST00000437036 WDR64B1ANS9 1081 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 DNM1LO00429 736 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 PPFIA4O75335 1185 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 PTGS1P23219 599 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 SFNP31947 248 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 PRPHP41219 470 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 HSDL1Q3SXM5 330 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 FOXD4L6Q3SYB3 417 aaPredicted RBP16.6■□□□□ 0.25
SKA2-202ENST00000437036 MIS18BP1Q6P0N0 1132 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 FOXD4L3Q6VB84 417 aaPredicted RBP16.6■□□□□ 0.25
SKA2-202ENST00000437036 DTHD1Q6ZMT9 781 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 SMAP1Q8IYB5 467 aaPredicted RBP16.6■□□□□ 0.25
SKA2-202ENST00000437036 ANKLE1Q8NAG6 615 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 RDM1Q8NG50 284 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 GPR20Q99678 358 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 BCAS3Q9H6U6 928 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 TTC12Q9H892 705 aaPredicted RBP16.6■□□□□ 0.25
SKA2-202ENST00000437036 SAMM50Q9Y512 469 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 ELP1O95163 1332 aa16.6■□□□□ 0.25
SKA2-202ENST00000437036 MOXD2PA6NHM9 499 aa16.59■□□□□ 0.25
SKA2-202ENST00000437036 CHMP2AO43633 222 aa16.59■□□□□ 0.25
SKA2-202ENST00000437036 MMP3P08254 477 aa16.59■□□□□ 0.25
SKA2-202ENST00000437036 MYL3P08590 195 aa16.59■□□□□ 0.25
SKA2-202ENST00000437036 JAK3P52333 1124 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms